SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12668  Validated by peptides from experiments
Annotation
mitochondrial_aldehyde_dehydrogenase_[Bombyx_mori]
Location
Bomo_Chr21(-):11136614-11139612      View in EpiBrowser
Location in the cell
Mitochondrial   Reliability : 1.86
 

Sequence

CDS
ATGTTGCGGAGCGTCTGCAAATTGGTTCAGGCGCAAAAAGCGAATTTTGCAACAGCTGCTTCAGCGGCACCGGCTCCCCAAACAAAACCGGAAATTTTATACACTGGTCTCTTCATAAACAATGAGTGGGTGAAGTCTTCTGATGGGAAGACCTTCAAAACTGAAAACCCTGCCAATGGCCAAGTTATAGCTGAGGTCCAACATGCCAACAAAGCAGATGTGGACAAAGCTGTGAAGGCAGCTAGAGATGCGTTCAAGTAA
Protein
MLRSVCKLVQAQKANFATAASAAPAPQTKPEILYTGLFINNEWVKSSDGKTFKTENPANGQVIAEVQHANKADVDKAVKAARDAFK

Summary

Similarity
Belongs to the aldehyde dehydrogenase family.
Uniprot
Q1HPM7  
EMBL
DQ443375    ABF51464.1   
PRIDE
Q1HPM7   
Pfam
PF00171   Aldedh
Interpro
IPR015590   Aldehyde_DH_dom        + More
IPR016162   Ald_DH_N       
IPR029510   Ald_DH_CS_GLU       
IPR016160   Ald_DH_CS_CYS       
IPR016163   Ald_DH_C       
IPR016161   Ald_DH/histidinol_DH       
SUPFAM
SSF53720   SSF53720       
Gene 3D
3.40.309.10     3.40.605.10    
ProteinModelPortal
Q1HPM7  
PDB
6B5I     E-value=4.91989e-06,     Score=113

Ontologies

KEGG
733015    K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3] | (RefSeq) mitochondrial aldehyde dehydrogenase
PATHWAY
00010    Glycolysis / Gluconeogenesis - Bombyx mori (domestic silkworm)
00053    Ascorbate and aldarate metabolism - Bombyx mori (domestic silkworm)
00071    Fatty acid degradation - Bombyx mori (domestic silkworm)
00280    Valine, leucine and isoleucine degradation - Bombyx mori (domestic silkworm)
00310    Lysine degradation - Bombyx mori (domestic silkworm)
00330    Arginine and proline metabolism - Bombyx mori (domestic silkworm)
00340    Histidine metabolism - Bombyx mori (domestic silkworm)
00380    Tryptophan metabolism - Bombyx mori (domestic silkworm)
00410    beta-Alanine metabolism - Bombyx mori (domestic silkworm)
00561    Glycerolipid metabolism - Bombyx mori (domestic silkworm)
00620    Pyruvate metabolism - Bombyx mori (domestic silkworm)
00981    Insect hormone biosynthesis - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
GO
GO:0016620   GO:0008152   GO:0016491   GO:0009165   GO:0009156   GO:0044249   GO:0006428   GO:0000049   GO:0006508   GO:0016286   GO:0055114  

Topology

Length:
86
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00095
Exp number, first 60 AAs:
0.00095
Total prob of N-in:
0.39675
outside
1  -  86
 
 

Population Genetic Test Statistics

Pi
7.31454
Theta
15.028053
Tajima's D
-1.420257
CLR
3.043464
CSRT
0.0708964551772411
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 ATAASAAPAPQTKPEILYTGLFINNEWVK 100.00 4e-05
28556443 ATAASAAPAPQTKPEILYTGLFINNEWVK 100.00 4e-05
28556443 ANNSEYGLAAAVFTK 100.00 4e-05
28556443 VVGDPFRPDVEQGPQIDNEQR 100.00 4e-05
26822097 IGSPWR 100.00 5e-05
26280517 TAPTATGDITQIINSIQTAVK 100.00 5e-05
28556443 TENPANGQVIAEVQHANK 100.00 5e-05
28556443 TEIFGPVQQILK 100.00 5e-05
28556443 TEIFGPVQQILK 100.00 5e-05
26280517 TDPFQFYVGCCEGR 100.00 5e-05
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