Gene

KWMTBOMO12704

Pre Gene Modal

BGIBMGA001600

Annotation

PREDICTED:_organic_cation_transporter_protein-like_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr21(+):12524983-12576486      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.954

CDS

ATGGAGGAAGGCAAGAAAGAAATCAATTTAGATTCGATACTGGAGAGCTTGGGTCCGTACGGGCGCTACAATTTACTGAATTTCGTGCTCCTACTGTACCCGGTCCTGCTGAGCAGCTTCTTCGAGTGCGGCTTTATATTCGAGGCTCAGGAACAGAATTACAGATGCGAAGTAGACGGTTGCGAGTTAAGGTTTAATGATACATCCTGGCTGCAGTACGCTATCCCGCTGGACGTGGAGAAACAGCGTCCTCAATCCTGCTTCATGTACCAGCAAGCAAACGTTACGAGTCAGCAGTGTTTGCCTGAAGACTTCATCAATAAAACTGTGCCTTGCGAGAGATTTGTTTACGAAAACGATTATTCTTTTGTCAAAGAGTTCAACCTTGTCTGCCAAGAATGGAAACGAGCGCTAGTCGGAACCATCCATAATTCTGGAATGTTTGTGGCCATGCTGTTCACTGGAGCCATATCGGATAGGTTCGGGAGGAAAGTTGCTGTAGGGTTTTCTTCCTGCGCAAGTTTCATATTCGGATTCGCTCGATCTTTCTCGCCGAGCTATCTGTTTTTCGTTGCCATGCATTTCCTGGAGGCTGGTTTCGGCGGAGGACTCTACCCTTCAGCTTATGTTTTCATTGTGGAACTGGTTGGCCTCAAGCAACGGGTCATCGTGTCGGCCATGTGCAACATGACCTTCGTTATCGGCGTCGTTCTCATAGCCCTTCTGGCCTGGGCTGTAAACAACTGGAGGACATACATCCTTATCCTCTACTGCCCCGCCACAATCGTCTTCGTATACGTTTGGTTTATGAACGAAAGCGCGCGCTGGCTTCTCAGCAAAGGACGAAGGGACGAAGCAATTGACGTACTGAAACGCGCCGCCAAGATCAACAATCTAGACCCGAGGAGTCTGGATCTAGATGCGCTCGGAGATCCCCTGCTGAAACCGCAGAACCAAACCGGAGACAAAAAGTCTCAGATGTACAAGGCCATCAGATCTGGTATAATATGGAAACGGGTCGCGATTTGCTCGTTTCTATGGATGACGTGTTCCCTAGTGTACTATGGTTTTTCCATTAATTCGGTTTCATTAAGTAGCAACAGATACGTTAGCTTCATGCTCGTGACGTTAGTGGAGATACCTGCCTATATTGTGGTAGTCATCGTGCTGGATAAATACGGGAGGAAGAAAACTTTATTGACGACTTATCTAACTTGTACGGTCATGAGTTTGCTGTTCGCTTTCTTGCCAAGATCTGATTACTGGTCGATACCCCTGTATCTAGTTGGGAAGTGGAGCGTCACATTAGCCTACAGTTCCGTCTATATCTACGTGTCGGAAGTCTTCCCTACTAACATGAGGCAGACTCTGATAAGCGTCTGCTCTACAGCTGGAAGGATCGGCTCTCTAATAGCTCCTTTAACGCCACTACTGTCATATTACCACAAATCGATGCCAACTGTGATCTTCGGAGCGATGTGCTTCATATCGAGCACTCTGGTCATGATGCTGCCGGAGACCAGGAACATGAGGCTTCCGGACACGATCGAGGAGGCCGAACACCTCTCCAGAATGAAAAGCAAGAACGGTGATACAACGGACTGA

Protein

MEEGKKEINLDSILESLGPYGRYNLLNFVLLLYPVLLSSFFECGFIFEAQEQNYRCEVDGCELRFNDTSWLQYAIPLDVEKQRPQSCFMYQQANVTSQQCLPEDFINKTVPCERFVYENDYSFVKEFNLVCQEWKRALVGTIHNSGMFVAMLFTGAISDRFGRKVAVGFSSCASFIFGFARSFSPSYLFFVAMHFLEAGFGGGLYPSAYVFIVELVGLKQRVIVSAMCNMTFVIGVVLIALLAWAVNNWRTYILILYCPATIVFVYVWFMNESARWLLSKGRRDEAIDVLKRAAKINNLDPRSLDLDALGDPLLKPQNQTGDKKSQMYKAIRSGIIWKRVAICSFLWMTCSLVYYGFSINSVSLSSNRYVSFMLVTLVEIPAYIVVVIVLDKYGRKKTLLTTYLTCTVMSLLFAFLPRSDYWSIPLYLVGKWSVTLAYSSVYIYVSEVFPTNMRQTLISVCSTAGRIGSLIAPLTPLLSYYHKSMPTVIFGAMCFISSTLVMMLPETRNMRLPDTIEEAEHLSRMKSKNGDTTD

Uniprot

A0A2H1VFS1   A0A2A4JC88   A0A212F2Q3   A0A194QC91   A0A3S2L3J0   A0A194RIS2   + More
A0A2A4JBT3   A0A0L7LQ39   A0A0L7LKI8   A0A194QDP3   A0A212FPC5   A0A3S2NDN7   A0A2H1V1L3   A0A194REW9   A0A2A4J5Q3   A0A437B2S9   A0A0N1PI45   A0A194QI00   H9IWG7   A0A2A4J455   A0A212ERF4   A0A194QC06   A0A2H1V9B3   A0A2H1W2A4   A0A2H1VDM1   A0A2A4JU15   A0A3S2NA23   A0A212EJ20   A0A0L7KUG4   A0A2A4K5P1   A0A3S2NIQ2   A0A3S2M6B8   A0A2H1V9G0   Q16WK7   A0A194PSH8   A0A182GYP2   A0A182SYI8   A0A2A4K7E3   A0A067RSY2   A0A2A4K6M9   B0XDF0   A0A2A4K5R4   A0A182LZQ5   A0A194PT22   A0A2H1VA76   B0XDF1   A0A023ETG7   A0A182Y1J3   A0A084VS25   A0A182FXJ6   A0A2W1BRJ1   H9JI54   A0A182KSD5   U5EVF0   B0XDE9   A0A182QUL1   A0A2J7RPZ7   A0A194RGD2   A0A2J7RPY5   Q7Q0C3   A0A1Y1KD84   D2CG57   A0A2J7RPY7   A0A2H1V9D8   A0A2J7RPY0   A0A182Q0W8   A0A0V0GBF3   A0A212EJ24   A0A3S2TCP3   A0A182TM67   J3JWW6   A0A182Y1J2   A0A194RF43   H9IVN2   A0A1B6D578   A0A2W1BRL6   A0A194PJI6   A0A026W5E8   A0A3L8D7U5   A0A182KSC8   A0A2C9GR79   A0A2A4K5Q3   U5EWC3   A0A154PCE9   A0A182VDY0   A0A2H1VQB3   A0A182RFF8   A0A2A4J6J0   A0A182WEZ8   A0A084WCB2   A0A2M3ZIE3   A0A182WZR9   A0A0L7RIG1   A0A182M3B6   A0A2W1BMH3   A0A182FXJ5   H9JI53   A0A3S2NQS4   A0A0L7KV39  

Pubmed

22118469    26354079    26227816    19121390    17510324    26483478    + More
24845553    24945155    25244985    24438588    28756777    20966253    12364791    14747013    17210077    28004739    18362917    19820115    22516182    23537049    24508170    30249741   

EMBL

ODYU01002328    SOQ39679.1    NWSH01002161    PCG69013.1    AGBW02010692    OWR48028.1    + More
KQ459193    KPJ03082.1    RSAL01000186    RVE44802.1    KQ460325    KPJ15841.1    PCG69014.1    JTDY01000357    KOB77560.1    JTDY01000842    KOB75696.1    KPJ03085.1    AGBW02003000    OWR55596.1    RVE44804.1    ODYU01000079    SOQ34232.1    KPJ15840.1    NWSH01003151    PCG66854.1    RVE44801.1    KQ459762    KPJ20130.1    KPJ03081.1    BABH01006647    PCG66855.1    AGBW02013021    OWR44080.1    KPJ03083.1    ODYU01001366    SOQ37440.1    ODYU01005874    SOQ47209.1    ODYU01001802    SOQ38502.1    NWSH01000587    PCG75491.1    RSAL01000360    RVE42197.1    AGBW02014542    OWR41475.1    JTDY01005496    KOB66937.1    NWSH01000100    PCG79565.1    RSAL01000974    RVE41008.1    RSAL01000027    RVE51971.1    SOQ37441.1    CH477563    EAT38951.1    KQ459595    KPI95923.1    JXUM01021216    KQ560594    KXJ81736.1    PCG79570.1    KK852482    KDR22929.1    PCG79564.1    DS232756    EDS45428.1    PCG79571.1    AXCM01003135    KPI95914.1    ODYU01001220    SOQ37134.1    EDS45429.1    GAPW01001000    JAC12598.1    ATLV01015792    KE525036    KFB40769.1    KZ149964    PZC76264.1    BABH01041118    BABH01041119    GANO01001906    JAB57965.1    EDS45427.1    AXCN02001021    NEVH01001354    PNF42898.1    KQ460205    KPJ16878.1    PNF42894.1    AAAB01008986    EAA00192.3    GEZM01087818    JAV58458.1    KQ972004    EFA12973.2    PNF42889.1    SOQ37439.1    PNF42891.1    GECL01000840    JAP05284.1    OWR41479.1    RVE42200.1    APGK01035527    APGK01035528    BT127734    KB740927    KB631762    AEE62696.1    ENN78004.1    ERL85926.1    KQ460313    KPJ16069.1    BABH01039623    GEDC01016480    GEDC01008507    JAS20818.1    JAS28791.1    PZC76255.1    KQ459606    KPI91250.1    KK107403    EZA51300.1    QOIP01000011    RLU16525.1    APCN01003305    PCG79561.1    GANO01000632    JAB59239.1    KQ434870    KZC09576.1    ODYU01003788    SOQ42987.1    NWSH01002815    PCG67489.1    ATLV01022651    KE525335    KFB47856.1    GGFM01007521    MBW28272.1    KQ414585    KOC70516.1    PZC76259.1    BABH01041117    RVE42198.1    KOB66936.1   

Proteomes

UP000218220    UP000007151    UP000053268    UP000283053    UP000053240    UP000037510    + More
UP000005204    UP000008820    UP000069940    UP000249989    UP000075901    UP000027135    UP000002320    UP000075883    UP000076408    UP000030765    UP000069272    UP000075882    UP000075886    UP000235965    UP000007062    UP000007266    UP000075902    UP000019118    UP000030742    UP000053097    UP000279307    UP000075840    UP000076502    UP000075903    UP000075900    UP000075920    UP000076407    UP000053825   

PRIDE

H9IWG7    H9JI54    H9IVN2    H9JI53   

Pfam

PF00083   Sugar_tr        + More
PF07690   MFS_1
PF05978   UNC-93

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       
IPR011701   MFS       
IPR010291   Ion_channel_UNC-93       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

A0A2H1VFS1   A0A2A4JC88   A0A212F2Q3   A0A194QC91   A0A3S2L3J0   A0A194RIS2   + More
A0A2A4JBT3   A0A0L7LQ39   A0A0L7LKI8   A0A194QDP3   A0A212FPC5   A0A3S2NDN7   A0A2H1V1L3   A0A194REW9   A0A2A4J5Q3   A0A437B2S9   A0A0N1PI45   A0A194QI00   H9IWG7   A0A2A4J455   A0A212ERF4   A0A194QC06   A0A2H1V9B3   A0A2H1W2A4   A0A2H1VDM1   A0A2A4JU15   A0A3S2NA23   A0A212EJ20   A0A0L7KUG4   A0A2A4K5P1   A0A3S2NIQ2   A0A3S2M6B8   A0A2H1V9G0   Q16WK7   A0A194PSH8   A0A182GYP2   A0A182SYI8   A0A2A4K7E3   A0A067RSY2   A0A2A4K6M9   B0XDF0   A0A2A4K5R4   A0A182LZQ5   A0A194PT22   A0A2H1VA76   B0XDF1   A0A023ETG7   A0A182Y1J3   A0A084VS25   A0A182FXJ6   A0A2W1BRJ1   H9JI54   A0A182KSD5   U5EVF0   B0XDE9   A0A182QUL1   A0A2J7RPZ7   A0A194RGD2   A0A2J7RPY5   Q7Q0C3   A0A1Y1KD84   D2CG57   A0A2J7RPY7   A0A2H1V9D8   A0A2J7RPY0   A0A182Q0W8   A0A0V0GBF3   A0A212EJ24   A0A3S2TCP3   A0A182TM67   J3JWW6   A0A182Y1J2   A0A194RF43   H9IVN2   A0A1B6D578   A0A2W1BRL6   A0A194PJI6   A0A026W5E8   A0A3L8D7U5   A0A182KSC8   A0A2C9GR79   A0A2A4K5Q3   U5EWC3   A0A154PCE9   A0A182VDY0   A0A2H1VQB3   A0A182RFF8   A0A2A4J6J0   A0A182WEZ8   A0A084WCB2   A0A2M3ZIE3   A0A182WZR9   A0A0L7RIG1   A0A182M3B6   A0A2W1BMH3   A0A182FXJ5   H9JI53   A0A3S2NQS4   A0A0L7KV39  

PDB

4LDS     E-value=6.01895e-08,     Score=138

KEGG

101735429    no KO assigned | (RefSeq) organic cation transporter protein-like

GO

GO:0016021   GO:0022857   GO:0055085   GO:0005215   GO:0005634   GO:0008270   GO:0043565   GO:0003677   GO:0004879   GO:0003707   GO:0016286  

Length:

534

Number of predicted TMHs:

11

Exp number of AAs in TMHs:

231.00292

Exp number, first 60 AAs:

20.96708

Total prob of N-in:

0.13656

POSSIBLE N-term signal

sequence

outside

1  -  24

TMhelix

25  -  47

inside

48  -  160

TMhelix

161  -  180

outside

181  -  194

TMhelix

195  -  217

inside

218  -  221

TMhelix

222  -  244

outside

245  -  247

TMhelix

248  -  270

inside

271  -  335

TMhelix

336  -  358

outside

359  -  367

TMhelix

368  -  390

inside

391  -  398

TMhelix

399  -  416

outside

417  -  420

TMhelix

421  -  443

inside

444  -  455

TMhelix

456  -  478

outside

479  -  487

TMhelix

488  -  505

inside

506  -  534

 

 

Pi

3.496589

Theta

19.314283

Tajima's D

-1.432678

CLR

1.807464

CSRT

0.0690465476726164

Interpretation

Uncertain