Gene
KWMTBOMO12675 Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001587
Annotation
PREDICTED:_synaptotagmin-4_[Papilio_xuthus]
Location in the cell
Nuclear Reliability : 2.481
Sequence
CDS
ATGGACGCGATCAAGAAGAAGATGCAGGCGATGAAGCTGGAGAAGGACAATGCCATGGACAAGGCCGACACCTGCGAACAGCAGGCTAGAGACGCCAACCTCCGTGCTGAGAAGGTAAACGAGGAAGTCCGCGAACTCCAGAAGAAGCTCGCCCAGGTGGAGGAAGACCTGATCCTGAACAAGAACAAACTGGAGCAGGCCAACAAGGACCTTGAAGAGAAGGAGAAGCAGCTGACCGCCACCGAAGCCGAGGTCGCTGCCCTCAACAGGAAAGTGCAGCAGATTGAGGAAGACCTCGAGAAATCTGAGGAGAGGTCCGGCACCGCCCAACAGAAGCTGCTCGAGGCCCAGCAGTCGGCTGACGAGAACAACCGTATGTGCAAAGTGTTGGAGAACAGGGCACAGCAGGACGAGGAGCGTATGGACCAGCTCACCAACCAATTGAAAGAGGCCCGTCTCCTCGCCGAGGACGCTGACGGAAAATCCGACGAGGTTTCGCGAAAACTGGCCTTCGTTGAAGACGAACTCGAAGTCGCCGAAGACCGTGTCAAGTCTGGTGACGCTAAGATCTCAGAGCTTGAAGAAGAATTAAAGGTCGTCGGTAACTCCCTTAAATCTCTCGAAGTATCCGAAGAGAAAGCTAACCAGCGCGTCGAAGAGTTCAAGAAGCAGCTGAAGACCCTGACCGGCAAGCTGAAGGAGGCCGAGGCCCGTGCCGAGTACGCCGAGAAGACAGTCAAGAAACTGCAGAAGGAGGTCGACAGGCTCGAAGACGAGCTTGGCATCAACAAGGATAGATACAAGAGCTTGGCTGATGAGATGGATTCCACCTTCGCCGAGTTGGCTGGGAATCCCGGAAATCTGGCTGAAGCCTTTAACGTACTACCGGGCGCCATCACGATGAAGATATTGGCACCACACGATGGTCCTGATATCGCTCCCGTTGAAACATCGGGCGGATTGGAGACTGACACCATATGGGTGATGACCGTTGTCTTGGGCACTATCTTACTGGCCTTATGTGTGGGCATTGCTTGCTGGATCGTGCGCTTCAAGAGCTCCCTCTCTCATAAGCTGGGAAGCAAGCGTTGCCCGGACAAAGCGCTGGTGTTCCAGCCCCCTCGACGCGCCACCGCCGTCCGCTCCCCGGGTTCTGCCACCCATTACCTGCGCAAGTCTCCATCGCCGACCGCTCCTGCGCCACCAGCCGCTACGTCTCCCCCACAGCCACAACCGCCAACCCAGAATTCCGTCAAATCCGAGAAGGCGTCCTCTGCAAGCAACAGCCCAAACACCCCGACTGCCCCCACCGAGCCAACTCCGCTGAGCAAGGAGCTTGCCGACGTCCACGCCACTGAAAAGACCAAACCAACCGAACCGGAAACCAATGATGGAAGACTCGGCGATCTACACTTCAAGCTGCGATACGAGAATGAGAAGAACGCTCTGGTGGTGTCGGTGGTGTCGTGCCAGAACCTCCCGGGCCGCGAGCCAGCCGGACCTGACCCCTACGTCAAGCTTCAGCTACTCCCCGACAAACAGCACAAGGTTAAAACTAGGGTTGTCCGTAAGACCCGTTGCCCAGTTTACGATGAAGACTTCACCTTCTACGGTATCGCTCCGCATCAAATCGCCGGCATCACCCTGCACTTCGTGGTCCTCAGTTTTGATCGATACTCCCGGGACGAGATAATCGGCGAGGTCGTGTCTCCGCTGTCCAACCTCCAGCTCCACAGCGGCGAGGCCATGGCTCTGTGCCGCGAGATCCAACCGCGCAGCCTCAAGATGCGGTCGGCCGGTCGCGGCGAGGTGCTGGTGTCGCTGTGCTGGCAGCCGGCGGCGGCGCGCCTCACCGTGGTGCTGCTGAAGGCGCGCAACCTGCCGCGCATGGACCTCACCGGCCTCGCCGACCCCTACGTGAAAATGTATCTGCTGTACAACGGGCAACGCATCGCCAAGAAGAAGACCCACGTGAAGAAGCGCACCCTGAACCCGGTGTTCAACGAGTCGTTCGTGTTCGAGGTCCCGGCCGCGCCCAACGCCGCGCTCGACCACGTGTCGCTCGAGCTGCTCGTGCTGGACTGGGACCGCGTCACCAAGAACGAGGTGGGCCCTGCGCTTCCGTACTACGAGTCGAGATAA
Protein
MDAIKKKMQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQLTATEAEVAALNRKVQQIEEDLEKSEERSGTAQQKLLEAQQSADENNRMCKVLENRAQQDEERMDQLTNQLKEARLLAEDADGKSDEVSRKLAFVEDELEVAEDRVKSGDAKISELEEELKVVGNSLKSLEVSEEKANQRVEEFKKQLKTLTGKLKEAEARAEYAEKTVKKLQKEVDRLEDELGINKDRYKSLADEMDSTFAELAGNPGNLAEAFNVLPGAITMKILAPHDGPDIAPVETSGGLETDTIWVMTVVLGTILLALCVGIACWIVRFKSSLSHKLGSKRCPDKALVFQPPRRATAVRSPGSATHYLRKSPSPTAPAPPAATSPPQPQPPTQNSVKSEKASSASNSPNTPTAPTEPTPLSKELADVHATEKTKPTEPETNDGRLGDLHFKLRYENEKNALVVSVVSCQNLPGREPAGPDPYVKLQLLPDKQHKVKTRVVRKTRCPVYDEDFTFYGIAPHQIAGITLHFVVLSFDRYSRDEIIGEVVSPLSNLQLHSGEAMALCREIQPRSLKMRSAGRGEVLVSLCWQPAAARLTVVLLKARNLPRMDLTGLADPYVKMYLLYNGQRIAKKKTHVKKRTLNPVFNESFVFEVPAAPNAALDHVSLELLVLDWDRVTKNEVGPALPYYESR
Summary
Similarity
Belongs to the tropomyosin family.
Uniprot
EMBL
Proteomes
Gene 3D
ProteinModelPortal
PDB
1C1G
E-value=1.03524e-45,
Score=465
Ontologies
GO
Topology
Length:
713
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
27.68362
Exp number, first 60 AAs:
0
Total prob of N-in:
0.55815
inside
1 - 326
TMhelix
327 - 349
outside
350 - 713
Population Genetic Test Statistics
Pi
21.185898
Theta
21.499117
Tajima's D
-1.793724
CLR
1.867467
CSRT
0.0278486075696215
Interpretation
Uncertain
