SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12686  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001595
Annotation
aliphatic_nitrilase_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 2.742
 

Sequence

CDS
ATGGAGAATGAAACTCACAGCCTTGAATCTATAATAAACAACAACTTGACCGGGCGCGACTTGGAAGAGTTCAACAGAATTCATTTTGGGCGGCGGAATAACCTTGAAATCAAACTGAAAGAATCCTCGATCGCTGCAGCTAAGGAGGCTGACTTCGACGTCGCCGCATACGCTTTCCCGGCCAAGGACGAGCAGACCCGACCCCCGAGAATTGTGAAGGTAGGAATAGTTCAGCATTCCATCGCGGTGCCCACCGATCGTCCAGTCAACGAGCAAAAGAAAGCAATTTTCAATAAAGTCAAGAAAATCATCGATGTTGCCGGCCAAGAGGGTGTTAACATCATCTGTTTCCAAGAGTTGTGGAACATGCCCTTCGCGTTCTGCACAAGGGAGAAGCAGCCGTGGTGCGAGTTTGCCGAATCAGCTGAAGACGGGCCGACCACGACCTTCCTTCGGGAACTCGCCATCAAGTACGCAATGGTGATCGTGTCCTCGATATTAGAAAGGGACGAGAAGCATTCGGACATACTTTGGAACACTGCGGTTGTAATTAGTGACACCGGAAACGTGATCGGGAAACATCGCAAGAACCACATTCCGAGAGTCGGCGATTTTAACGAATCCAACTACTACATGGAAGGTAACACCGGCCATCCTGTATTTGCGACCAGATACGGCAAGATCGCGGTGAACATCTGCTTCGGACGGCACCACGTCTTGAACTGGATGATGTTCGGACAGAACGGAGCGGAGATCGTCTTCAATCCGTCAGCGACGATCGCCGGAGAAGGCGGCAGCGAGTACATGTGGAACGTTGAAGCTAGGAACGCAGCTATCACGAACTGCTACTTCACAGCGGCCATCAACCGAGTCGGCTACGAGGAGTTCCCGAACGAGTTCACTTCGGCTGACGGGAAACCGGCACACAAAGACTTGGGCCTGTTCTACGGATCGAGCTACTTCTGCGGCCCTGACGGCGTTAGGTGCCCCGGTCTGTCCCGCACCAGAGACGGCTTGTTGATCGCGGCCGTAGACTTGAACCTGAACAGACAGATCAAAGACAGACGCTGTTATTACATGACCCAACGCCTGGACATGTACGTGAACAGTCTCAGCAAAGTACTCGAGCTGGATTACAAGCCGCAGGTCGTACACGAAAATGAAAAGCAATTTTAA
Protein
MENETHSLESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIAAAKEADFDVAAYAFPAKDEQTRPPRIVKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGHPVFATRYGKIAVNICFGRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIKDRRCYYMTQRLDMYVNSLSKVLELDYKPQVVHENEKQF

Summary

EMBL
BABH01006545    GU354318    ADB27116.1    ODYU01004363    SOQ44163.1    NWSH01006150    + More
PCG63633.1    AK401302    KQ459193    BAM17924.1    KPJ03095.1    MG846908    AXY94760.1    KQ460325    KPJ15829.1    JTDY01001176    KOB74647.1    AGBW02011420    OWR46693.1    KPJ03097.1    KPJ15827.1    JTDY01009614    KOB63217.1    ODYU01003259    SOQ41779.1    NWSH01000211    PCG78364.1    KQ459896    KPJ19394.1    KQ459585    KPI98426.1    AK401518    BAM18140.1    GAIX01004921    JAA87639.1    BABH01006272    KK853042    KDR12152.1    CVRI01000037    CRK93358.1    NEVH01019430    PNF22360.1    KB199650    ESP05094.1    GL732580    EFX74852.1    GDIP01181938    JAJ41464.1    GDIP01181937    JAJ41465.1    GDIP01020116    JAM83599.1    GFDL01006163    JAV28882.1    DS231866    EDS40510.1    DS235158    EEB12699.1    CH477653    EAT37751.1    UFQT01001408    SSX30420.1    GDIQ01001384    JAN93353.1    UFQS01000034    UFQT01000034    SSW97906.1    SSX18292.1    QCYY01003537    ROT62833.1    GDIP01162694    JAJ60708.1    AAAB01008980    EAA13946.2    APCN01005251    GFDF01001176    JAV12908.1    GFDF01001177    JAV12907.1    AXCN02001862    KA646257    AFP60886.1    CH916367    EDW02365.1    CH940667    EDW57165.2    IAAA01027348    LAA06508.1    GDRN01077926    GDRN01077925    GDRN01077923    JAI62667.1    GANO01001845    JAB58026.1    JRES01001669    KNC21021.1    GG666599    EEN50819.1    GAMC01003399    JAC03157.1    CH933808    EDW08295.2    CP012524    ALC41465.1    GDHF01009329    JAI42985.1    KE346371    KJE96277.1    GBHO01004492    GDHC01020776    JAG39112.1    JAP97852.1    CVRI01000070    CRL07088.1    GBRD01004313    JAG61508.1    CH480821    EDW55255.1    PYGN01000078    PSN55002.1    AXCM01000430    CM000364    EDX12010.1    CH954181    EDV48168.1    CH902617    EDV41855.1    CH964239    EDW82829.1    GBHO01004491    GBHO01004490    GDHC01017394    JAG39113.1    JAG39114.1    JAQ01235.1    AE014297    AF333187    AAF54141.2    AAK60520.1    HAAD01000553    CDG66785.1    RQTK01000246    RUS83360.1    JXJN01000364    CM000160    EDW96348.1    KB320991    ELW49652.1    AMGL01040103    AMGL01040104    AMGL01040105    AMGL01040106    AMGL01040107    AMGL01040108    BT011121    AAR82788.1    DS985246    EDV23746.1    AL953914    CR848681    BC053204    BC164705    AAH53204.1    AAI64705.1    AAEX03014828    AAEX03014829    AAEX03014830    CH892044    EDX00135.1    LSMT01000146    PFX25616.1    DF237025    GAQ81301.1   
Pfam
PF00795   CN_hydrolase        + More
PF13873   Myb_DNA-bind_5
Interpro
IPR003010   C-N_Hydrolase        + More
IPR036526   C-N_Hydrolase_sf       
IPR028002   Myb_DNA-bind_5       
SUPFAM
SSF56317   SSF56317       
Gene 3D
PDB
2VHI     E-value=1.43203e-129,     Score=1185

Ontologies

Topology

Length:
391
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00524999999999997
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00644
outside
1  -  391
 
 

Population Genetic Test Statistics

Pi
14.715189
Theta
13.096738
Tajima's D
0.286641
CLR
0.44773
CSRT
0.462576871156442
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
26822097 MENETHSIESIINNNITGR 100.00 2e-10
26280517 VEPEVGEVINKK 100.00 2e-10
25044914 VGDEFMR 100.00 2e-10
28467696 VGDAVNDQIGK 100.00 2e-10
26280517 EIVEPEGAVVFTK 95.45 2e-10
25044914 EKPPINVVGDVGGR 95.45 2e-10
28467696 EKQPTTPPPETSPSSPTASKK 95.45 2e-10
26280517 DEIYNSIIVADYDSAVER 95.83 2e-10
26280517 TYAYITPDIWR 100.00 2e-08
28467696 VGIVQHSIAVPTDRPVNEQK 100.00 2e-08
26280517 AAAVDVEPYWPGIFAK 95.24 2e-08
25044914 HSAPTSVK 95.24 2e-08
26280517 VAFTGSTEVGK 100.00 5e-08
25044914 VGYEEFPNEFTSADGK 100.00 5e-08
28467696 VGWIFTDIVPIDVSK 100.00 5e-08
26822097 EADFDVAAYAFPAK 100.00 9e-08
26280517 VFAPEEISAMVITK 100.00 9e-08
25044914 VGIVQHSIAVPTDR 100.00 9e-08
28467696 VGITNYAAAYSTGIIIAR 100.00 9e-08
26280517 VGTNIIVNIR 100.00 8e-05
25044914 VGWSDPIK 100.00 8e-05
26280517 MGADGDPTSVVDTK 100.00 4e-04
25044914 NAAITAIDYVQR 100.00 4e-04
28467696 NAAIANSYYTCAINR 100.00 4e-04
25044914 VGIVIASTK 100.00 0.001
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