SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12694
Pre Gene Modal
BGIBMGA014311
Annotation
MBF2_[Samia_cynthia]
Location in the cell
Extracellular   Reliability : 2.48
 

Sequence

CDS
ATGATGAAGTTGCAAATCGTTGTGTTGCTACTCGCCGCTGCGGTGATCGTGGAATGCGGTCACACTTTCGTCGGCACCAGCGTCAATAGGCCCTTGGTCTACCACCATGACGTGCAGTACAGCTCGAAAATGTTCCGTAAGAGAGTTGAAAACCTCCATTTCAGCTTGCCTCATGTACCTTCCATATTCGGGAGGTCCATTCAGGGCATTCTGGCCTTCGACAAGACCTATAGCACCGCTTCTGCGAACATCACCCAAGGCGGAATCGGCTATAACTTCGTCAATCTCCGCATGAAGAGCGAGCGCGGATCAAAAATTCATTACGATGTATACATTTTTGCTTAA
Protein
MMKLQIVVLLLAAAVIVECGHTFVGTSVNRPLVYHHDVQYSSKMFRKRVENLHFSLPHVPSIFGRSIQGILAFDKTYSTASANITQGGIGYNFVNLRMKSERGSKIHYDVYIFA

Summary

EMBL
BABH01006584    BABH01044987    AB012298    BAA34219.1    BABH01006586    GBRD01011274    + More
JAG54550.1    NWSH01001065    PCG72834.1    ODYU01008370    SOQ51899.1    ODYU01006834    SOQ49044.1    RSAL01000006    RVE54240.1    SOQ51898.1    AGBW02012353    OWR45174.1    PCG72835.1    GDQN01001318    JAT89736.1    D70818    BAA20370.1    GAIX01002781    JAA89779.1    AB012297    BAA34401.1    JTDY01003071    KOB70201.1    ODYU01008860    SOQ52824.1    NWSH01004350    PCG65192.1    KZ149899    PZC78605.1    ODYU01010243    SOQ55221.1    NWSH01000473    PCG76158.1    RSAL01000239    RVE43687.1    KQ459593    KPI96711.1    KQ460940    KPJ10619.1    ODYU01004645    SOQ44744.1    AB499730    BAH57948.1    GAIX01009070    JAA83490.1    BABH01009446    BABH01009447    BABH01009448    NWSH01001063    PCG72838.1    KQ459896    KPJ19461.1    KQ459583    KPI98676.1    KPJ19462.1    KQ460416    KPJ14935.1    PZC78604.1    BABH01031461    BABH01031462    GDQN01007818    GDQN01000344    JAT83236.1    JAT90710.1    KQ460845    KPJ12004.1    JQ619213    AFH57151.1    KQ459324    KPJ01662.1    KPI98677.1    AGBW02014390    OWR41766.1    KZ149912    PZC78068.1    AK401546    KQ459592    BAM18168.1    KPI96788.1    GDQN01003582    JAT87472.1    JTDY01000603    KOB76496.1    JTDY01002960    KOB70409.1    JQ660354    AFH57171.1    RSAL01000011    RVE53567.1    AGBW02014560    OWR41426.1    AK401791    BAM18413.1    AK401495    KQ459603    BAM18117.1    KPI92700.1    KPJ12085.1    ODYU01007904    SOQ51090.1    ODYU01004898    SOQ45248.1    GAIX01000356    JAA92204.1    JTDY01006411    KOB66034.1    GAIX01007178    JAA85382.1    RSAL01000010    RVE53781.1    RSAL01000334    RVE42473.1    JQ619214    AFH57152.1    GAIX01006931    JAA85629.1    RSAL01000019    RVE52692.1    NWSH01000767    PCG74318.1    KZ150342    PZC71302.1    ODYU01003892    SOQ43216.1    KQ459992    KPJ18592.1    JQ619216    AFH57154.1    ODYU01000023    SOQ34093.1    KQ459249    KPJ02447.1    ODYU01003537    SOQ42442.1    KPJ19465.1    BABH01025361    JQ619215    AFH57153.1    NWSH01005557    PCG64129.1    OWR41429.1    GDQN01002024    JAT89030.1    KQ459166    KPJ03563.1    KZ149959    PZC76392.1    KZ149953    PZC76563.1    GDQN01009453    GDQN01007785    GDQN01000213    JAT81601.1    JAT83269.1    JAT90841.1    KPJ03562.1    KPJ18593.1    JTDY01008778    KOB64403.1    JTDY01002436    KOB71425.1    AGBW02012289    OWR45279.1    NWSH01002920    PCG67302.1    NWSH01000152    PCG78998.1    PZC78609.1    JTDY01000808    KOB75797.1    AGBW02010320    OWR48732.1    RSAL01000385    RVE42034.1    KY031307    ATU83058.1    CVRI01000063    CRL04874.1    KPJ18591.1   
Pfam
PF15868   MBF2
Interpro
IPR031734   MBF2       

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.991391
 
 
Length:
114
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
19.9113
Exp number, first 60 AAs:
17.24103
Total prob of N-in:
0.72649
POSSIBLE N-term signal
sequence
outside
1  -  114
 
 

Population Genetic Test Statistics

Pi
22.736177
Theta
19.536519
Tajima's D
0.513284
CLR
0.32759
CSRT
0.522573871306435
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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