SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12695
Pre Gene Modal
BGIBMGA001388
Annotation
MBF2_[Samia_cynthia]
Location in the cell
Extracellular   Reliability : 1.672 PlasmaMembrane   Reliability : 1.685
 

Sequence

CDS
ATGAAACTGCAAATCATTATATTAGTCCTCGCCGCTGTGGTGATCGTAGAATGCGGTCACCTATTCGTCGGTACCAATATCAATAGACCTATGGTCTACCATCACAACGCTAAGTACGACGCCAAATTATTCCGCAAAAGGGTTGAGAACCTTCATTACGTTCTACCCCAGGTGCCATCCACCATTGGCAAGTCCATTCAGGGCATTCTGGCCTATGATAAGACTCACAGCACCGCTTCCGCTAACATCACTCAAGGTGGAATCTGGTTCACTTTCGTCAATCTCCGTATGAAGAGCGAACGCGTAAACAAGCTTAATTACGATGTCTACATCTACGTTTAA
Protein
MKLQIIILVLAAVVIVECGHLFVGTNINRPMVYHHNAKYDAKLFRKRVENLHYVLPQVPSTIGKSIQGILAYDKTHSTASANITQGGIWFTFVNLRMKSERVNKLNYDVYIYV

Summary

EMBL
BABH01006586    BABH01006584    BABH01044987    NWSH01001065    PCG72834.1    GBRD01011274    + More
JAG54550.1    ODYU01008370    SOQ51899.1    ODYU01006834    SOQ49044.1    AB012298    BAA34219.1    RSAL01000006    RVE54240.1    SOQ51898.1    AGBW02012353    OWR45174.1    GDQN01001318    JAT89736.1    PCG72835.1    D70818    BAA20370.1    AB012297    BAA34401.1    GAIX01002781    JAA89779.1    JTDY01003071    KOB70201.1    ODYU01008860    SOQ52824.1    KZ149899    PZC78605.1    NWSH01004350    PCG65192.1    NWSH01000473    PCG76158.1    NWSH01001063    PCG72838.1    BABH01009446    BABH01009447    BABH01009448    KQ460845    KPJ12004.1    PZC78604.1    KQ460940    KPJ10619.1    KQ459593    KPI96711.1    JQ619213    AFH57151.1    KQ459896    KPJ19461.1    KQ459583    KPI98676.1    ODYU01010243    SOQ55221.1    KPI98677.1    AGBW02014560    OWR41426.1    GDQN01007818    GDQN01000344    JAT83236.1    JAT90710.1    AK401546    KQ459592    BAM18168.1    KPI96788.1    AB499730    BAH57948.1    KPJ19462.1    RSAL01000239    RVE43687.1    ODYU01007904    SOQ51090.1    RSAL01000011    RVE53567.1    GAIX01009070    JAA83490.1    AGBW02014390    OWR41766.1    GAIX01000356    JAA92204.1    KQ460416    KPJ14935.1    JTDY01006411    KOB66034.1    BABH01031461    BABH01031462    ODYU01004645    SOQ44744.1    KZ149912    PZC78068.1    JQ660354    AFH57171.1    KQ459324    KPJ01662.1    ODYU01004898    SOQ45248.1    RSAL01000010    RVE53781.1    JTDY01000603    KOB76496.1    GAIX01006931    JAA85629.1    JQ619214    AFH57152.1    GDQN01003582    JAT87472.1    AK401495    KQ459603    BAM18117.1    KPI92700.1    AK401791    BAM18413.1    KPJ12085.1    JTDY01002960    KOB70409.1    RSAL01000019    RVE52692.1    GAIX01007178    JAA85382.1    RSAL01000334    RVE42473.1    ODYU01003537    SOQ42442.1    ODYU01000023    SOQ34093.1    JQ619216    AFH57154.1    KQ459992    KPJ18592.1    KPJ19465.1    KQ459166    KPJ03563.1    GDQN01009453    GDQN01007785    GDQN01000213    JAT81601.1    JAT83269.1    JAT90841.1    JQ619215    AFH57153.1    KQ459249    KPJ02447.1    NWSH01005557    PCG64129.1    KZ149959    PZC76392.1    NWSH01000767    PCG74318.1    KZ150342    PZC71302.1    JTDY01002436    KOB71425.1    ODYU01003892    SOQ43216.1    RSAL01000385    RVE42034.1    KZ149953    PZC76563.1    JTDY01008778    KOB64403.1    OWR41429.1    BABH01025361    NWSH01000152    PCG78998.1    PZC78609.1    AGBW02010320    OWR48732.1    NWSH01002920    PCG67302.1    GDQN01002024    JAT89030.1    AGBW02012289    OWR45279.1   
Pfam
PF15868   MBF2
Interpro
IPR031734   MBF2       

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.983208
 
 
Length:
113
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
23.21804
Exp number, first 60 AAs:
21.19346
Total prob of N-in:
0.37320
POSSIBLE N-term signal
sequence
outside
1  -  4
TMhelix
5  -  27
inside
28  -  113
 
 

Population Genetic Test Statistics

Pi
17.025468
Theta
13.960538
Tajima's D
1.162945
CLR
4.017001
CSRT
0.71726413679316
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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