Silkworm Genome Informatics Database

Gene

KWMTBOMO12662 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001576

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_centrosome-associated_zinc_finger_protein_CP190_[Bombyx_mori]

Location

Bomo_Chr21(+):11020493-11025022 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.166

CDS

ATGTCGGAGTTAAGGCAAGTGAAAGTGGATAACTGGGGAATTTATTTCCTCCAAAGGTTAAAACATTTCTTTAACCGCACTGACTATTGTGATTTAACGCTACAATTCCAAGACAACGCACAGTTGAAAGTCCACAGACTGGTTTTAAATGCTTGTACAGAATATTTTGAAGTTTTGGAGAGAACATGCGAAATGTATGAAGATTGTCTCGTGATGCCGGACGATCTTCAGGCTGATGTCGTTGTACCTATAGTGAACTTCATGTACACTGGACAATTAGAGTTCAGGTTGGATTTACTTGAGAAACTTTACCAAACTTCTCTCATTATGAAAATGCCTGTGCTAACTAAACTTCTGAAAGCTCACCGTGCCAGTCAGAATCCACAGTGCTATGCTCCAAAACATAAAAGCTCTGAACCTACTCCATCTACTAGTAATAAACGCTCATATGGTAAAGCTTTTGACAACAAGAGTGCATGCAAAGAGAAAAAAGTATATAAACCTGTGAATATAAATAAAGAAATAATGTACCGTCCATCATCTCCTTATATACAAAATAAAAAAAATCTAATGACAGATCCAAAACCTACAAGATATGAGCTATCAGAAGAGTTTGATGGTGATGGGGTGTTTGACAGTTCCTTCTGTAACATATCCTATACATCTCAACCGTTGATGGTACATCCTGACACTAAGAAGCGTTACTCTAAAAAAAGTGGTCTGTTCAATAATTCTTCAAGTGATAGTAAACACACAACAACTTTAGACATTATAGAATGTAAGAAAAGTGTTGATAACATCTTTGAAGATAATTACTTGGAGAGTGGTATACTTGATGAAAATGAGATGTTCCAAACAACATATTTAAAGAAGAATAAACCAATTATGGACTCCAATCAACTCTTTGATCAGATTTTAGATCAGAATGATGCTCCTAAAATAACAATAGACACTAAAAACAGTAAAGTATCTGCAAATCTTGATCATGCTAAAATAATAAGTGAAGTTTTAAAGAAATACTCTCATTTATTGAAAGGTAGTAAAAATATCAAATTGAAAATATTAAACACTCCAAACAAAAAGAAGCAATCCACTGTTCGTGAACAGAAAAATTCTCAGCAGAAAGTTGAAAGACATGATTCTAACTTCACCTATGAGACTGATGTCATAGATTCAAAGCATGCAGCTAAGTTAATAGCAATGGGGGCAGAGAACATTAATGGACCTTGGATATGCCTTATATGTGGAACACCAGGCAAAGCATTGCATTTTATGTCATATTATAAATTCCGAAGACATCTAGTTGAAGTGCACAATGAAAAACCAGTAGTCAATATATGTGAATATTGTGGATATAAGGCATTAAAAAGAAATTATCATCTTTACCATCTATATACAAAACATGGGATTGAGCCACCACCAACATATAATTTCCCAAAATGTAATCAATGTAATTATGTAGCTATGGGTGAAGGATATTTAATGAAACATAAGTTAACACATTCAACTGTGAGCTTTCAGTGTAATGTTTGTGCTACACACTTTAGTTCATCAAATTTACTTCTCCAGCACATTCAAAGGACAGGTCACAAATATTCTGCTGATAGAAAACACAACCTTCAATGTATGTATTGCCTAAAAGTCTTCTTACGTGAAAGCAGCCTATATAATCATCTGAAAACATGTCACAAAAAAGAGGATAAATCGAGTGGCATCATTGATGACTCAGATGAAGAAAAATCAAAAGATAAAAAACCTAAATTGGAGTTAGAGATTGAGATTCCCCCAGTTCGTTCACATGACTATGAAGAAGTTAATGTACACTATCAAATTCAACCAGACGGAAATATCCATGTTATTCCTAATGGTGAAATAAAAGCACCTTTAAATCAGAAGCATAAAATACTTAATCCTGAATTCAACTTAGTTAAACCCAAACAAATATACAAAGAAAACAGTAACATAATTAACAATGTTACTACGTCTCTGCAAAAAGGTCATGTTCAAGAAGACAATAGTAATGTTATTACAAATGAAGAAATTGTTATGATAGATGACAGAGAGTACATCCTGAAAGATAATCAGCTTATACCAAGATCAACCAAAAATGCTGAACCAGAATTCATCATCCCAGAAATGTTGCATTCAGAACCAGTGCAACAAACATCTACCTCTACAACTCAGTTAGACTATACAAATTTAATAGAAACTGTAAATGAATCTAATGTCATCCTGAGTAAGCAAACAAACTTAAATCAACCCATCCAGTTTGTTGTTTCTAATGAAGAAGAATATAAAGCATTAATGACTGCAAACCATCCAATTCTTTTTGATAATGGTGATTCTAACAAAACGTTAGCTGTTTTATCCAACCCCCACACCTCCAATGTAGAATCAACGAGTATGGAACTTGACAACACTCAGTCAAATGATATAATGATCATACAAGAAAATTACCCATTAAATGTAACAGAGTCAGTTGTAACGGACAATTCAAACATAGTAGTAGTTTATAGCCATCCTGTTGATAGCACAAACAAACAATTCCAAATTCTGACTACACAAGGAATAGGAACACAGTTAATACAATCATCAGCTATAATTACGCAAAACTTCGAGACTGTCACTACTACTGCACCGGTCATGAATGCTCACGTAATTGAGAGTCAAGAATGGGAAAATGACATAACTCCAATGCCTGTTAGTAACAAACCAAATGCTGACTTAGAAAAAACTGGACAAAATACACCTCAAATGACATCTCATCAAAGTGTAATTGTTTCGCCTGAGGTTCAAGTCCCCCCTAAACCACCTTCACCAGTAGATATGGATGTAGAAGAAACCATACAAAGTAAATTAATAAATGAGCCAATTCAGGAAAATAATGAAAAATGCACACAAAGTGAGACATTGCCGGCTACAACAATTACACCCATTACAGATTCAAGCAATCCTACTCAAGGGACGATAGTGGAAAACATGATCATCAATGAACAGCTTACAGAAGAATCAAGTGAAAATCTTCCTACAGTTGAAGAAAATCTAGAGAATATTGATAAAAATTCAACTAAATCAAAACTTATTCTAGATTGTAATACTAAAATGGGATTAAATGATATCAGCGAAAACCTCATAGACAAAGAAGAGAATATTTGTAGTCCAACATTTACACAACAAACAGATTTAAGTTTAGAAAATAATGTTGATTCTATAAGTCAAGATTCAGCTGAGGAAATTGTACAATGTGAAGTATCACTGTCTGCGCAAGCAGTACCAAAAGCAGCTGAGGAAAAAATTCAAATATTGACATCAGAATGGTCAGAAGATGAGTACGATTCTCCACCAGCAATCAATGATAATAAAGTAATTTGTGAAGACTCTAAAGAGATATTAACAAAATCAACTGAAACGCCTCAAAATATTGAAGAGGGAACTGTGAACACTGAGTCTCTCTTACCTGAAAATTTAAATGAGCCAACTGAATCTGCAAAACCTGAGAGCCCAAACAAACAAACAACTAAAATTCCAAATGATAACATATCATCTCTGCTAAGTGACTGGGAAGACTCGCAAGAAGATTTGAGTAGCAATGACGAAAATATTGATAATATATTACCAAAAGAGTATGAAGAAAAATTGCGAAATGATTTACCCGATTACAATATACAAAATATTGATAGAGGTTTACCCAATCTGAATGATGAGAAAGATGATGAGGATCTAATAAAAGTTAGCAAAGAAAAGGTACATAATGACCTAACAAACGCAGATGAGAAAACAGATATTTGCTTGACAAAAGACAGTGAAGGAATATCTGACAGTGGTCTGCCAAAAAGGAACAGGGAAGAAATGGGTGACCCTTTACATGTTAAGCAAATCGAAAATGTATTAGCAAATATAAATGAAGGGATAGTTTCCACTGAATGTAATAATCGTACAGAAAAAGTTATTCTAGATGAACCAAATAGTGGACTTTTAGAAACAGCTGAGAAAAAAGCTTCACATGATCCTGCACCAGATAATGAAACCGATAAACCAGATGACAAAATAAAAAGTTTAGTCAGTGATTGGGATGATGACGATGAGGAAAGTAAAATCAATTAA

Protein

MSELRQVKVDNWGIYFLQRLKHFFNRTDYCDLTLQFQDNAQLKVHRLVLNACTEYFEVLERTCEMYEDCLVMPDDLQADVVVPIVNFMYTGQLEFRLDLLEKLYQTSLIMKMPVLTKLLKAHRASQNPQCYAPKHKSSEPTPSTSNKRSYGKAFDNKSACKEKKVYKPVNINKEIMYRPSSPYIQNKKNLMTDPKPTRYELSEEFDGDGVFDSSFCNISYTSQPLMVHPDTKKRYSKKSGLFNNSSSDSKHTTTLDIIECKKSVDNIFEDNYLESGILDENEMFQTTYLKKNKPIMDSNQLFDQILDQNDAPKITIDTKNSKVSANLDHAKIISEVLKKYSHLLKGSKNIKLKILNTPNKKKQSTVREQKNSQQKVERHDSNFTYETDVIDSKHAAKLIAMGAENINGPWICLICGTPGKALHFMSYYKFRRHLVEVHNEKPVVNICEYCGYKALKRNYHLYHLYTKHGIEPPPTYNFPKCNQCNYVAMGEGYLMKHKLTHSTVSFQCNVCATHFSSSNLLLQHIQRTGHKYSADRKHNLQCMYCLKVFLRESSLYNHLKTCHKKEDKSSGIIDDSDEEKSKDKKPKLELEIEIPPVRSHDYEEVNVHYQIQPDGNIHVIPNGEIKAPLNQKHKILNPEFNLVKPKQIYKENSNIINNVTTSLQKGHVQEDNSNVITNEEIVMIDDREYILKDNQLIPRSTKNAEPEFIIPEMLHSEPVQQTSTSTTQLDYTNLIETVNESNVILSKQTNLNQPIQFVVSNEEEYKALMTANHPILFDNGDSNKTLAVLSNPHTSNVESTSMELDNTQSNDIMIIQENYPLNVTESVVTDNSNIVVVYSHPVDSTNKQFQILTTQGIGTQLIQSSAIITQNFETVTTTAPVMNAHVIESQEWENDITPMPVSNKPNADLEKTGQNTPQMTSHQSVIVSPEVQVPPKPPSPVDMDVEETIQSKLINEPIQENNEKCTQSETLPATTITPITDSSNPTQGTIVENMIINEQLTEESSENLPTVEENLENIDKNSTKSKLILDCNTKMGLNDISENLIDKEENICSPTFTQQTDLSLENNVDSISQDSAEEIVQCEVSLSAQAVPKAAEEKIQILTSEWSEDEYDSPPAINDNKVICEDSKEILTKSTETPQNIEEGTVNTESLLPENLNEPTESAKPESPNKQTTKIPNDNISSLLSDWEDSQEDLSSNDENIDNILPKEYEEKLRNDLPDYNIQNIDRGLPNLNDEKDDEDLIKVSKEKVHNDLTNADEKTDICLTKDSEGISDSGLPKRNREEMGDPLHVKQIENVLANINEGIVSTECNNRTEKVILDEPNSGLLETAEKKASHDPAPDNETDKPDDKIKSLVSDWDDDDEESKIN

Uniprot

A0A2A4IW28 A0A0L7L4R9

Pubmed

26227816

EMBL

NWSH01006503 PCG63392.1 JTDY01003039 KOB70269.1

Proteomes

UP000218220 UP000037510

Pfam

PF00651 BTB

Interpro

IPR036236   Znf_C2H2_sf        + More
IPR011333   SKP1/BTB/POZ_sf
IPR000210   BTB/POZ_dom
IPR013087   Znf_C2H2_type

SUPFAM

SSF57667 SSF57667 + More
SSF54695 SSF54695

ProteinModelPortal

A0A2A4IW28 A0A0L7L4R9

PDB

6ER1 E-value=3.20823e-46, Score=472

KEGG

101745145 no KO assigned | (RefSeq) centrosome-associated zinc finger protein CP190

GO

GO:0003676 GO:0046872 GO:0005515 GO:0051082 GO:0009165 GO:0009156 GO:0044249 GO:0006428 GO:0000049 GO:0006508 GO:0016286

Length:

1367

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.008

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00039

outside

1 - 1367

Pi

5.403254

Theta

7.148628

Tajima's D

-0.825997

CLR

0.871969

CSRT

0.167591620418979

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics