Gene

KWMTBOMO12652  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001411

Annotation

ubiquitin_conjugating_enzyme_E2_[Bombyx_mori]

Location

Bomo_Chr21(-):10283093-10292754      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.64

CDS

ATGCCCTCTGTCGGAAAAATAATGTCAGCTAGTGTCGACGAACTGACCTGCAGGTTCGTTGGCAAAAATGGAAAGAAATATGAAATACACGCAAACATAACTGAAACATACCCCACCACACCACCAGTCTGGTTTGCAGAAAGTGAGGATCCAATTGTGACAAATGCTGTTCAGATACTCACTAACACTCAAGGACGAGACAATCATGTAATAAACCAGGTTGGGATATTGCTGCGAGAGCTATGCAAACTACATGGAGTACCAGAACCCCCAGACTTAGATTCATTATCCTTGCCAGTACATCCAGCGCCCCCTCAACACAGAGTACCAAGTGTCACATCAAATGGTGCTGAATCTGGTACAGAGGAAGATGAGGAAATGGCAGCTGAGGAAGATGACTCTGAAGGAGAAGATGACTTGCCACTTGAGATGGTTGAAGATGCTGGCCGTAGCAACAAGGATGACATGGAAACTGAACATTTAGCGACACTAGAGCGACTGAGACAGAACCAAAGGCAGGACTATCTATCCGGCAGTGTGTCTGGCAGTCTCCAAGCCACGGACAGACTCATGAAGGAGCTCCGGGACATATACCGTTCACACTCTTTCAAGAATAATATGTATTCCATTGAATTAGTAAACGACTCACTATATGAATGGAACATCAGACTGCGCTCTGTGGATCCTGACAGTCCACTACACAACGACCTCCTCCTGCTGAAAGAAAAGGAGGGAAAAGACTCTATTCTTCTCAACATTATATTCAAGGAAACTTATCCATTCGAGCCGCCTTTTGTGCGTGTTGTTTATCCTATAATCTCAGGAGGCTATGTATTAGTCGGAGGTGCGATATGTATGGAGCTATTAACGAAGCAAGGCTGGTCATCCGCGTACACTGTGGAAGCGGTGATCATGCAGATAGCCGCCACCCTGGTGAAGGGCAAGGCTCGGATCCAGTTCAGTGCCACCAAAGTTGTTTCACAGACTCAGTACAGTCTGGCCCGTGCACAGCAGAGCTTCAAATGTCTTGTTCAGATACATGAGAAAAATGGCTGGTTCACACCTCCGAAAGAGGATGGGTAA

Protein

MPSVGKIMSASVDELTCRFVGKNGKKYEIHANITETYPTTPPVWFAESEDPIVTNAVQILTNTQGRDNHVINQVGILLRELCKLHGVPEPPDLDSLSLPVHPAPPQHRVPSVTSNGAESGTEEDEEMAAEEDDSEGEDDLPLEMVEDAGRSNKDDMETEHLATLERLRQNQRQDYLSGSVSGSLQATDRLMKELRDIYRSHSFKNNMYSIELVNDSLYEWNIRLRSVDPDSPLHNDLLLLKEKEGKDSILLNIIFKETYPFEPPFVRVVYPIISGGYVLVGGAICMELLTKQGWSSAYTVEAVIMQIAATLVKGKARIQFSATKVVSQTQYSLARAQQSFKCLVQIHEKNGWFTPPKEDG

Uniprot

H9IVY0   Q2F5U8   A0A194RES0   A0A194QDV8   A0A2A4JHJ3   A0A2H1VVV2   + More
A0A437BUX3   A0A212F3F5   S4PHH8   A0A0L0C3X2   A0A1B0CHX1   A0A034VF36   A0A1L8DT54   A0A1I8QC30   A0A1B0FJP3   A0A0A1WPA0   A0A0K8UW07   W8C956   A0A0K8V834   T1PEP0   A0A1B0EZP5   A0A2J7PRV6   A0A067R772   A0A1I8QC37   Q29JK4   B4H356   A0A1I8N2W3   A0A0K8TNL5   B4M7E1   B4JMW5   B4R3H1   B4Q176   B4I9T6   B4L5V2   B3P901   A0A1W4UPV5   Q29R09   B4MJ52   Q86M59   A0A0Q9XH92   B3MYU0   A0A2J7PRW0   A0A3B0J9W2   A0A0R3P3W1   A0A0Q9XSE9   Q17DK6   A0A0C9S332   U5EZP1   A0A087ZQK2   A0A0K8UKU7   A0A3B0J906   A0A195CBA1   A0A151IWP3   F4W9I9   A0A195F4U7   A0A151WNE2   A0A182XA00   E9IIR8   A0A026W9P1   K7IWQ0   A0A151HYQ2   A0A158NVN7   E2ABE6   E2B3Z9   A0A154P8D0   A0A1Y1NGA6   D6WAJ7   A0A182V805   A0A182HKY0   O46068   T1HZ15   A0A1B6C3T7   A0A0M4ET02   A0A069DT30   A0A023F9D6   A0A1A9URG9   R4G5V3   A0A1A9YJC8   E9H2H9   A0A1E1WN38   A0A087TD96   T1IMB4   A0A131XTT2   B7P1N9   A0A336LHC0   V5II45   A0A224XI79   A0A1B0A2T5   A0A1A9WMA1   L7M7V0   A0A224ZAU8   A0A131YSL0   A0A2A3E5W3   A0A0J7KJ06   J9JPS3   A0A2H8TM45   A0A0N0PFB8   T1K9Y2   A0A0L7R9N2   A0A2S2QIH7  

Pubmed

19121390    26354079    22118469    23622113    26108605    25348373    + More
25830018    24495485    25315136    24845553    15632085    17994087    26369729    18057021    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    23185243    17510324    21719571    21282665    24508170    30249741    20075255    21347285    20798317    28004739    18362917    19820115    26334808    25474469    21292972    25765539    25576852    28797301    26830274   

EMBL

BABH01006430    BABH01006431    BABH01006432    DQ311325    ABD36269.1    KQ460325    + More
KPJ15790.1    KQ459193    KPJ03135.1    NWSH01001367    PCG71517.1    ODYU01004750    SOQ44960.1    RSAL01000006    RVE54272.1    AGBW02010569    OWR48265.1    GAIX01003272    JAA89288.1    JRES01000940    KNC27043.1    AJWK01012823    AJWK01012824    AJWK01012825    GAKP01018552    GAKP01018550    GAKP01018548    GAKP01018546    JAC40400.1    GFDF01004441    JAV09643.1    CCAG010019814    CCAG010019815    GBXI01013443    GBXI01000407    JAD00849.1    JAD13885.1    GDHF01028159    GDHF01021563    JAI24155.1    JAI30751.1    GAMC01006931    GAMC01006930    JAB99624.1    GDHF01017396    JAI34918.1    KA646605    AFP61234.1    AJVK01007425    NEVH01021948    PNF19068.1    KK852655    KDR19277.1    CH379063    EAL32297.1    CH479205    EDW30749.1    GDAI01001892    JAI15711.1    CH940653    EDW62708.1    KRF80765.1    KRF80766.1    KRF80767.1    KRF80768.1    CH916371    EDV92058.1    CM000366    EDX16923.1    CM000162    EDX01383.1    CH480825    EDW43967.1    CH933811    EDW06561.1    CH954183    EDV45606.1    AE014298    BT024231    AAF45767.1    ABC86293.1    CH963738    EDW72141.1    AF537092    AAO85551.1    KRG07017.1    CH902632    EDV32784.1    PNF19067.1    OUUW01000003    SPP78735.1    KRT05814.1    KRT05815.1    KRT05816.1    KRG07016.1    CH477293    EAT44494.1    EAT44495.1    GBYB01015316    GBYB01015317    JAG85083.1    JAG85084.1    GANO01000426    JAB59445.1    GDHF01025015    JAI27299.1    SPP78734.1    KQ978068    KYM97393.1    KQ980849    KYN12220.1    GL888030    EGI69164.1    KQ981810    KYN35416.1    KQ982907    KYQ49399.1    GL763521    EFZ19534.1    KK107372    QOIP01000004    EZA51739.1    RLU23552.1    KQ976714    KYM76931.1    ADTU01027300    GL438237    EFN69267.1    GL445428    EFN89586.1    KQ434844    KZC08186.1    GEZM01003772    JAV96578.1    KQ971312    EEZ99453.2    APCN01000875    AL009196    CAA15712.1    ACPB03007118    GEDC01029244    JAS08054.1    CP012528    ALC49527.1    GBGD01002067    JAC86822.1    GBBI01000600    JAC18112.1    GAHY01000195    JAA77315.1    GL732586    EFX74065.1    GDQN01002788    JAT88266.1    KK114690    KFM63085.1    JH431009    GEFM01006815    JAP68981.1    ABJB010562414    ABJB010825596    ABJB010884203    ABJB010920617    ABJB010927867    ABJB011019375    DS617630    EEC00511.1    UFQS01000006    UFQT01000006    SSW97017.1    SSX17404.1    GANP01003827    JAB80641.1    GFTR01005672    JAW10754.1    GACK01004658    JAA60376.1    GFPF01013137    MAA24283.1    GEDV01007097    JAP81460.1    KZ288386    PBC26451.1    LBMM01006928    KMQ90186.1    ABLF02036524    GFXV01003419    MBW15224.1    LADI01008471    KPJ20692.1    CAEY01001893    KQ414624    KOC67539.1    GGMS01008117    MBY77320.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000283053    UP000007151    + More
UP000037069    UP000092461    UP000095300    UP000092444    UP000095301    UP000092462    UP000235965    UP000027135    UP000001819    UP000008744    UP000008792    UP000001070    UP000000304    UP000002282    UP000001292    UP000009192    UP000008711    UP000192221    UP000000803    UP000007798    UP000007801    UP000268350    UP000008820    UP000005203    UP000078542    UP000078492    UP000007755    UP000078541    UP000075809    UP000076407    UP000053097    UP000279307    UP000002358    UP000078540    UP000005205    UP000000311    UP000008237    UP000076502    UP000007266    UP000075903    UP000075840    UP000015103    UP000092553    UP000078200    UP000092443    UP000000305    UP000054359    UP000001555    UP000092445    UP000091820    UP000242457    UP000036403    UP000007819    UP000015104    UP000053825   

PRIDE

H9IVY0    Q2F5U8    Q29R09    Q86M59    O46068   

Pfam

PF00179   UQ_con

Interpro

IPR016135   UBQ-conjugating_enzyme/RWD        + More
IPR000608   UBQ-conjugat_E2       

SUPFAM

SSF54495   SSF54495       

Gene 3D

3.10.110.10    

CDD

cd00195  UBCc

ProteinModelPortal

H9IVY0   Q2F5U8   A0A194RES0   A0A194QDV8   A0A2A4JHJ3   A0A2H1VVV2   + More
A0A437BUX3   A0A212F3F5   S4PHH8   A0A0L0C3X2   A0A1B0CHX1   A0A034VF36   A0A1L8DT54   A0A1I8QC30   A0A1B0FJP3   A0A0A1WPA0   A0A0K8UW07   W8C956   A0A0K8V834   T1PEP0   A0A1B0EZP5   A0A2J7PRV6   A0A067R772   A0A1I8QC37   Q29JK4   B4H356   A0A1I8N2W3   A0A0K8TNL5   B4M7E1   B4JMW5   B4R3H1   B4Q176   B4I9T6   B4L5V2   B3P901   A0A1W4UPV5   Q29R09   B4MJ52   Q86M59   A0A0Q9XH92   B3MYU0   A0A2J7PRW0   A0A3B0J9W2   A0A0R3P3W1   A0A0Q9XSE9   Q17DK6   A0A0C9S332   U5EZP1   A0A087ZQK2   A0A0K8UKU7   A0A3B0J906   A0A195CBA1   A0A151IWP3   F4W9I9   A0A195F4U7   A0A151WNE2   A0A182XA00   E9IIR8   A0A026W9P1   K7IWQ0   A0A151HYQ2   A0A158NVN7   E2ABE6   E2B3Z9   A0A154P8D0   A0A1Y1NGA6   D6WAJ7   A0A182V805   A0A182HKY0   O46068   T1HZ15   A0A1B6C3T7   A0A0M4ET02   A0A069DT30   A0A023F9D6   A0A1A9URG9   R4G5V3   A0A1A9YJC8   E9H2H9   A0A1E1WN38   A0A087TD96   T1IMB4   A0A131XTT2   B7P1N9   A0A336LHC0   V5II45   A0A224XI79   A0A1B0A2T5   A0A1A9WMA1   L7M7V0   A0A224ZAU8   A0A131YSL0   A0A2A3E5W3   A0A0J7KJ06   J9JPS3   A0A2H8TM45   A0A0N0PFB8   T1K9Y2   A0A0L7R9N2   A0A2S2QIH7  

PDB

2QGX     E-value=7.87946e-70,     Score=670

KEGG

692915    K10582 ubiquitin-conjugating enzyme E2 Q [EC:2.3.2.23] | (RefSeq) ubiquitin conjugating enzyme E2

PATHWAY

04120    Ubiquitin mediated proteolysis - Bombyx mori (domestic silkworm)

GO

GO:0004842   GO:0070936   GO:0061631   GO:0016021   GO:0016874  

Length:

360

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

8.39304

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02909

outside

1  -  360

 

 

Pi

204.190596

Theta

176.496918

Tajima's D

0.730039

CLR

0.000015

CSRT

0.584170791460427

Interpretation

Uncertain