Gene

KWMTBOMO12663

Annotation

PREDICTED:_ubiquitin-conjugating_enzyme_E2_J2-like_[Bombyx_mori]

Location

Bomo_Chr21(-):11029357-11030292      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.545 Extracellular   Reliability : 1.373

CDS

ATGGCAAAAACAAAGGTGACAGGAGCCACTAGCAGATTGAAGCAGGATTATTTGAGGCTCAAGAATGACCCAGTACCATATGTTACGGCCGAACCTGTGCCGTCCAACATACTGGAATGGCATTACGTCGTTAAAGGGCCGGAGAAAAGTCCCTACGAAGGGGGATATTATCATGGAAAGATTATTTTCCCAAGGGAATTTCCGTTCAAACCACCTTCGATTTACATGATAACACCGAATGGCAGGTTCAAGACAAACACACGATTGTGCCTCAGTATTACAGACTTTCATCCGGACACTTGGAACCCTGCTTGGTCTATTTCTACGATCCTTACAGGTCTGTTGAGTTTTATGTTGGAGAAGACTCCTACATTGGGGTCCATTGAAACTTCAGAATACCAAAAGCGATGTTTGGCTGCAGAATCTCTAGAGATAAACATAAAAAATAAAATGTTTTGTGAATTGTTCCCTGAATATGTAGAGGAGATTGAACAGCAATTAAAACAACGACAAGAGGCAATGTTGTTGAATCAAGACAGTGGTGCAAATGAAGTAACCTCTGAGCCACAGTCTAGTATGAATTGTATTTTGACAAATCTGTTTGTTCTTGTAGCTTTTGTATGCCTTACTTACATGGTCAAACATGTTTTAGGATCATATGAATAG

Protein

MAKTKVTGATSRLKQDYLRLKNDPVPYVTAEPVPSNILEWHYVVKGPEKSPYEGGYYHGKIIFPREFPFKPPSIYMITPNGRFKTNTRLCLSITDFHPDTWNPAWSISTILTGLLSFMLEKTPTLGSIETSEYQKRCLAAESLEINIKNKMFCELFPEYVEEIEQQLKQRQEAMLLNQDSGANEVTSEPQSSMNCILTNLFVLVAFVCLTYMVKHVLGSYE

Uniprot

A0A437BUX2   A0A2A4IUK0   A0A194RDX0   A0A212FFR1   A0A2H1VRZ5   A0A1E1WKW5   + More
A0A0L7L475   A0A194QCH7   A0A1W4XIV8   E2C2E8   A0A154NY32   A0A195BBH2   A0A158NAC2   A0A195FUM5   F4WJU7   A0A026WS21   A0A151X4K6   E2AF39   A0A2A3EQF4   V9IKK9   A0A087ZP05   A0A0M8ZY93   A0A0L7R0I7   R7V2C0   A0A2I4AQ33   A0A1A8C6Q5   A0A1A8GQ49   A0A1A8UXE2   A0A1A7X1C7   A0A2U9BGH4   A0A3Q2ZDJ8   D6WL86   A0A1A8IXC1   A0A3Q4HBY8   A0A3Q2QCV1   I3KTC9   A0A1A8RSA6   A0A1A8QZ37   A0A3B4FDC8   A0A3Q2W8X7   A0A3P8P6W1   A0A3P9DPG5   T1G6I2   A0A2J7QC68   H2TQI9   A0A3Q0S9G5   T1DKC1   A0A1Y1NAT8   A0A3Q1JP65   J3S5E7   A0A067R6N3   G3NYP6   A4QNV0   A0A146ZZY4   A0A1S3EYW0   A0A3Q3KDS2   E6ZFF4   A0A3B3DSS1   A0A3Q2CXW9   A0A2F0BAN9   A0A383YUA5   A0A2Y9FRG8   A0A341CN21   A0A340WMT5   A0A2Y9QFP4   A0A250YDR8   A0A1U7R1S1   A0A1U7SRT9   W5M2U3   F7A451   A0A3Q3MPP6   J3JVN7   M7ASW0   G1M4W6   A0A3Q7Y9G0   H9GNU4   A0A1B6C965   G3I416   K9IHA1   A0A0P7UX40   A0A3B3S3P3   A0A0P6JAD1   A0A1U7RF38   A0A3B5PVL1   A0A3B5MHH0   A0A0G2K8C5   A0A1S2ZWQ9   L8J1R3   A0A452EJX9   F6TU09   A0A1W7RBZ6   A0A0S7GCT4   B1ASK8   A0A2Y9KA75   A0A3Q7U6A6   A0A0F8AK68   W5P6H1   A0A091MYV6   M3YRS2   A0A060YEI6  

Pubmed

26354079    22118469    26227816    20798317    21347285    21719571    + More
24508170    30249741    23254933    18362917    19820115    25186727    21551351    23758969    28004739    23025625    24845553    23594743    29451363    28087693    17495919    22516182    23537049    23624526    20010809    21881562    21804562    29240929    23542700    15057822    15632090    22751099    19892987    26358130    12040188    19468303    21183079    25835551    20809919    24755649   

EMBL

RSAL01000006    RVE54267.1    NWSH01006503    PCG63391.1    KQ460325    KPJ15797.1    + More
AGBW02008777    OWR52568.1    ODYU01003897    SOQ43232.1    GDQN01003439    GDQN01001317    JAT87615.1    JAT89737.1    JTDY01003039    KOB70272.1    KQ459193    KPJ03124.1    GL452124    EFN77898.1    KQ434781    KZC04491.1    KQ976528    KYM81883.1    ADTU01001464    KQ981264    KYN43992.1    GL888186    EGI65589.1    KK107119    QOIP01000009    EZA58743.1    RLU18829.1    KQ982544    KYQ55346.1    GL438984    EFN67994.1    KZ288204    PBC33271.1    JR051790    AEY61560.1    KQ435798    KOX73377.1    KQ414670    KOC64360.1    AMQN01005351    KB295796    ELU12627.1    HADZ01010812    HAEA01009619    SBP74753.1    HAEB01019236    HAEC01005051    SBQ73128.1    HADY01021169    HAEJ01012612    SBS53069.1    HADW01010330    HADX01000039    SBP11730.1    CP026248    AWP03113.1    KQ971343    EFA03490.1    HAED01015537    HAEE01013784    SBR01982.1    AERX01006852    HAEI01008080    HAEH01018711    SBS08114.1    HAEF01000210    HAEG01014890    SBR98777.1    AMQM01006822    KB097528    ESN95317.1    NEVH01016291    PNF26179.1    GAAZ01002792    JAA95151.1    GEZM01007641    GEZM01007640    JAV95024.1    JU176384    GBEX01003798    AFJ51907.1    JAI10762.1    KK852665    KDR18969.1    CR926464    BC139531    AAI39532.1    GCES01014432    JAR71891.1    FQ310506    CBN80904.1    NTJE010119119    MBW00051.1    GFFW01003025    JAV41763.1    AHAT01034620    AHAT01034621    AHAT01034622    APGK01021343    BT127305    KB740314    KB631743    AEE62267.1    ENN80907.1    ERL85714.1    KB585326    EMP25990.1    ACTA01044646    AAWZ02035685    GEDC01027324    JAS09974.1    JH001219    EGW07777.1    GABZ01007505    JAA46020.1    JARO02001701    KPP74669.1    GEBF01002989    JAO00644.1    AC126156    CH473968    EDL81345.1    JH880456    ELR61367.1    LWLT01000016    GDAY02002800    JAV48667.1    GBYX01455557    JAO25979.1    AL627204    CH466594    EDL15061.1    KQ041937    KKF20793.1    AMGL01021967    KK838948    KFP81852.1    AEYP01101970    FR909979    CDQ89932.1   

Proteomes

UP000283053    UP000218220    UP000053240    UP000007151    UP000037510    UP000053268    + More
UP000192223    UP000008237    UP000076502    UP000078540    UP000005205    UP000078541    UP000007755    UP000053097    UP000279307    UP000075809    UP000000311    UP000242457    UP000005203    UP000053105    UP000053825    UP000014760    UP000192220    UP000246464    UP000264800    UP000007266    UP000261580    UP000265000    UP000005207    UP000261460    UP000264840    UP000265100    UP000265160    UP000015101    UP000235965    UP000005226    UP000261340    UP000265040    UP000027135    UP000007635    UP000000437    UP000081671    UP000261600    UP000261560    UP000265020    UP000261681    UP000248484    UP000252040    UP000265300    UP000248483    UP000189706    UP000189704    UP000018468    UP000002280    UP000261640    UP000019118    UP000030742    UP000031443    UP000008912    UP000286642    UP000001646    UP000001075    UP000034805    UP000192224    UP000261540    UP000189705    UP000002852    UP000261380    UP000002494    UP000079721    UP000291000    UP000002281    UP000000589    UP000248482    UP000286640    UP000002356    UP000000715    UP000193380   

PRIDE

G3I416   

Pfam

PF00179   UQ_con

Interpro

IPR000608   UBQ-conjugat_E2        + More
IPR016135   UBQ-conjugating_enzyme/RWD       

SUPFAM

SSF54495   SSF54495       

Gene 3D

3.10.110.10    

CDD

cd00195  UBCc

ProteinModelPortal

A0A437BUX2   A0A2A4IUK0   A0A194RDX0   A0A212FFR1   A0A2H1VRZ5   A0A1E1WKW5   + More
A0A0L7L475   A0A194QCH7   A0A1W4XIV8   E2C2E8   A0A154NY32   A0A195BBH2   A0A158NAC2   A0A195FUM5   F4WJU7   A0A026WS21   A0A151X4K6   E2AF39   A0A2A3EQF4   V9IKK9   A0A087ZP05   A0A0M8ZY93   A0A0L7R0I7   R7V2C0   A0A2I4AQ33   A0A1A8C6Q5   A0A1A8GQ49   A0A1A8UXE2   A0A1A7X1C7   A0A2U9BGH4   A0A3Q2ZDJ8   D6WL86   A0A1A8IXC1   A0A3Q4HBY8   A0A3Q2QCV1   I3KTC9   A0A1A8RSA6   A0A1A8QZ37   A0A3B4FDC8   A0A3Q2W8X7   A0A3P8P6W1   A0A3P9DPG5   T1G6I2   A0A2J7QC68   H2TQI9   A0A3Q0S9G5   T1DKC1   A0A1Y1NAT8   A0A3Q1JP65   J3S5E7   A0A067R6N3   G3NYP6   A4QNV0   A0A146ZZY4   A0A1S3EYW0   A0A3Q3KDS2   E6ZFF4   A0A3B3DSS1   A0A3Q2CXW9   A0A2F0BAN9   A0A383YUA5   A0A2Y9FRG8   A0A341CN21   A0A340WMT5   A0A2Y9QFP4   A0A250YDR8   A0A1U7R1S1   A0A1U7SRT9   W5M2U3   F7A451   A0A3Q3MPP6   J3JVN7   M7ASW0   G1M4W6   A0A3Q7Y9G0   H9GNU4   A0A1B6C965   G3I416   K9IHA1   A0A0P7UX40   A0A3B3S3P3   A0A0P6JAD1   A0A1U7RF38   A0A3B5PVL1   A0A3B5MHH0   A0A0G2K8C5   A0A1S2ZWQ9   L8J1R3   A0A452EJX9   F6TU09   A0A1W7RBZ6   A0A0S7GCT4   B1ASK8   A0A2Y9KA75   A0A3Q7U6A6   A0A0F8AK68   W5P6H1   A0A091MYV6   M3YRS2   A0A060YEI6  

PDB

2F4W     E-value=2.09885e-76,     Score=724

KEGG

101745295    K04554 ubiquitin-conjugating enzyme E2 J2 [EC:2.3.2.23] | (RefSeq) ubiquitin-conjugating enzyme E2 J

PATHWAY

04120    Ubiquitin mediated proteolysis - Bombyx mori (domestic silkworm)
04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0005783   GO:0030433   GO:0000209   GO:0061631   GO:0031625   GO:0000151  

Length:

221

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.45101

Exp number, first 60 AAs:

0.00057

Total prob of N-in:

0.92725

inside

1  -  195

TMhelix

196  -  213

outside

214  -  221

 

 

Pi

12.500897

Theta

11.487387

Tajima's D

-0.508295

CLR

0

CSRT

0.237538123093845

Interpretation

Uncertain