SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12650  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001570
Annotation
phosphoribosyl_pyrophosphate_synthetase_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 2.243
 

Sequence

CDS
ATGCCGAACATAAAAGTGTTTACTGGAAGCTCTCATCCAGACATCGCGAAAACTATCGTCGCAAGGCTAGGTCTAAACTTGGGCAGGGCCACCACTAAGAAGTTCAGTAACAAAGAAACCAACGTTGAAATCGGCGAATCCGTTAGAGGTGAGGATGTCTACATTGTTCAAAGCGGCTGTGGGGAAATAAACGATAACTTGATGGAACTTTTCATAATGATAAACGCGTGCAAAATTGCATCAGCATCGAGAGTAACGGCGGTTGTGCCCTGCTTCCCGTACTCGAGACAGGACAAGAAAGAGAAAAGCCGGGCGCCGATTACGGCCAAGCTACTTGCTAATCTGATTTCTGTAGCCGGAGCTGATCACGTCATCACAATTGACCTACACGCGTCACAGATCCAGGGCTTCTTCAATATTCCCGTCGACAATCTTTATGCTGAACCAGCTATTACCAAGTGGATCAAAGAAAATATCCCAGAATGGAAAAGCAGCGTCATGGTGTCTCCAGACGCAGGCGGGGTGAAGAGGATGACCGGAATCGCTGATCGTCTTGATATCGATTTCGCCATTATCCACAAAGAAAGGCAAAGGGCTAACGAAGGAGATTCTACGGTTCTTGTTGGGGATGTGAAGAATAAAACTGCAATCATGGTTGACGATTTAGCTGATACATGTGACACAATACTCAAAGGTGCTGAAGCGCTCCGCGAAGCCGGCGCCAATAAGATTTACGCGTTCTTAACCCACGGAATATTTGCCGGGAACGCTATCGAAAAAATTAACAATTCGTCCTTGGAAGCAATCGTGGTGACAAACACCATACCGCAAGAAAAAAATATGAAATTGTGTCCGAAGTTACAAACAATAGACATTTCTGTGATGCTCGCGGAAGCCATAAGGCGTACTCATTATGCCGAATCCGTGTCGTATCTTTTTACTAACGTGCCATATTAA
Protein
MPNIKVFTGSSHPDIAKTIVARLGLNLGRATTKKFSNKETNVEIGESVRGEDVYIVQSGCGEINDNLMELFIMINACKIASASRVTAVVPCFPYSRQDKKEKSRAPITAKLLANLISVAGADHVITIDLHASQIQGFFNIPVDNLYAEPAITKWIKENIPEWKSSVMVSPDAGGVKRMTGIADRLDIDFAIIHKERQRANEGDSTVLVGDVKNKTAIMVDDLADTCDTILKGAEALREAGANKIYAFLTHGIFAGNAIEKINNSSLEAIVVTNTIPQEKNMKLCPKLQTIDISVMLAEAIRRTHYAESVSYLFTNVPY

Summary

EMBL
BABH01006428    DQ443388    ABF51477.1    ODYU01004750    SOQ44958.1    NWSH01003851    + More
PCG65761.1    AGBW02010569    OWR48263.1    KQ459193    KPJ03137.1    JTDY01001360    KOB74080.1    AK403508    BAM19754.1    KQ460325    KPJ15789.1    BABH01006661    NWSH01000587    PCG75488.1    DQ311394    ABD36338.1    ODYU01005874    SOQ47206.1    AGBW02013021    OWR44084.1    JTDY01010841    KOB57961.1    KQ459762    KPJ20127.1    KPJ03078.1    GAIX01004255    JAA88305.1    OUUW01000002    SPP77331.1    CP012525    ALC43675.1    GEZM01003767    JAV96582.1    GFDF01001169    JAV12915.1    CM002912    KMY98728.1    CH933809    KRG06202.1    CH379070    KRT09055.1    CM000159    KRK00850.1    CH902618    KPU77914.1    CH954178    KQS43722.1    GFDG01003292    JAV15507.1    AE014296    AY071526    AAF50223.2    AAL49148.1    CH477294    EAT44443.1    GFDF01001210    JAV12874.1    KMY98726.1    SPP77330.1    KRK00849.1    CH963847    KRF97767.1    GBYB01004625    JAG74392.1    JRES01000534    KNC30386.1    KQS43724.1    JXUM01051082    JXUM01051083    JXUM01051084    JXUM01054183    JXUM01054184    GAPW01002263    KQ561809    KQ561674    JAC11335.1    KXJ77466.1    KXJ77836.1    MUJZ01024544    OTF79164.1    GDHF01007661    JAI44653.1    GECZ01010727    JAS59042.1    GDIQ01186318    JAK65407.1    GBXI01006376    JAD07916.1    GEDC01015075    JAS22223.1    GAMC01001616    JAC04940.1    GAKP01002712    JAC56240.1    NEVH01025136    PNF15791.1    GEBQ01000106    JAT39871.1    GECU01027694    JAS80012.1    JARO02006097    KPP65739.1    GDAI01000088    JAI17515.1    GL732532    EFX85197.1    MH365679    QBB01488.1    KA645869    AFP60498.1    CCAG010001377    CCAG010001378    CCAG010001379    GANO01001284    JAB58587.1    MCFN01000568    OXB57176.1    QUSF01000041    RLV98398.1    MUZQ01000241    OWK54330.1    QRBI01000153    RMB98306.1    AWGT02000066    OXB79639.1    LSYS01001150    OPJ89425.1    AADN05000020    AGTO01010937    ABQF01012401    ABQF01012402    ABQF01012403    IAAA01001442    IAAA01001443    IAAA01001444    LAA01995.1    SCEB01214806    SCEB01214432    RXM33083.1    RXM35382.1    JT411878    AHH39642.1    KK719050    KFO61077.1    GDIP01208594    JAJ14808.1    AL935304    BX957302    BC124318    BC153527    BC164343    AAI24319.1    AAI64343.1   
Pfam
PF14572   Pribosyl_synth        + More
PF13793   Pribosyltran_N
PF00043   GST_C
PF13417   GST_N_3
Interpro
IPR000836   PRibTrfase_dom        + More
IPR029057   PRTase-like       
IPR005946   Rib-P_diPkinase       
IPR000842   PRib_PP_synth_CS       
IPR029099   Pribosyltran_N       
IPR036249   Thioredoxin-like_sf       
IPR036282   Glutathione-S-Trfase_C_sf       
IPR004046   GST_C       
IPR004045   Glutathione_S-Trfase_N       
IPR010987   Glutathione-S-Trfase_C-like       
IPR037515   Rib-P_diPkinase_bac       
SUPFAM
SSF53271   SSF53271        + More
SSF47616   SSF47616       
SSF52833   SSF52833       
PDB
3S5J     E-value=7.8184e-139,     Score=1264

Ontologies

Topology

Length:
318
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.07823
Exp number, first 60 AAs:
0.00057
Total prob of N-in:
0.01561
outside
1  -  318
 
 

Population Genetic Test Statistics

Pi
10.795626
Theta
10.480182
Tajima's D
-0.497715
CLR
0.543217
CSRT
0.242037898105095
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
26280517 FSIYGR 100.00 0.002
26280517 SSTEETSQIK 100.00 0.010
25044914 SSVMVSPDAGGVK 100.00 0.010
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