Gene

KWMTBOMO12650  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001570

Annotation

phosphoribosyl_pyrophosphate_synthetase_[Bombyx_mori]

Location

Bomo_Chr21(+):10272295-10273447      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.243

CDS

ATGCCGAACATAAAAGTGTTTACTGGAAGCTCTCATCCAGACATCGCGAAAACTATCGTCGCAAGGCTAGGTCTAAACTTGGGCAGGGCCACCACTAAGAAGTTCAGTAACAAAGAAACCAACGTTGAAATCGGCGAATCCGTTAGAGGTGAGGATGTCTACATTGTTCAAAGCGGCTGTGGGGAAATAAACGATAACTTGATGGAACTTTTCATAATGATAAACGCGTGCAAAATTGCATCAGCATCGAGAGTAACGGCGGTTGTGCCCTGCTTCCCGTACTCGAGACAGGACAAGAAAGAGAAAAGCCGGGCGCCGATTACGGCCAAGCTACTTGCTAATCTGATTTCTGTAGCCGGAGCTGATCACGTCATCACAATTGACCTACACGCGTCACAGATCCAGGGCTTCTTCAATATTCCCGTCGACAATCTTTATGCTGAACCAGCTATTACCAAGTGGATCAAAGAAAATATCCCAGAATGGAAAAGCAGCGTCATGGTGTCTCCAGACGCAGGCGGGGTGAAGAGGATGACCGGAATCGCTGATCGTCTTGATATCGATTTCGCCATTATCCACAAAGAAAGGCAAAGGGCTAACGAAGGAGATTCTACGGTTCTTGTTGGGGATGTGAAGAATAAAACTGCAATCATGGTTGACGATTTAGCTGATACATGTGACACAATACTCAAAGGTGCTGAAGCGCTCCGCGAAGCCGGCGCCAATAAGATTTACGCGTTCTTAACCCACGGAATATTTGCCGGGAACGCTATCGAAAAAATTAACAATTCGTCCTTGGAAGCAATCGTGGTGACAAACACCATACCGCAAGAAAAAAATATGAAATTGTGTCCGAAGTTACAAACAATAGACATTTCTGTGATGCTCGCGGAAGCCATAAGGCGTACTCATTATGCCGAATCCGTGTCGTATCTTTTTACTAACGTGCCATATTAA

Protein

MPNIKVFTGSSHPDIAKTIVARLGLNLGRATTKKFSNKETNVEIGESVRGEDVYIVQSGCGEINDNLMELFIMINACKIASASRVTAVVPCFPYSRQDKKEKSRAPITAKLLANLISVAGADHVITIDLHASQIQGFFNIPVDNLYAEPAITKWIKENIPEWKSSVMVSPDAGGVKRMTGIADRLDIDFAIIHKERQRANEGDSTVLVGDVKNKTAIMVDDLADTCDTILKGAEALREAGANKIYAFLTHGIFAGNAIEKINNSSLEAIVVTNTIPQEKNMKLCPKLQTIDISVMLAEAIRRTHYAESVSYLFTNVPY

Uniprot

H9IWD9   Q1HPL4   A0A2H1VVX6   A0A2A4J198   A0A212F3H0   A0A194QCE4   + More
A0A0L7LF97   I4DPB4   A0A194RE93   H9IVV5   A0A2A4JUX7   Q2F5M9   A0A2H1W2N3   A0A212ERK4   A0A0L7K4M4   A0A0N0PEY1   A0A194QC00   S4PL21   A0A3B0JX81   A0A0M4EYQ0   A0A1I8P4F3   A0A1W4UKL4   A0A1Y1NFA1   A0A1L8E345   A0A0J9RSH8   A0A0Q9XK55   A0A0R3P8W1   A0A0R1DZV7   A0A0P8ZTR9   A0A0Q5UIJ1   A0A1L8E9U5   Q9VT32   Q0IFT8   A0A1L8E2H0   A0A0J9RSB7   A0A3B0JPB4   A0A0R1DZQ8   A0A0Q9WPJ2   A0A0C9R8X5   A0A0L0CDS4   A0A0Q5U6A4   A0A023EQH6   A0A1Y3BGJ3   A0A0K8W0G1   A0A1B6G9D4   A0A0P5KCA7   A0A0A1XAH4   A0A1B6D970   W8CDN9   A0A034WPY7   A0A2J7PHH9   A0A1B6MVD9   A0A1B6HZC8   A0A3P8W8L4   A0A3B5AVX1   A0A0P7V0D5   A0A3Q1CZG6   A0A3P8T9R1   A0A0K8TU93   E9G5F1   A0A411G6I3   A0A3Q4AMU3   A0A3B4X4V2   A0A3B4TTY8   A0A3Q3QF57   T1PAZ6   A0A1B0FPW5   A0A1I8MLU4   U5EZ78   A0A226MPB5   A0A3L8S882   A0A218ULN7   A0A3M0JTT0   A0A226PJM8   A0A1V4KYE1   F1NIP5   U3K9R5   H0Z7Y7   A0A3Q2QUU4   A0A3Q2GQF0   A0A2L2Y4E3   A0A3B1KAP9   A0A3B4DF22   A0A444UD22   A0A3Q2XE55   A0A3B5LKN0   A0A3Q2V0L9   A0A3Q4HBA7   W5UIZ0   A0A1W5A528   A0A3Q1HP75   A0A1W4YN06   A0A3B4ESP7   A0A3Q3A0Q8   A0A3P8NT33   A0A3P9BZR7   A0A1S4EAD2   A0A091EX05   A0A0P4ZSM1   Q08CA5  

Pubmed

19121390    22118469    26354079    26227816    22651552    23622113    + More
28004739    22936249    17994087    15632085    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17510324    26108605    24945155    26483478    25830018    24495485    25348373    24487278    26369729    21292972    25315136    30282656    24621616    15592404    20360741    26561354    25329095    25186727    23127152    23594743   

EMBL

BABH01006428    DQ443388    ABF51477.1    ODYU01004750    SOQ44958.1    NWSH01003851    + More
PCG65761.1    AGBW02010569    OWR48263.1    KQ459193    KPJ03137.1    JTDY01001360    KOB74080.1    AK403508    BAM19754.1    KQ460325    KPJ15789.1    BABH01006661    NWSH01000587    PCG75488.1    DQ311394    ABD36338.1    ODYU01005874    SOQ47206.1    AGBW02013021    OWR44084.1    JTDY01010841    KOB57961.1    KQ459762    KPJ20127.1    KPJ03078.1    GAIX01004255    JAA88305.1    OUUW01000002    SPP77331.1    CP012525    ALC43675.1    GEZM01003767    JAV96582.1    GFDF01001169    JAV12915.1    CM002912    KMY98728.1    CH933809    KRG06202.1    CH379070    KRT09055.1    CM000159    KRK00850.1    CH902618    KPU77914.1    CH954178    KQS43722.1    GFDG01003292    JAV15507.1    AE014296    AY071526    AAF50223.2    AAL49148.1    CH477294    EAT44443.1    GFDF01001210    JAV12874.1    KMY98726.1    SPP77330.1    KRK00849.1    CH963847    KRF97767.1    GBYB01004625    JAG74392.1    JRES01000534    KNC30386.1    KQS43724.1    JXUM01051082    JXUM01051083    JXUM01051084    JXUM01054183    JXUM01054184    GAPW01002263    KQ561809    KQ561674    JAC11335.1    KXJ77466.1    KXJ77836.1    MUJZ01024544    OTF79164.1    GDHF01007661    JAI44653.1    GECZ01010727    JAS59042.1    GDIQ01186318    JAK65407.1    GBXI01006376    JAD07916.1    GEDC01015075    JAS22223.1    GAMC01001616    JAC04940.1    GAKP01002712    JAC56240.1    NEVH01025136    PNF15791.1    GEBQ01000106    JAT39871.1    GECU01027694    JAS80012.1    JARO02006097    KPP65739.1    GDAI01000088    JAI17515.1    GL732532    EFX85197.1    MH365679    QBB01488.1    KA645869    AFP60498.1    CCAG010001377    CCAG010001378    CCAG010001379    GANO01001284    JAB58587.1    MCFN01000568    OXB57176.1    QUSF01000041    RLV98398.1    MUZQ01000241    OWK54330.1    QRBI01000153    RMB98306.1    AWGT02000066    OXB79639.1    LSYS01001150    OPJ89425.1    AADN05000020    AGTO01010937    ABQF01012401    ABQF01012402    ABQF01012403    IAAA01001442    IAAA01001443    IAAA01001444    LAA01995.1    SCEB01214806    SCEB01214432    RXM33083.1    RXM35382.1    JT411878    AHH39642.1    KK719050    KFO61077.1    GDIP01208594    JAJ14808.1    AL935304    BX957302    BC124318    BC153527    BC164343    AAI24319.1    AAI64343.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000037510    UP000053240    + More
UP000268350    UP000092553    UP000095300    UP000192221    UP000009192    UP000001819    UP000002282    UP000007801    UP000008711    UP000000803    UP000008820    UP000007798    UP000037069    UP000069940    UP000249989    UP000235965    UP000265120    UP000261400    UP000034805    UP000257160    UP000265080    UP000000305    UP000261620    UP000261360    UP000261420    UP000261600    UP000092444    UP000095301    UP000198323    UP000276834    UP000197619    UP000269221    UP000198419    UP000190648    UP000000539    UP000016665    UP000007754    UP000265000    UP000265020    UP000018467    UP000261440    UP000264820    UP000261380    UP000264840    UP000261580    UP000221080    UP000192224    UP000265040    UP000261460    UP000264800    UP000265100    UP000265160    UP000079169    UP000052976    UP000000437   

PRIDE

H9IWD9    Q1HPL4    H9IVV5    Q2F5M9    Q9VT32   

Pfam

PF14572   Pribosyl_synth        + More
PF13793   Pribosyltran_N
PF00043   GST_C
PF13417   GST_N_3

Interpro

IPR000836   PRibTrfase_dom        + More
IPR029057   PRTase-like       
IPR005946   Rib-P_diPkinase       
IPR000842   PRib_PP_synth_CS       
IPR029099   Pribosyltran_N       
IPR036249   Thioredoxin-like_sf       
IPR036282   Glutathione-S-Trfase_C_sf       
IPR004046   GST_C       
IPR004045   Glutathione_S-Trfase_N       
IPR010987   Glutathione-S-Trfase_C-like       
IPR037515   Rib-P_diPkinase_bac       

SUPFAM

SSF53271   SSF53271        + More
SSF47616   SSF47616       
SSF52833   SSF52833       

CDD

cd06223  PRTases_typeI

ProteinModelPortal

H9IWD9   Q1HPL4   A0A2H1VVX6   A0A2A4J198   A0A212F3H0   A0A194QCE4   + More
A0A0L7LF97   I4DPB4   A0A194RE93   H9IVV5   A0A2A4JUX7   Q2F5M9   A0A2H1W2N3   A0A212ERK4   A0A0L7K4M4   A0A0N0PEY1   A0A194QC00   S4PL21   A0A3B0JX81   A0A0M4EYQ0   A0A1I8P4F3   A0A1W4UKL4   A0A1Y1NFA1   A0A1L8E345   A0A0J9RSH8   A0A0Q9XK55   A0A0R3P8W1   A0A0R1DZV7   A0A0P8ZTR9   A0A0Q5UIJ1   A0A1L8E9U5   Q9VT32   Q0IFT8   A0A1L8E2H0   A0A0J9RSB7   A0A3B0JPB4   A0A0R1DZQ8   A0A0Q9WPJ2   A0A0C9R8X5   A0A0L0CDS4   A0A0Q5U6A4   A0A023EQH6   A0A1Y3BGJ3   A0A0K8W0G1   A0A1B6G9D4   A0A0P5KCA7   A0A0A1XAH4   A0A1B6D970   W8CDN9   A0A034WPY7   A0A2J7PHH9   A0A1B6MVD9   A0A1B6HZC8   A0A3P8W8L4   A0A3B5AVX1   A0A0P7V0D5   A0A3Q1CZG6   A0A3P8T9R1   A0A0K8TU93   E9G5F1   A0A411G6I3   A0A3Q4AMU3   A0A3B4X4V2   A0A3B4TTY8   A0A3Q3QF57   T1PAZ6   A0A1B0FPW5   A0A1I8MLU4   U5EZ78   A0A226MPB5   A0A3L8S882   A0A218ULN7   A0A3M0JTT0   A0A226PJM8   A0A1V4KYE1   F1NIP5   U3K9R5   H0Z7Y7   A0A3Q2QUU4   A0A3Q2GQF0   A0A2L2Y4E3   A0A3B1KAP9   A0A3B4DF22   A0A444UD22   A0A3Q2XE55   A0A3B5LKN0   A0A3Q2V0L9   A0A3Q4HBA7   W5UIZ0   A0A1W5A528   A0A3Q1HP75   A0A1W4YN06   A0A3B4ESP7   A0A3Q3A0Q8   A0A3P8NT33   A0A3P9BZR7   A0A1S4EAD2   A0A091EX05   A0A0P4ZSM1   Q08CA5  

PDB

3S5J     E-value=7.8184e-139,     Score=1264

KEGG

733021    K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] | (RefSeq) phosphoribosyl pyrophosphate synth

PATHWAY

00030    Pentose phosphate pathway - Bombyx mori (domestic silkworm)
00230    Purine metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01200    Carbon metabolism - Bombyx mori (domestic silkworm)
01230    Biosynthesis of amino acids - Bombyx mori (domestic silkworm)

GO

GO:0009116   GO:0009156   GO:0000287   GO:0009165   GO:0004749   GO:0016301   GO:0016021   GO:0002189   GO:0005524   GO:0006164   GO:0006015   GO:0005737   GO:0044249   GO:0006428   GO:0000049   GO:0006508   GO:0016286  

PANTHER

PTHR10210  

Length:

318

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.07823

Exp number, first 60 AAs:

0.00057

Total prob of N-in:

0.01561

outside

1  -  318

 

 

Pi

10.795626

Theta

10.480182

Tajima's D

-0.497715

CLR

0.543217

CSRT

0.242037898105095

Interpretation

Uncertain