Gene

KWMTBOMO12705

Pre Gene Modal

BGIBMGA001601

Annotation

PREDICTED:_organic_cation_transporter_protein-like_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr21(+):12614212-12628148      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.971

CDS

ATGGACACTCTAGTTACGATGCCCACAGGCTGTTTTGCTATTATTTTCAATGATTATCCTCTTTTTCAGTTCGACCTAGCCTGCCAGGATTGGAAGCGCTCACTGGTGGGCACCGTCCACAATGCCGGCTTCTTCATATCGATTCCACTGACCGGACTGATATCGGACAAGTACGGCCGGCGGCCCGCGATCGTGTTCGCTTCGGTCGCGAACGGCGTGTTCGGCATAATACGAGCCTTGTCCGTTAATTACAACATGTTCGTTATATTCGAATTCCTAGAGCCGGCGATCGGCGGTGGCGCTTACACGGCTTGCTTTGTTCTCGCATTGGAATTGGTCGGTCCCAAAGGCCGAGTCTTCGTCAGTCTGCTATTTAACACCATGTTCATCCTCGGGGGAGTGGCAGTGACTCTGCTGTCGTGGTGGCTCCAAAACTGGAGGTACCTCCTCTTCATCATCTACACACCAGCTGTCCTAGTGTTCGTTTATATCTGGACTCTAACGGAGAGCTTCAGGTGGTTGTTCAGCAAAGGACTATATAATGAAGGCTTGGATGTTCTCGCGAAATCGGAGAGGCTTAACAAAGTCTTCGTGCCAAAAGACCATTACGAGCAAGTCGAGAAACACGCCACAAAACAACGTGACGACAGAAAATGCGAATCTATGGCCAGGAATCAGTCAACCTTCAAGCAACTGCTTTCATCAAAAATCATATGGAAAAGACTATTCACTTGTTCTTTCCTGTGGACCTCGTCTACTCTAGTGTATTATGGATTATCTATAAACGCTATAGAACTATCGGGGAATAGTTACTTAAATTATATAGTTGTGCTGGTGATCGAAGCTCCCGCAAATGTTTGCAAGTTGATATTCCTGGACAGATTCGGAAGGAAAAGAGTTATTGCGGTTGCTTTTCTGATGACTGGATTGATTCTTATCAACTATGGATTTGTCCCCTCGGGCAACTGGTCGATACTACTGTATCTCGGTGGAAAGTTCTTCATCACGCTCGCATACAACTCTCTGTACGTGTTCGCCGCTGAGGTCTTCCCGACCAACTACAGAACTACGCTGATGGCGATGTGCTCAACGCTTGGAAGGACCGGTTCCACTGTGGCCCCCCAAACACCGTTATTGACGAGATACTACGAATACCTCCCGACGTTGTTGTTCGGGAGCATGGCCGCCATATCAGGGATCCTGGTCCTCACGTTACCAGAGACAAACAACCAGAAGCTGCCTGATTCGTTGAAAGAAGCTCAGGAGCAAGAGAGCCAGCCTCAGGAGCCGTCAAACGAAAGGAGTAATGACACAAAAACAAGACTTTGA

Protein

MDTLVTMPTGCFAIIFNDYPLFQFDLACQDWKRSLVGTVHNAGFFISIPLTGLISDKYGRRPAIVFASVANGVFGIIRALSVNYNMFVIFEFLEPAIGGGAYTACFVLALELVGPKGRVFVSLLFNTMFILGGVAVTLLSWWLQNWRYLLFIIYTPAVLVFVYIWTLTESFRWLFSKGLYNEGLDVLAKSERLNKVFVPKDHYEQVEKHATKQRDDRKCESMARNQSTFKQLLSSKIIWKRLFTCSFLWTSSTLVYYGLSINAIELSGNSYLNYIVVLVIEAPANVCKLIFLDRFGRKRVIAVAFLMTGLILINYGFVPSGNWSILLYLGGKFFITLAYNSLYVFAAEVFPTNYRTTLMAMCSTLGRTGSTVAPQTPLLTRYYEYLPTLLFGSMAAISGILVLTLPETNNQKLPDSLKEAQEQESQPQEPSNERSNDTKTRL

Uniprot

A0A2A4JU15   A0A2H1VDM1   A0A2H1W2A4   A0A437B2S9   A0A0N1PI45   A0A194QI00   + More
A0A212ERF4   H9IWG9   A0A0L7LPX0   H9IWG7   A0A2H1V1L3   A0A2A4J455   A0A2A4J5Q3   A0A3S2NDN7   A0A212FPC5   A0A194REW9   A0A194QDP3   A0A194QC06   A0A0L7LKI8   A0A194QC91   A0A194RIS2   A0A212F2Q3   A0A2H1VFS1   A0A3S2L3J0   A0A2A4JC88   A0A3S2NA23   A0A2J7RPY0   A0A2J7RPY7   A0A0L7KUG4   A0A2A4JBT3   A0A2H1V9B3   A0A067RGL9   A0A067RSY2   A0A2A4K6M9   A0A2J7RPZ7   A0A3S2M6B8   A0A3S2NIQ2   A0A1B6D578   A0A212EJ20   A0A2A4K5P1   A0A2A4K7E3   A0A2A4K5R4   A0A2A4J6J0   A0A194RF43   A0A2H1VA76   A0A2W1BRJ1   A0A3S2TCP3   A0A026W5E8   A0A194PSH8   A0A3L8D7U5   A0A212EJ24   A0A084WCB2   A0A195E542   A0A195DF58   A0A154PCE9   A0A194PT22   A0A2J7RPY5   A0A023ETG7   B0XDE9   A0A182GYP2   A0A151WZG1   A0A195CVD4   A0A3S2L9U7   A0A0L7RIG1   A0A158NQD1   A0A182V3C2   A0A182U8X5   A0A1I8MQZ5   A0A2W1BMH3   A0A0L0CC92   E2A7K4   A0A0J9URD0   B4IAX7   Q16WK7   A0A2A4K5Q2   A0A195D353   B0XDF0   B0XDF1   A0A2J7RPY4   A0A2H1V9D8   A0A182KSD5   A0A0L7KV39   Q9VNW8   A0A182Y1J3   A0A182SYI8   A0A212EMB5   A0A2H1V9G0   B3MAJ1   A0A437AVL7   A0A0K8VUC5   Q7Q0C3   A0A212F123   A0A0K8VEY5   H9JI54   A0A0K8UFN6   A0A0K8UAY5   A0A0L7KTQ3   A0A2S2Q3B7  

Pubmed

26354079    22118469    19121390    26227816    24845553    28756777    + More
24508170    30249741    24438588    24945155    26483478    21347285    25315136    26108605    20798317    22936249    17994087    17510324    20966253    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25244985    12364791    14747013    17210077   

EMBL

NWSH01000587    PCG75491.1    ODYU01001802    SOQ38502.1    ODYU01005874    SOQ47209.1    + More
RSAL01000186    RVE44801.1    KQ459762    KPJ20130.1    KQ459193    KPJ03081.1    AGBW02013021    OWR44080.1    BABH01006656    JTDY01000357    KOB77563.1    BABH01006647    ODYU01000079    SOQ34232.1    NWSH01003151    PCG66855.1    PCG66854.1    RVE44804.1    AGBW02003000    OWR55596.1    KQ460325    KPJ15840.1    KPJ03085.1    KPJ03083.1    JTDY01000842    KOB75696.1    KPJ03082.1    KPJ15841.1    AGBW02010692    OWR48028.1    ODYU01002328    SOQ39679.1    RVE44802.1    NWSH01002161    PCG69013.1    RSAL01000360    RVE42197.1    NEVH01001354    PNF42891.1    PNF42889.1    JTDY01005496    KOB66937.1    PCG69014.1    ODYU01001366    SOQ37440.1    KK852482    KDR22927.1    KDR22929.1    NWSH01000100    PCG79564.1    PNF42898.1    RSAL01000027    RVE51971.1    RSAL01000974    RVE41008.1    GEDC01016480    GEDC01008507    JAS20818.1    JAS28791.1    AGBW02014542    OWR41475.1    PCG79565.1    PCG79570.1    PCG79571.1    NWSH01002815    PCG67489.1    KQ460313    KPJ16069.1    ODYU01001220    SOQ37134.1    KZ149964    PZC76264.1    RVE42200.1    KK107403    EZA51300.1    KQ459595    KPI95923.1    QOIP01000011    RLU16525.1    OWR41479.1    ATLV01022651    KE525335    KFB47856.1    KQ979657    KYN19974.1    KQ980905    KYN11533.1    KQ434870    KZC09576.1    KPI95914.1    PNF42894.1    GAPW01001000    JAC12598.1    DS232756    EDS45427.1    JXUM01021216    KQ560594    KXJ81736.1    KQ982639    KYQ53259.1    KQ977259    KYN04595.1    RVE42203.1    KQ414585    KOC70516.1    ADTU01001734    PZC76259.1    JRES01000704    KNC29064.1    GL437348    EFN70576.1    CM002912    KMZ01136.1    CH480826    EDW44440.1    CH477563    EAT38951.1    PCG79557.1    KQ976885    KYN07327.1    EDS45428.1    EDS45429.1    PNF42897.1    SOQ37439.1    KOB66936.1    AE014296    BT150232    AAF51797.3    AGU12793.1    AGBW02013857    OWR42632.1    SOQ37441.1    CH902618    EDV41278.1    RVE42199.1    GDHF01009833    JAI42481.1    AAAB01008986    EAA00192.3    AGBW02010973    OWR47448.1    GDHF01014878    JAI37436.1    BABH01041118    BABH01041119    GDHF01026931    GDHF01013660    GDHF01009296    JAI25383.1    JAI38654.1    JAI43018.1    GDHF01028477    JAI23837.1    JTDY01005909    KOB66490.1    GGMS01002509    MBY71712.1   

Proteomes

UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    UP000005204    + More
UP000037510    UP000235965    UP000027135    UP000053097    UP000279307    UP000030765    UP000078492    UP000076502    UP000002320    UP000069940    UP000249989    UP000075809    UP000078542    UP000053825    UP000005205    UP000075903    UP000075902    UP000095301    UP000037069    UP000000311    UP000001292    UP000008820    UP000075882    UP000000803    UP000076408    UP000075901    UP000007801    UP000007062   

PRIDE

H9IWG9    H9IWG7    Q9VNW8    H9JI54   

Pfam

PF00083   Sugar_tr        + More
PF07690   MFS_1

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       
IPR036259   MFS_trans_sf       
IPR011701   MFS       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

A0A2A4JU15   A0A2H1VDM1   A0A2H1W2A4   A0A437B2S9   A0A0N1PI45   A0A194QI00   + More
A0A212ERF4   H9IWG9   A0A0L7LPX0   H9IWG7   A0A2H1V1L3   A0A2A4J455   A0A2A4J5Q3   A0A3S2NDN7   A0A212FPC5   A0A194REW9   A0A194QDP3   A0A194QC06   A0A0L7LKI8   A0A194QC91   A0A194RIS2   A0A212F2Q3   A0A2H1VFS1   A0A3S2L3J0   A0A2A4JC88   A0A3S2NA23   A0A2J7RPY0   A0A2J7RPY7   A0A0L7KUG4   A0A2A4JBT3   A0A2H1V9B3   A0A067RGL9   A0A067RSY2   A0A2A4K6M9   A0A2J7RPZ7   A0A3S2M6B8   A0A3S2NIQ2   A0A1B6D578   A0A212EJ20   A0A2A4K5P1   A0A2A4K7E3   A0A2A4K5R4   A0A2A4J6J0   A0A194RF43   A0A2H1VA76   A0A2W1BRJ1   A0A3S2TCP3   A0A026W5E8   A0A194PSH8   A0A3L8D7U5   A0A212EJ24   A0A084WCB2   A0A195E542   A0A195DF58   A0A154PCE9   A0A194PT22   A0A2J7RPY5   A0A023ETG7   B0XDE9   A0A182GYP2   A0A151WZG1   A0A195CVD4   A0A3S2L9U7   A0A0L7RIG1   A0A158NQD1   A0A182V3C2   A0A182U8X5   A0A1I8MQZ5   A0A2W1BMH3   A0A0L0CC92   E2A7K4   A0A0J9URD0   B4IAX7   Q16WK7   A0A2A4K5Q2   A0A195D353   B0XDF0   B0XDF1   A0A2J7RPY4   A0A2H1V9D8   A0A182KSD5   A0A0L7KV39   Q9VNW8   A0A182Y1J3   A0A182SYI8   A0A212EMB5   A0A2H1V9G0   B3MAJ1   A0A437AVL7   A0A0K8VUC5   Q7Q0C3   A0A212F123   A0A0K8VEY5   H9JI54   A0A0K8UFN6   A0A0K8UAY5   A0A0L7KTQ3   A0A2S2Q3B7  

PDB

4LDS     E-value=2.10289e-06,     Score=124

KEGG

101735562    no KO assigned | (RefSeq) organic cation transporter protein-like

GO

GO:0016021   GO:0022857   GO:0005215   GO:0055085   GO:0005634   GO:0008270   GO:0043565   GO:0003677   GO:0004879   GO:0003707   GO:0016286  

Length:

442

Number of predicted TMHs:

9

Exp number of AAs in TMHs:

202.62887

Exp number, first 60 AAs:

15.78518

Total prob of N-in:

0.36756

POSSIBLE N-term signal

sequence

inside

1  -  62

TMhelix

63  -  82

outside

83  -  91

TMhelix

92  -  114

inside

115  -  120

TMhelix

121  -  143

outside

144  -  147

TMhelix

148  -  167

inside

168  -  237

TMhelix

238  -  260

outside

261  -  269

TMhelix

270  -  292

inside

293  -  298

TMhelix

299  -  321

outside

322  -  324

TMhelix

325  -  347

inside

348  -  382

TMhelix

383  -  405

outside

406  -  442

 

 

Pi

22.794833

Theta

23.545053

Tajima's D

-0.602709

CLR

0.817062

CSRT

0.215789210539473

Interpretation

Uncertain