SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12681
Pre Gene Modal
BGIBMGA001397
Annotation
Uncharacterized_protein_OBRU01_02162_[Operophtera_brumata]
Location in the cell
Cytoplasmic   Reliability : 1.943 Nuclear   Reliability : 2.388
 

Sequence

CDS
ATGGAGGCTGCTACGCATGAAAGTGTTCAAGCCGATTTACCTGAACCAGAAAATGAAGATAGTGAACCTCGAATCAGACCATTGGAAAGGATTAAGCTCCACCCTAAATATCCCATAGAGCCATCTGCTTATGGAAAGGGAAAGAACTTCAGTCGACCCTGGATATTACAAGATGGACGAACAGTTCCGGGAATTGGCAGCGAAATGCGGGAAAATTATCAAATACCAAAAAGACCTCCCCATACAGAAGGTATACGTAAGCGTATGCTCACGGACTTCTTTTGGGAACAAATGCTAGATGAAGTCATCGAAGAGTTGGCTACTTCACAACCCGTTTCTGAATATTGCACGGAATACGATGCCAATTACATCAAAGATGAGTTCGAGCCTCGAAATTTGGAAGTGGCTGCAGATAAGAATATGCACTTGAAATATCCACTTTACGGTACGGGCTCTAGCGCAATTACTTTCTATAGTGAAACTGCCAAGAAGACTGGCCCGGGTGAAATCTTAGAAAAGTTCCGAAGATGTCAGTATTTCACTAAACCAATGGAAGAAAGACTCGACAATGGTTGGGTTTTGTAA
Protein
MEAATHESVQADLPEPENEDSEPRIRPLERIKLHPKYPIEPSAYGKGKNFSRPWILQDGRTVPGIGSEMRENYQIPKRPPHTEGIRKRMLTDFFWEQMLDEVIEELATSQPVSEYCTEYDANYIKDEFEPRNLEVAADKNMHLKYPLYGTGSSAITFYSETAKKTGPGEILEKFRRCQYFTKPMEERLDNGWVL

Summary

Ontologies

GO

Topology

Length:
194
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00619
Exp number, first 60 AAs:
0
Total prob of N-in:
0.12989
outside
1  -  194
 
 

Population Genetic Test Statistics

Pi
18.179069
Theta
18.133201
Tajima's D
-0.466222
CLR
0.523836
CSRT
0.248987550622469
Interpretation
Uncertain
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