SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12687
Pre Gene Modal
BGIBMGA001393
Annotation
PREDICTED:_uncharacterized_protein_LOC106119297_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 2.445
 

Sequence

CDS
ATGTGCACGATTACCGTGATAGTAATTTTGTTCGTATGCCATCAATCAGACGGTACATTCGAATCAAGAGAGTCATTGAATGTTGGAACAGTGTTGTTTCTAAATTCAGACATCAGAAATAAGAAATGGACCACAAACGAAATTGGATTACTAAGAGCACGTGAATACTTTCAACATGCGATTCCACCTCAGAGGATCTTGTACAGGGTAGACGAACATTTTGTTGATAATTTACTAGATTATTTTAAAACTGGCTACTCAGCCATTAAGAGGGAAGCAGGAGATCCAGTGACAGACAAAACAATGACTGTAGCCCTTTCAGATGTTATAGGTGGTTACTTAAAATCTTGGGTACTACCAGTAACAAAATTCGCTTATTATGGGGGTTCAATATCCCAAGAGAATGCGCTAAATATATTCAACTTTTACAAAGAAGTTAAACGGTATTTAGGCACAGACGGAAAGTCTTGGAGCGATCCCGATCCGCAACTACTAAATTCAATCGAAGTCAATATAGAATCGCCAAAGCATGTCTTCAAAACGAGAAGTCTGGATAACCCTTGCGAATCTTTAGCTTACTTCATTAAAACACCTGTTGGTTTCGTAGTACCAACGCCGTATGTGAAATGGAATGATCAAGGTAGTACAATGTTTTTGCCGCTCAAGAACGACTCGCTAGTTGCTCTGGAATCCGAATCGGCATCGAGCGCGCTGTTCAAATATTACGATGTGGCCAAAAACTGTATAGAAACGTCCGGTCAGGGCGATCAAGATAATTTCGATGAGAGATTCCAAACATGGCTATCAGATGACATCGTGCCCCATCTAAACGATGATAAACTTTACACTGCTCTAGGAAGTGTTTTGACACTGCTCAACACTTCAAATAACGATGATGGCTACGAAGAAACTTTCAAGGACTATTTCAAAATCAATACCTGCGCGTATTTTCATAACCTTTGCAACATAGATTTTTCGTCAAAGAAAACTATTGTCATATGTCTGATAATATTTTTAGAGATAGTTTGGTGTATACCAACATTGATTTTATTGCTATGCAAGAAAAGTAAAAATGATGACACTTGCGTCGATTCATCAGATAGTAGTAAAAGAAGACGTTACATAGATGGTTTCAAAGTTCAGAAGTATGGTAAAAAAGGTAAATATGGAAGAAGTGGGAAAACTCAGACAGCTTCCAGAGTACAAATTAATACTAGCGATTATGAAGGTTTATTTATAGCTGAAGACGTTCACAACGTTGGAACCATGTGTTCATCAGTTTCGAGAAACTCAGTAGGAACATGTACGCAGTCGTTTTTTAGCTCGAAGTTTTGTTCGGCCGATCTTGCCAAAATCATATACGAAGGTCCGAGCGTGACAAATAAACGACCATTAAAACAAATTATAACACAGAAAAGCGACGCTAACGTTTTGGATGCCCGAGACATCATACTCCCCGAGATTTATCGAAAATTTTACTCAAAATCAACCCCGTTCGAAGTTGAGCAAAGCTACAGCACGAATCAGGGTTTAGAACCATCTAAGACGGTGACCCTACTCAATGGGGGCACCGTACCTGGCGTTGAGTATGACACCAAGCACAAAGCTTGTTGCTGCTCTGAACAAGTAAGCTCTATAGACACGCTGAAGAATAACAATGTAGGTGAGTGCACGTGTCAACCTTGTTTTGACAGCTCATCCAAAACTCCTATTGATTGCAGCAACAATAAAGTATCACAATCTGATGTTAATACAAACATATGTTCAACTATTGAATCGAAAAATAGGACTTCAAAATCGACAAGATTCCGAATACAAAAAGAGAAAAAACAAAACAAAATCAAAGGTATAAAATTAAGCAATACAAAGCCCTACGTTGAGATAACAATTGAGAGACCTCAAAACGAAATATCAGTAGGCATCAGTACTGTGACTAGAAATCAAGGACCAAACAGTCATAGACCAAGTAAAATACCAAAAAGATCTGTGACAGCCGCTGGTGAAGCCAAATTAACTTGTAAACCCCCTGCTTCTCCTGAAGATAGATTCCAAAGAAAGAGCTTTATACCACAGCCAAAGAAACAGGCCCTGGTAGTTGCTGATGATATCGTACTTAAAAATAGAGGTACGTCTATGAAAGAAAAAAAACTAAATGTAACTTTATAG
Protein
MCTITVIVILFVCHQSDGTFESRESLNVGTVLFLNSDIRNKKWTTNEIGLLRAREYFQHAIPPQRILYRVDEHFVDNLLDYFKTGYSAIKREAGDPVTDKTMTVALSDVIGGYLKSWVLPVTKFAYYGGSISQENALNIFNFYKEVKRYLGTDGKSWSDPDPQLLNSIEVNIESPKHVFKTRSLDNPCESLAYFIKTPVGFVVPTPYVKWNDQGSTMFLPLKNDSLVALESESASSALFKYYDVAKNCIETSGQGDQDNFDERFQTWLSDDIVPHLNDDKLYTALGSVLTLLNTSNNDDGYEETFKDYFKINTCAYFHNLCNIDFSSKKTIVICLIIFLEIVWCIPTLILLLCKKSKNDDTCVDSSDSSKRRRYIDGFKVQKYGKKGKYGRSGKTQTASRVQINTSDYEGLFIAEDVHNVGTMCSSVSRNSVGTCTQSFFSSKFCSADLAKIIYEGPSVTNKRPLKQIITQKSDANVLDARDIILPEIYRKFYSKSTPFEVEQSYSTNQGLEPSKTVTLLNGGTVPGVEYDTKHKACCCSEQVSSIDTLKNNNVGECTCQPCFDSSSKTPIDCSNNKVSQSDVNTNICSTIESKNRTSKSTRFRIQKEKKQNKIKGIKLSNTKPYVEITIERPQNEISVGISTVTRNQGPNSHRPSKIPKRSVTAAGEAKLTCKPPASPEDRFQRKSFIPQPKKQALVVADDIVLKNRGTSMKEKKLNVTL

Summary

Uniprot
ProteinModelPortal

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.892037
 
 
Length:
721
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
17.79319
Exp number, first 60 AAs:
0.0021
Total prob of N-in:
0.30091
outside
1  -  329
TMhelix
330  -  352
inside
353  -  721
 
 

Population Genetic Test Statistics

Pi
26.50109
Theta
22.42558
Tajima's D
0.532875
CLR
1.177651
CSRT
0.529923503824809
Interpretation
Uncertain
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