SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12698
Annotation
Uncharacterized_protein_OBRU01_07177_[Operophtera_brumata]
Location in the cell
Extracellular   Reliability : 2.109
 

Sequence

CDS
ATGAATTCAACCGCGTGCAAGTATTACACGGAAAGAACTCTGGGTTGGATGTTGAACAACAAAACGATAGTGTTTCTTTCATTACTGTCATTCTGTTTGTTTGTTTCGACGTTAGCGTTGGCCGGGCAGAGGAATCGGCTCACGGCCGAGGTGGACGATCTCAGGCACCGTTTGACCACGTCTTCTGTTCTGGAAACTACAACACCAATCAACGTAGACACAACAACTACTACAGAAGATTCAACTACAGTCAAGACTGAGCCTCCCGTCTCAGAGGGCAACAACCCAGTGGAAGAGAACAAGGAAAACGGAGTAGGGAAAGACGATGAAAATCTTTTTCCTCTCGTTGTCAAGGATAAGTCACTGCTCCAGTTAATGGGCTATGCAGCTTAG
Protein
MNSTACKYYTERTLGWMLNNKTIVFLSLLSFCLFVSTLALAGQRNRLTAEVDDLRHRLTTSSVLETTTPINVDTTTTTEDSTTVKTEPPVSEGNNPVEENKENGVGKDDENLFPLVVKDKSLLQLMGYAA

Summary

Ontologies

Topology

Length:
130
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
20.47458
Exp number, first 60 AAs:
20.47426
Total prob of N-in:
0.67511
POSSIBLE N-term signal
sequence
outside
1  -  22
TMhelix
23  -  42
inside
43  -  130
 
 

Population Genetic Test Statistics

Pi
15.990478
Theta
14.075951
Tajima's D
0.332707
CLR
0.205886
CSRT
0.47827608619569
Interpretation
Uncertain
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