SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12660
Pre Gene Modal
BGIBMGA001405
Annotation
Uncharacterized_protein_OBRU01_22425_[Operophtera_brumata]
Location in the cell
Nuclear   Reliability : 3.367
 

Sequence

CDS
ATGAGTTCCGTGCAAGAAGAGAAAGTACCTACAGAGACGTCAAACAAAACTCACGTACGGGATATACGGAACACAGAATTGGTATCGCGACTTTTGGCCGCTACCCCTCCATATCTATATAGCGCTTTACCACTACAACCGCATGCCTTCTTCTTCAGTGAAATGTTAAGGTCCTTCGTCAACGCACGGCATGGTTGTAGACCCCCTCATTACCAACGCCGTTTCAAACGTCGAACGCATAAATATTTTGCCGAGAACGAAACAGATTGGCGTCGAGAATGGCCGAAGCAGGAGGAAGAGAAGAAAGAGCACGAGCCACGACCGGAAGTACCGCTAGAATTAACTGTAGAAAAACACGCTAGGATTCAAGATTCTTTGTCTAGAAGTTTGTCACCAAAACCAGATCTTGCAAAATCGAGCGGCAGTCCTGGTCCTCCGGGAAGACAGTCTACCTTTGTCGATGTCGGCACCGAAGAGCTACCAAAGCCCGCTCCATCTGCTGGTCGGAATACAACTGACAGTGGCCTTCCTCCTTCCAACTTAATCTTGCCTCCGCCGCCACCAATGTGGTACCCTCCGTTATACAATCCCCAATTCGGTGTTGATCCTCTGAACTTCTTTATAGACCTACGAGTTTCAGGTCATATTTACGATAGAAAACGGGTCGCGCCTGACAATGTTGATGTTAGTCAAACCGACGACCCTGAAAAGCGTTTGGGTCGCGACTTCGGGAGGAGACATCTGTCTGCTTTCTCCGTGCCCGTAAGGTCCAACAACGGTACGCCCGATAAAATTTTCAATCAAAATAAAATTGGGAAGGCGAACGGCACTTCGTATGTTATGAAGAATTTAAAACGGGTCTATGATAACCTGAATAATGTGCGTGACACTGAAGGCTCGAAGGTCAATAACGATGATGAAGACAGAGATGAGAAACTCGAGTCATCGGATGTTGAAGATGATGTGATTGACTAA
Protein
MSSVQEEKVPTETSNKTHVRDIRNTELVSRLLAATPPYLYSALPLQPHAFFFSEMLRSFVNARHGCRPPHYQRRFKRRTHKYFAENETDWRREWPKQEEEKKEHEPRPEVPLELTVEKHARIQDSLSRSLSPKPDLAKSSGSPGPPGRQSTFVDVGTEELPKPAPSAGRNTTDSGLPPSNLILPPPPPMWYPPLYNPQFGVDPLNFFIDLRVSGHIYDRKRVAPDNVDVSQTDDPEKRLGRDFGRRHLSAFSVPVRSNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDDVID

Summary

Interpro
IPR017426   Nuclear_rcpt_coactivator       

Ontologies

GO

Topology

Length:
324
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.828759999999999
Exp number, first 60 AAs:
0.82827
Total prob of N-in:
0.05252
outside
1  -  324
 
 

Population Genetic Test Statistics

Pi
16.866394
Theta
18.855142
Tajima's D
-0.334955
CLR
1.233309
CSRT
0.284985750712464
Interpretation
Uncertain
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