Gene

KWMTBOMO12703

Pre Gene Modal

BGIBMGA001599

Annotation

PREDICTED:_organic_cation_transporter_protein-like_[Papilio_xuthus]

Location

Bomo_Chr21(+):12500693-12517975      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.882

CDS

ATGACGGACACTAACGCCGGCGGACTGGACACCGTTTTAAAGCAACTAGGTCCTTTTGGGAGATATAACGTTATCAATTACATGTTATTCTTATATCCCTGTTTTTTGGCCGGAATGTATGGATCGGTTTATGTATTCGAAGCTTCCGATATTAATTATAGATGCGAAATAAAAGAATGCGAAACATCTAACAACAGCGTTTGGATCGAATTCGGGATACCACAGGACAAAGGTAGTTTGTCTAAATGCGAAAGGTACTCGTTCAAAAATAGCACATTGAATAATGGAACTTGTACTCAAGATATGTTCGACAATCATCTAAGAGAAAAATGTGATACTTATGTGTACAGCGACGAAGATTCGGCAGTTAAAGATTTCAATCTGGGTTGCGAAAATTGGAAGAGGACACTGATCGGTACAATCCACAACTCTGGTCTATTTGTGTCTCTACCTCTCACCGGTATCATGTCTGATAGATTCGGTAGGAAAAAGGCTTTGGCTGTAGCTTCACTGATGAACTGCATTTTTGGAGTGATGAGATCGTTTTCAGTCAACTACCTTATGATGGTAGCTTGCGAGTTCTGCGAGGCGGCTTTTGGCGCTGGGGCATATTCGACAGCTTTTGTTTTAGCAATGGAACTCGTAGGACCCAAAGGCAGAGTATTCGGGAATACTTTGATAAATGTATTCTACGTTTGTGGCTTAATGACATTGGCTGGTTTATCATGGGCACTACAAGACTGGAGAACCTTACTGCGAGTCATATACTCGCCAGCATGCCTTGTCTTCTCCTACATTTGGATTCTAAACGAGAGCATAAGATGGTTGCTCAGTAAGGGAAAACACGAAAAGGCCGTCGAAATACTCAGAAAGGCGGCAAAAATGAATAAAGTGGAACTATCTGAGCAAGATCTAACGCCAATTTATGAACTAGATAAAGTCAAAGCGACAAAAGATAAAGATTATCTCGTTGTAAGTGCCGAAGGTCCATCTATCTTCCAGCAAGTGATCAGATCGAGTATAATCATCAAGAGATTATTAACGTGCTCCTATCTTTGGATTACTTGCACTTTCGTGTACTACGGATTGTCAATAAACTCTGTCTCGTTGGCTGGTAATAAATACGTAAATTTTATGCTGGTTGCCTTCGTGGAGATTCCAGCGAACTTTGCGTGTCTGGCCGTTTTGGATCGATTCGGAAGGAAGAGGGTTTTGATAACGATGTACATTTTAAGCGCGATTCTGTGCATTGGATTGGCTTTTATCCCTAAAGATAAAGCATGGTGGTCCTTGATCGTATATCTCTCTGGAAAGTTCTCGATAACGATCGCGTACAGTTCCGTCTACATCTACGTGTCAGAAGTCTTCCCTACGAATGTGAGGCAGTCACTTCTAGCCGTCTGCTCGTCTACTGGACGTATTGGGTCAACTTTGGCACCTTTAACACCTCTGCTCGCTCTATACTACGAGAAACTCCCGGTCATTTTCTTCGGTACTTTAGCAGTTTTGGCCGGCATGCTGGTCTTCACGCTGCCGGAAACTATAAACGTTCGGTTACCAGACACGATAGAGGAGGCCGAGAGATTGTCTAATCGTAAAAACGAAGAAAACCTTTCGTGA

Protein

MTDTNAGGLDTVLKQLGPFGRYNVINYMLFLYPCFLAGMYGSVYVFEASDINYRCEIKECETSNNSVWIEFGIPQDKGSLSKCERYSFKNSTLNNGTCTQDMFDNHLREKCDTYVYSDEDSAVKDFNLGCENWKRTLIGTIHNSGLFVSLPLTGIMSDRFGRKKALAVASLMNCIFGVMRSFSVNYLMMVACEFCEAAFGAGAYSTAFVLAMELVGPKGRVFGNTLINVFYVCGLMTLAGLSWALQDWRTLLRVIYSPACLVFSYIWILNESIRWLLSKGKHEKAVEILRKAAKMNKVELSEQDLTPIYELDKVKATKDKDYLVVSAEGPSIFQQVIRSSIIIKRLLTCSYLWITCTFVYYGLSINSVSLAGNKYVNFMLVAFVEIPANFACLAVLDRFGRKRVLITMYILSAILCIGLAFIPKDKAWWSLIVYLSGKFSITIAYSSVYIYVSEVFPTNVRQSLLAVCSSTGRIGSTLAPLTPLLALYYEKLPVIFFGTLAVLAGMLVFTLPETINVRLPDTIEEAERLSNRKNEENLS

Uniprot

H9IWG7   A0A0L7LKI8   A0A194QDP3   A0A194REW9   A0A212FPC5   A0A3S2NDN7   + More
A0A2A4J5Q3   A0A2H1V1L3   A0A2A4J455   A0A194QC06   A0A437B2S9   A0A0N1PI45   A0A3S2L3J0   A0A194QI00   A0A194QC91   A0A2A4JC88   A0A2H1VFS1   A0A194RIS2   A0A3S2NIQ2   A0A3S2M6B8   A0A212F2Q3   A0A212ERF4   A0A212EJ20   A0A1B6D578   A0A2H1V9B3   A0A067RSY2   A0A3S2NA23   A0A2J7RPY7   A0A2J7RPY0   A0A2W1BRJ1   A0A2A4K5R4   A0A2J7RPZ7   A0A2H1VA76   A0A194RF43   A0A2H1W2A4   A0A2H1VDM1   A0A2A4K7E3   A0A2A4JU15   A0A194PT22   A0A182GYP2   A0A0L7RIG1   A0A154PCE9   B0XDF1   Q16WK7   A0A088AAF9   V9ICM7   A0A195DF58   A0A2A3E3H4   A0A067RDE7   A0A2J7RPY5   A0A2A4K5Q2   A0A158NQD1   A0A1L8DEQ3   A0A195CVD4   A0A1L8DEI6   A0A0V0GBF3   D2CG57   A0A182LZQ5   A0A3L8D7U5   A0A194PSH8   U5EWC3   A0A3S2TCP3   A0A2J7RPY4   A0A2W1BMH3   B0XDE9   A0A194PR44   A0A151WZG1   A0A0L7KTQ3   A0A195E542   A0A182SYI8   U5EVF0   A0A182KSD5   A0A067RGL9   A0A026W5E8   A0A023ETG7   A0A212EJ24   A0A3S2L9U7   A0A151WY09   A0A437AVL7   B0XDF0   A0A1Y1KD84   A0A182Y1J3   H9IVN2   E2A7K4   A0A1I8MQZ5   A0A2H1V9D8   A0A084WCB2   Q7Q0C3   A0A212F848   A0A182QUL1   A0A195D353   A0A1B0DMI4   A0A2A4K5Q3   A0A182J645   A0A195ETW6   A0A2A4K6M9   Q2M044   A0A0A1WIH3   W8BAQ3   A0A2W1BRL6  

Pubmed

19121390    26227816    26354079    22118469    24845553    28756777    + More
26483478    17510324    21347285    18362917    19820115    30249741    20966253    24508170    24945155    28004739    25244985    20798317    25315136    24438588    12364791    14747013    17210077    15632085    17994087    25830018    24495485   

EMBL

BABH01006647    JTDY01000842    KOB75696.1    KQ459193    KPJ03085.1    KQ460325    + More
KPJ15840.1    AGBW02003000    OWR55596.1    RSAL01000186    RVE44804.1    NWSH01003151    PCG66854.1    ODYU01000079    SOQ34232.1    PCG66855.1    KPJ03083.1    RVE44801.1    KQ459762    KPJ20130.1    RVE44802.1    KPJ03081.1    KPJ03082.1    NWSH01002161    PCG69013.1    ODYU01002328    SOQ39679.1    KPJ15841.1    RSAL01000974    RVE41008.1    RSAL01000027    RVE51971.1    AGBW02010692    OWR48028.1    AGBW02013021    OWR44080.1    AGBW02014542    OWR41475.1    GEDC01016480    GEDC01008507    JAS20818.1    JAS28791.1    ODYU01001366    SOQ37440.1    KK852482    KDR22929.1    RSAL01000360    RVE42197.1    NEVH01001354    PNF42889.1    PNF42891.1    KZ149964    PZC76264.1    NWSH01000100    PCG79571.1    PNF42898.1    ODYU01001220    SOQ37134.1    KQ460313    KPJ16069.1    ODYU01005874    SOQ47209.1    ODYU01001802    SOQ38502.1    PCG79570.1    NWSH01000587    PCG75491.1    KQ459595    KPI95914.1    JXUM01021216    KQ560594    KXJ81736.1    KQ414585    KOC70516.1    KQ434870    KZC09576.1    DS232756    EDS45429.1    CH477563    EAT38951.1    JR038305    AEY58206.1    KQ980905    KYN11533.1    KZ288444    PBC25689.1    KK852530    KDR21906.1    PNF42894.1    PCG79557.1    ADTU01001734    GFDF01009227    JAV04857.1    KQ977259    KYN04595.1    GFDF01009228    JAV04856.1    GECL01000840    JAP05284.1    KQ972004    EFA12973.2    AXCM01003135    QOIP01000011    RLU16525.1    KPI95923.1    GANO01000632    JAB59239.1    RVE42200.1    PNF42897.1    PZC76259.1    EDS45427.1    KPI95921.1    KQ982639    KYQ53259.1    JTDY01005909    KOB66490.1    KQ979657    KYN19974.1    GANO01001906    JAB57965.1    KDR22927.1    KK107403    EZA51300.1    GAPW01001000    JAC12598.1    OWR41479.1    RVE42203.1    KQ982662    KYQ52637.1    RVE42199.1    EDS45428.1    GEZM01087818    JAV58458.1    BABH01039623    GL437348    EFN70576.1    SOQ37439.1    ATLV01022651    KE525335    KFB47856.1    AAAB01008986    EAA00192.3    AGBW02009797    OWR49901.1    AXCN02001021    KQ976885    KYN07327.1    AJVK01006968    PCG79561.1    KQ981979    KYN31324.1    PCG79564.1    CH379069    EAL31092.3    GBXI01016094    JAC98197.1    GAMC01016374    JAB90181.1    PZC76255.1   

Proteomes

UP000005204    UP000037510    UP000053268    UP000053240    UP000007151    UP000283053    + More
UP000218220    UP000027135    UP000235965    UP000069940    UP000249989    UP000053825    UP000076502    UP000002320    UP000008820    UP000005203    UP000078492    UP000242457    UP000005205    UP000078542    UP000007266    UP000075883    UP000279307    UP000075809    UP000075901    UP000075882    UP000053097    UP000076408    UP000000311    UP000095301    UP000030765    UP000007062    UP000075886    UP000092462    UP000075880    UP000078541    UP000001819   

PRIDE

H9IWG7    H9IVN2   

Pfam

PF00083   Sugar_tr        + More
PF07690   MFS_1
PF05978   UNC-93

Interpro

IPR020846   MFS_dom        + More
IPR005829   Sugar_transporter_CS       
IPR036259   MFS_trans_sf       
IPR005828   MFS_sugar_transport-like       
IPR011701   MFS       
IPR010291   Ion_channel_UNC-93       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9IWG7   A0A0L7LKI8   A0A194QDP3   A0A194REW9   A0A212FPC5   A0A3S2NDN7   + More
A0A2A4J5Q3   A0A2H1V1L3   A0A2A4J455   A0A194QC06   A0A437B2S9   A0A0N1PI45   A0A3S2L3J0   A0A194QI00   A0A194QC91   A0A2A4JC88   A0A2H1VFS1   A0A194RIS2   A0A3S2NIQ2   A0A3S2M6B8   A0A212F2Q3   A0A212ERF4   A0A212EJ20   A0A1B6D578   A0A2H1V9B3   A0A067RSY2   A0A3S2NA23   A0A2J7RPY7   A0A2J7RPY0   A0A2W1BRJ1   A0A2A4K5R4   A0A2J7RPZ7   A0A2H1VA76   A0A194RF43   A0A2H1W2A4   A0A2H1VDM1   A0A2A4K7E3   A0A2A4JU15   A0A194PT22   A0A182GYP2   A0A0L7RIG1   A0A154PCE9   B0XDF1   Q16WK7   A0A088AAF9   V9ICM7   A0A195DF58   A0A2A3E3H4   A0A067RDE7   A0A2J7RPY5   A0A2A4K5Q2   A0A158NQD1   A0A1L8DEQ3   A0A195CVD4   A0A1L8DEI6   A0A0V0GBF3   D2CG57   A0A182LZQ5   A0A3L8D7U5   A0A194PSH8   U5EWC3   A0A3S2TCP3   A0A2J7RPY4   A0A2W1BMH3   B0XDE9   A0A194PR44   A0A151WZG1   A0A0L7KTQ3   A0A195E542   A0A182SYI8   U5EVF0   A0A182KSD5   A0A067RGL9   A0A026W5E8   A0A023ETG7   A0A212EJ24   A0A3S2L9U7   A0A151WY09   A0A437AVL7   B0XDF0   A0A1Y1KD84   A0A182Y1J3   H9IVN2   E2A7K4   A0A1I8MQZ5   A0A2H1V9D8   A0A084WCB2   Q7Q0C3   A0A212F848   A0A182QUL1   A0A195D353   A0A1B0DMI4   A0A2A4K5Q3   A0A182J645   A0A195ETW6   A0A2A4K6M9   Q2M044   A0A0A1WIH3   W8BAQ3   A0A2W1BRL6  

PDB

6N3I     E-value=1.14761e-09,     Score=153

KEGG

101747218    no KO assigned | (RefSeq) organic cation transporter protein-like

GO

GO:0022857   GO:0016021   GO:0005215   GO:0055085   GO:0007613   GO:0015870   GO:0032223   GO:0090328   GO:0015220   GO:0005634   GO:0008270   GO:0043565   GO:0003677   GO:0004879   GO:0003707   GO:0016286  

Length:

539

Number of predicted TMHs:

11

Exp number of AAs in TMHs:

216.86126

Exp number, first 60 AAs:

22.54155

Total prob of N-in:

0.00694

POSSIBLE N-term signal

sequence

outside

1  -  23

TMhelix

24  -  46

inside

47  -  164

TMhelix

165  -  184

outside

185  -  193

TMhelix

194  -  216

inside

217  -  222

TMhelix

223  -  245

outside

246  -  249

TMhelix

250  -  269

inside

270  -  345

TMhelix

346  -  365

outside

366  -  374

TMhelix

375  -  397

inside

398  -  403

TMhelix

404  -  421

outside

422  -  430

TMhelix

431  -  453

inside

454  -  464

TMhelix

465  -  487

outside

488  -  491

TMhelix

492  -  511

inside

512  -  539

 

 

Pi

21.148654

Theta

19.733663

Tajima's D

0.191165

CLR

1.954267

CSRT

0.427378631068447

Interpretation

Uncertain