Gene

KWMTBOMO12659  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001406

Annotation

PREDICTED:_T-complex_protein_1_subunit_gamma_[Amyelois_transitella]

Location

Bomo_Chr21(-):10949191-10957589      View in EpiBrowser

Full name

T-complex protein 1 subunit gamma      

Alternative Name

CCT-gamma
Chaperonin containing TCP1 subunit 3

Location in the cell

Cytoplasmic   Reliability : 3.545

CDS

ATGTATGGACAGCAACCTATATTAGTTCTCAGCCAAAATACAAAACGTGAGTCCGGCCGGAAAGTTCAGCTTGAAAATATTAGTGCAGGAAAGACCATAGCCGATGTTATAAGAACATGCCTCGGACCTCAGGCCATGTTAAAAATGTTAATGGACCCTATGGGAGGCATCGTGATGACCAACGATGGTAATGCTATACTCAGGGAAATCACAGTCCAACATCCAGCTGCAAAATCTATGATCGAAATCGCAAGGACCCAAGATGAAGAGGTTGGAGATGGAACCACATCAGTCATAGTGCTAGCAGGAGAAATGTTGGCGATTGCAGAACCTTTCTTGACACAGAATATTCATCCAACAGTCATCATCAGAGAATACCGCCAAGCTTTAGAGGATGCTATAGTTCTGCTTCAAGACAAAATTTCAGTGCCTGTAGATTTGAATGATAGAGATAAGATGAAAGAAGTTATTCGTTCATGTGTTGGAACAAAGTACATCGGTCGTTGGGCAGATCTTGCCGTAGACATTGCTCTTGATGCGGTTAATACTGTTACTGTGAATGATAATGGCAGAATTGAGGTTGACATTAAAAATTATGCAAAAGTGGAAAAGATCCCAGGTGGCACAGTTGAAGAGTCTCGTGTACTCAGCGGTGTTATGTTCAACAAGGATGTAACCCATCCAAAGATGAGGAGGTATATTGAAAATCCGCGCATTATCCTGTTGGATTGCCCACTTGAATACAAAAAGGGAGAGAGTCAGACCAACATTGAGATTATGGGTGAACAGGACTTCACTAAACTGCTACAACTAGAAGAGGAACATGTACAGCGTCAATGTGAAGAAATTATTGCACTTAAACCAGATATTGTCTTTACCGAAAAGGGAGTTTCAGATCTTGCACAACATTACCTTGTTAAGGCTGGAATTACTGCTATCCGCAGACTCCGTAAAACGGACAACAACCGTCTAGCGCGGGCGTGTGGAGCAACAATTGTCAACCGTACTGAGGAACTCAAGGAATCCGATGTCGGCACTGGAGCTGGACTGTTTGAGATCAAGAAGATCGGAGATGAATATTTCACTTTTGTCACTGAATGCAAGAACCCCAAGGCATGCACAATATTACTCCGTGGTGCTTCTAAGGATGTCCTGAATGAGATTGAAAGGAATCTTCAAGACGCTTTACACGTCGCCAAGAATTTGGTGGTGTCGCCGCGGCTGGTGGCGGGGGGCGGCGCCGCGGAGATGGCCGTGTCCAGCGCGCTGTCGCACCGCGCCGCGCACAACACGCCCTACAGGGCCGTCGCCACCGCGCTCGAGATAATACCGCGCACGCTGGCGCAGAACTGCGGCGCCAACACCATCCGCACGCTCACGGCGCTGCGGGCGCGCCACGCCGCCGGACTCGCCTCCGCCGGCATCGACGGCGAGACCGGCGAGATCGTCGACATGGCCGTCAAGGGGATCTGGGAGCCGCTCGCCGTTAAACTGCAGGTGTACAAAACAGCCGTCGAAACAGCGATCCTGCTGTTGAGGATCGACGACATCGTGTCGGGCTCCAAGAAGAACAAGAACAACGAGCCCGCGGCGCCGGCCGAGATGGCCGCACAAGAAAACTAA

Protein

MYGQQPILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISVPVDLNDRDKMKEVIRSCVGTKYIGRWADLAVDIALDAVNTVTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEYKKGESQTNIEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDLAQHYLVKAGITAIRRLRKTDNNRLARACGATIVNRTEELKESDVGTGAGLFEIKKIGDEYFTFVTECKNPKACTILLRGASKDVLNEIERNLQDALHVAKNLVVSPRLVAGGGAAEMAVSSALSHRAAHNTPYRAVATALEIIPRTLAQNCGANTIRTLTALRARHAAGLASAGIDGETGEIVDMAVKGIWEPLAVKLQVYKTAVETAILLLRIDDIVSGSKKNKNNEPAAPAEMAAQEN

Subunit

Heterooligomeric complex of about 850 to 900 kDa that forms two stacked rings, 12 to 16 nm in diameter.

Similarity

Belongs to the TCP-1 chaperonin family.

Keywords

ATP-binding   Chaperone   Complete proteome   Cytoplasm   Disulfide bond   Nucleotide-binding   Reference proteome  

Feature

chain  T-complex protein 1 subunit gamma

Uniprot

H9IVX5   A0A2A4K5S4   A0A2H1VVJ7   A0A194QCD3   A0A437BUX5   S4P6K3   + More
A0A2A4K7F4   W8B4Z1   A0A0A1WIQ5   A0A1Q3F384   A0A0K8UAV7   A0A0K8UQQ5   A0A034WB81   D1MDB9   A0A1L8ED77   B4LYG9   A0A1I8PYY9   A0A0L0BZX0   B4JG86   B0WSS5   A0A2M4A9B6   A0A2M4BJ12   A0A2M4BIY0   T1DSF4   B3M2K6   W5JIM5   A0A2M4BJ89   B4NJH6   A0A2M3Z6J9   A0A182G413   B4QWG0   A0A182P508   B4IBR9   Q16U15   A0A182M7U0   B4KAH9   Q297K0   A0A182VZQ2   A0A182F7D7   A0A3B0KAP5   A0A1W4UIV4   A0A182JW08   B3NZC4   A4V303   B4PMX4   P48605   A0A182RSY6   H6WAS3   A0A182NQG8   A0A182V0W7   A0A182LBZ2   A0A182XIU3   Q7QCQ5   A0A182HTH8   U5EM51   T1PFL6   A0A2P8YVF8   A0A0M5JC34   A0A182TLD8   D3TN28   A0A1A9WLU5   A0A1A9Z9W2   A0A1B0AS37   A0A182QK37   A0A182S668   A0A336MCC4   A0A1A9YHY4   A0A1A9VPD4   A0A2J7QC12   A0A084VTB1   A0A067RMU1   D6WRF8   A0A182J815   J3JVZ0   A0A1L8DUF6   V5RDL0   A0A0K8TS67   V5GRT0   A0A026W022   A0A1B6DCI8   A0A1B0GLJ4   E9IDA8   F4WXK8   A0A0J7KP09   A0A0L7R5R3   A0A151WTF3   N6TQ76   A0A195BVI5   E2BLS8   A0A158NUY2   A0A195D9R4   A0A1Y1JY21   A0A088A3C0   A0A1L8DUE6   A0A0C9Q0G4   A0A195FRP0   T1JFU3   E2A4G2   A0A154PBM0   A0A411G6C6  

Pubmed

19121390    26354079    23622113    24495485    25830018    25348373    + More
19936241    17994087    26108605    20920257    23761445    18057021    26483478    17510324    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    7667301    8666276    12537569    23055932    25244985    20966253    12364791    14747013    17210077    25315136    29403074    20353571    24438588    24845553    18362917    19820115    22516182    26369729    24508170    30249741    21282665    21719571    23537049    20798317    21347285    28004739   

EMBL

BABH01006486    NWSH01000099    PCG79581.1    ODYU01004392    SOQ44224.1    KQ459193    + More
KPJ03127.1    RSAL01000006    RVE54268.1    GAIX01004999    JAA87561.1    PCG79582.1    GAMC01014405    GAMC01014402    JAB92153.1    GBXI01015550    JAC98741.1    GFDL01013087    JAV21958.1    GDHF01028550    JAI23764.1    GDHF01023285    JAI29029.1    GAKP01007399    GAKP01007395    JAC51557.1    GU132453    ACZ50717.1    GFDG01002121    JAV16678.1    CH940650    EDW66965.1    JRES01001097    KNC25531.1    CH916369    EDV93653.1    DS232075    EDS34034.1    GGFK01004030    MBW37351.1    GGFJ01003881    MBW53022.1    GGFJ01003878    MBW53019.1    GAMD01001509    JAB00082.1    CH902617    EDV42327.1    ADMH02001371    ETN62745.1    GGFJ01003880    MBW53021.1    CH964272    EDW83900.1    KRF99916.1    GGFM01003380    MBW24131.1    JXUM01041709    KQ561294    KXJ79086.1    CM000364    EDX12651.1    CH480827    EDW44827.1    CH477635    EAT38003.1    AXCM01000485    CH933806    EDW15692.1    CM000070    EAL28205.1    OUUW01000007    SPP83169.1    CH954181    EDV48796.1    AE014297    AAN13716.1    CM000160    EDW96986.1    U31961    X95602    AY089543    JQ042688    AEZ67841.1    AAAB01008859    EAA07808.4    APCN01000532    GANO01001146    JAB58725.1    KA647597    AFP62226.1    PYGN01000338    PSN48230.1    CP012526    ALC45668.1    CCAG010004095    EZ422830    ADD19106.1    JXJN01002668    AXCN02001530    UFQT01000755    UFQT01000940    SSX26991.1    SSX28111.1    NEVH01016292    PNF26121.1    ATLV01016287    KE525074    KFB41205.1    KK852415    KDR24373.1    KQ971351    EFA06459.1    BT127408    AEE62370.1    GFDF01004020    JAV10064.1    KF621134    AHB33470.1    GDAI01000406    JAI17197.1    GALX01004124    JAB64342.1    KK107519    QOIP01000009    EZA49403.1    RLU19095.1    GEDC01013973    JAS23325.1    AJWK01035082    AJWK01035083    AJWK01035084    AJWK01035085    AJWK01035086    GL762454    EFZ21433.1    GL888425    EGI61078.1    LBMM01004803    KMQ92073.1    KQ414648    KOC66154.1    KQ982769    KYQ50915.1    APGK01025209    KB740577    KB631756    ENN80183.1    ERL85819.1    KQ976401    KYM92634.1    GL449036    EFN83412.1    ADTU01026823    KQ981082    KYN09611.1    GEZM01097423    JAV54214.1    GFDF01004025    JAV10059.1    GBYB01007323    JAG77090.1    KQ981335    KYN42579.1    KYN42593.1    JH432185    GL436635    EFN71709.1    KQ434869    KZC09241.1    MH365604    QBB01413.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000283053    UP000008792    UP000095300    + More
UP000037069    UP000001070    UP000002320    UP000007801    UP000000673    UP000007798    UP000069940    UP000249989    UP000000304    UP000075885    UP000001292    UP000008820    UP000075883    UP000009192    UP000001819    UP000075920    UP000069272    UP000268350    UP000192221    UP000075881    UP000008711    UP000000803    UP000002282    UP000075900    UP000076408    UP000075884    UP000075903    UP000075882    UP000076407    UP000007062    UP000075840    UP000095301    UP000245037    UP000092553    UP000075902    UP000092444    UP000091820    UP000092445    UP000092460    UP000075886    UP000075901    UP000092443    UP000078200    UP000235965    UP000030765    UP000027135    UP000007266    UP000075880    UP000053097    UP000279307    UP000092461    UP000007755    UP000036403    UP000053825    UP000075809    UP000019118    UP000030742    UP000078540    UP000008237    UP000005205    UP000078492    UP000005203    UP000078541    UP000000311    UP000076502   

PRIDE

H9IVX5    A4V303    P48605    A0A088A3C0   

Pfam

PF00118   Cpn60_TCP1        + More
PF05527   DUF758

Interpro

IPR027413   GROEL-like_equatorial_sf        + More
IPR012719   Chap_CCT_gamma       
IPR027409   GroEL-like_apical_dom_sf       
IPR002194   Chaperonin_TCP-1_CS       
IPR017998   Chaperone_TCP-1       
IPR027410   TCP-1-like_intermed_sf       
IPR002423   Cpn60/TCP-1       
IPR008477   TNFAIP8-like       
IPR038355   TNFAIP8_sf       

SUPFAM

SSF48592   SSF48592        + More
SSF54849   SSF54849       
SSF52029   SSF52029       

Gene 3D

1.10.560.10     3.30.260.10     3.50.7.10     1.20.1440.160    

CDD

cd03337  TCP1_gamma

ProteinModelPortal

H9IVX5   A0A2A4K5S4   A0A2H1VVJ7   A0A194QCD3   A0A437BUX5   S4P6K3   + More
A0A2A4K7F4   W8B4Z1   A0A0A1WIQ5   A0A1Q3F384   A0A0K8UAV7   A0A0K8UQQ5   A0A034WB81   D1MDB9   A0A1L8ED77   B4LYG9   A0A1I8PYY9   A0A0L0BZX0   B4JG86   B0WSS5   A0A2M4A9B6   A0A2M4BJ12   A0A2M4BIY0   T1DSF4   B3M2K6   W5JIM5   A0A2M4BJ89   B4NJH6   A0A2M3Z6J9   A0A182G413   B4QWG0   A0A182P508   B4IBR9   Q16U15   A0A182M7U0   B4KAH9   Q297K0   A0A182VZQ2   A0A182F7D7   A0A3B0KAP5   A0A1W4UIV4   A0A182JW08   B3NZC4   A4V303   B4PMX4   P48605   A0A182RSY6   H6WAS3   A0A182NQG8   A0A182V0W7   A0A182LBZ2   A0A182XIU3   Q7QCQ5   A0A182HTH8   U5EM51   T1PFL6   A0A2P8YVF8   A0A0M5JC34   A0A182TLD8   D3TN28   A0A1A9WLU5   A0A1A9Z9W2   A0A1B0AS37   A0A182QK37   A0A182S668   A0A336MCC4   A0A1A9YHY4   A0A1A9VPD4   A0A2J7QC12   A0A084VTB1   A0A067RMU1   D6WRF8   A0A182J815   J3JVZ0   A0A1L8DUF6   V5RDL0   A0A0K8TS67   V5GRT0   A0A026W022   A0A1B6DCI8   A0A1B0GLJ4   E9IDA8   F4WXK8   A0A0J7KP09   A0A0L7R5R3   A0A151WTF3   N6TQ76   A0A195BVI5   E2BLS8   A0A158NUY2   A0A195D9R4   A0A1Y1JY21   A0A088A3C0   A0A1L8DUE6   A0A0C9Q0G4   A0A195FRP0   T1JFU3   E2A4G2   A0A154PBM0   A0A411G6C6  

PDB

4B2T     E-value=0,     Score=1793

KEGG

101744569    K09495 T-complex protein 1 subunit gamma | (RefSeq) T-complex protein 1 subunit gamma

GO

GO:0005737   GO:0051082   GO:0006457   GO:0005524   GO:0016787   GO:0005832   GO:0042623   GO:0035149   GO:0007430   GO:0042981   GO:0009165   GO:0009156   GO:0044249   GO:0006428   GO:0000049   GO:0006508   GO:0016286  

Subcellular location

Cytoplasm  

Length:

540

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00664999999999999

Exp number, first 60 AAs:

0.00104

Total prob of N-in:

0.00050

outside

1  -  540

 

 

Pi

28.21734

Theta

26.307183

Tajima's D

0.222832

CLR

0.913848

CSRT

0.44172791360432

Interpretation

Uncertain