Gene

KWMTBOMO12645

Pre Gene Modal

BGIBMGA001567

Annotation

PREDICTED:_actin-binding_Rho-activating_protein-like_[Bombyx_mori]

Location

Bomo_Chr21(+):10149218-10189187      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.431

CDS

ATGAGCGGCAATTTCCTAACGATACCCGGAGATGATGCTATTCAGAGACGATCAAGGAGCTCGTCGCTTACGGACTTGATATCCGCCTTCGACACAAAAGCACAGGCTCACACCGAGCTTCAGAAAGTAACAGCCTTCAGCGGACAATTCGACAAGAACCACAAGCCTACATTCTCAAAAGACGAATATGGAAAACCTATACCGGGTTCGATGACCGAATACAGAGGCGCAGAAGCACAAGCCAGAGTATGTACAGAAATGAAGGAGCTTTGTGAAATCATCAACGAATACGGAAAGACCCCATGCAAGAGTTTATTACCGCCTGAATTACAAGACGCCACCAAAGTTATATCATTTGGAGAATTATTTACTATATACACGGTGATATCGGACAAACTGGTTGGGATACTTCTGAGAACGCGGAAACATCAGCTAACGTTCTTCGAAGGAGAAGTATTGTTTCAGAAACGTGACGATGATGTTCCGGTTTTCCTGATGCAACCCATCGACGATATAAGAACGTATTGCAACAACAAAGCGCTTCAGGCCAGAAGATCGGTGTCGCCTATGCCCAATTAA

Protein

MSGNFLTIPGDDAIQRRSRSSSLTDLISAFDTKAQAHTELQKVTAFSGQFDKNHKPTFSKDEYGKPIPGSMTEYRGAEAQARVCTEMKELCEIINEYGKTPCKSLLPPELQDATKVISFGELFTIYTVISDKLVGILLRTRKHQLTFFEGEVLFQKRDDDVPVFLMQPIDDIRTYCNNKALQARRSVSPMPN

Uniprot

A0A194QCJ3   A0A212EI14   A0A1E1WUI5   A0A437BUY2   A0A194RDW0   A0A0T6B3Q5   + More
A0A1Y1KE37   T1PG31   B0XHU2   A0A3B0K092   A0A1B0ALU1   A0A1I8NFN8   B4I9Q5   A0A1A9X7Z0   O46052   B4L6S8   B3P8X2   A0A1A9UU79   B3MR31   B4Q1A2   A0A0M4EXD9   B4GXS2   A0A1I8Q0U3   A0A1Q3FYL1   Q29HF9   A0A1A9W290   B4NC46   A0A1B0FDR1   A0A1W4VEH6   A0A1B0AJZ2   B4M7R9   A0A0C9QJS9   A0A0Q5ST70   B4R3F0   M9PDL0   A0A0P9A9P4   A0A0R3P078   A0A1I8Q0X6   A0A0L0BZY5   A0A0R1E9T0   A0A1W7R4S8   A0A023EME2   A0A0Q9WU36   A0A1W4VR78   B4JMM8   D6WN35   W8C290   W8BFX2   A0A034VT38   A0A182WS82   Q380I4   A0A034VNU8   A0A182FRI3   A0A0C9RYU8   T1E9U9   A0A182IQA8   A0A0K8UV05   A0A310SHC3   A0A154PLS5   A0A2A3ECJ6   A0A088AD70   A0A0A1XT20   K7J3V2   A0A182UUL4   U5EPQ8   A0A182JSQ3   A0A0L7R9Y3   A0A158NSV7   A0A182QGV7   A0A195CST8   A0A182YAI1   J3JVY7   A0A182R4Y5   A0A182MIF5   F5HMN1   A0A182VWF8   A0A182PGX7   A0A151WYT1   A0A195DPW0   A0A182L9F1   A0A1B6CIQ5   A0A182UD78   A0A182HL31   A0A151I0J9   A0A087TGV2   A0A3L8DUE4   A0A0N0U679   A0A1J1HRN5   A0A182NQD6   V5GHL5   E2AFT8   F4WZ62   A0A2S2QX27   A0A1B6GIJ3   A0A026X1Y5   A0A0A9WQF7   A0A195EXP1   A0A1J1HQ05  

Pubmed

26354079    22118469    28004739    25315136    17994087    10731132    + More
12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    15632085    26108605    24945155    18362917    19820115    24495485    25348373    12364791    14747013    17210077    25830018    20075255    21347285    25244985    22516182    23537049    20966253    30249741    20798317    21719571    24508170    25401762    26823975   

EMBL

KQ459193    KPJ03139.1    AGBW02014739    OWR41117.1    GDQN01001199    GDQN01000345    + More
JAT89855.1    JAT90709.1    RSAL01000006    RVE54278.1    KQ460325    KPJ15787.1    LJIG01016140    KRT81495.1    GEZM01086144    JAV59742.1    KA647100    AFP61729.1    DS233206    EDS28665.1    OUUW01000003    SPP78421.1    JXJN01000141    CH480825    EDW43936.1    AE014298    AY060993    AL009194    AAF45738.3    AAL28541.1    AGB95023.1    CAA15697.1    CH933812    EDW06074.2    CH954183    EDV45577.2    CH902622    EDV34236.1    CM000162    EDX01409.1    CP012528    ALC48380.1    CH479196    EDW27549.1    GFDL01002412    JAV32633.1    CH379064    EAL31799.2    CH964239    EDW82405.2    CCAG010016762    CH940653    EDW62836.1    GBYB01000852    JAG70619.1    KQS26031.1    CM000366    EDX16902.1    AGB95022.1    KPU75038.1    KRT06572.1    JRES01001093    KNC25627.1    KRK06140.1    GEHC01001491    JAV46154.1    GAPW01004114    JAC09484.1    KRF99611.1    CH916371    EDV91971.1    KQ971343    EFA04345.1    GAMC01010706    JAB95849.1    GAMC01010707    JAB95848.1    GAKP01013952    JAC45000.1    AAAB01008987    EAL38580.4    GAKP01013951    JAC45001.1    GBYB01014515    JAG84282.1    GAMD01000982    JAB00609.1    GDHF01021903    JAI30411.1    KQ759903    OAD62000.1    KQ434943    KZC12238.1    KZ288285    PBC29503.1    GBXI01000096    JAD14196.1    GANO01004588    JAB55283.1    KQ414620    KOC67682.1    ADTU01025214    AXCN02001526    KQ977305    KYN03768.1    APGK01051402    BT127405    KB741190    KB632094    AEE62367.1    ENN73012.1    ERL88707.1    AXCM01000785    EGK97553.1    KQ982649    KYQ52946.1    KQ980653    KYN14847.1    GEDC01023942    JAS13356.1    APCN01000879    KQ976619    KYM79140.1    KK115167    KFM64341.1    QOIP01000004    RLU23912.1    KQ435755    KOX76051.1    CVRI01000015    CRK90052.1    GALX01007344    JAB61122.1    GL439158    EFN67687.1    GL888470    EGI60513.1    GGMS01013010    MBY82213.1    GECZ01007646    GECZ01004379    GECZ01000947    JAS62123.1    JAS65390.1    JAS68822.1    KK107054    EZA61404.1    GBHO01036529    GBRD01014397    GDHC01010840    JAG07075.1    JAG51429.1    JAQ07789.1    KQ981923    KYN32916.1    CRK90051.1   

Proteomes

UP000053268    UP000007151    UP000283053    UP000053240    UP000095301    UP000002320    + More
UP000268350    UP000092460    UP000001292    UP000092443    UP000000803    UP000009192    UP000008711    UP000078200    UP000007801    UP000002282    UP000092553    UP000008744    UP000095300    UP000001819    UP000091820    UP000007798    UP000092444    UP000192221    UP000092445    UP000008792    UP000000304    UP000037069    UP000001070    UP000007266    UP000076407    UP000007062    UP000069272    UP000075880    UP000076502    UP000242457    UP000005203    UP000002358    UP000075903    UP000075881    UP000053825    UP000005205    UP000075886    UP000078542    UP000076408    UP000019118    UP000030742    UP000075900    UP000075883    UP000075920    UP000075885    UP000075809    UP000078492    UP000075882    UP000075902    UP000075840    UP000078540    UP000054359    UP000279307    UP000053105    UP000183832    UP000075884    UP000000311    UP000007755    UP000053097    UP000078541   

PRIDE

O46052    M9PDL0   

Pfam

PF14705   Costars

Interpro

IPR038095   Costars_sf        + More
IPR027817   Costars_dom       

Gene 3D

1.10.10.1540    

ProteinModelPortal

A0A194QCJ3   A0A212EI14   A0A1E1WUI5   A0A437BUY2   A0A194RDW0   A0A0T6B3Q5   + More
A0A1Y1KE37   T1PG31   B0XHU2   A0A3B0K092   A0A1B0ALU1   A0A1I8NFN8   B4I9Q5   A0A1A9X7Z0   O46052   B4L6S8   B3P8X2   A0A1A9UU79   B3MR31   B4Q1A2   A0A0M4EXD9   B4GXS2   A0A1I8Q0U3   A0A1Q3FYL1   Q29HF9   A0A1A9W290   B4NC46   A0A1B0FDR1   A0A1W4VEH6   A0A1B0AJZ2   B4M7R9   A0A0C9QJS9   A0A0Q5ST70   B4R3F0   M9PDL0   A0A0P9A9P4   A0A0R3P078   A0A1I8Q0X6   A0A0L0BZY5   A0A0R1E9T0   A0A1W7R4S8   A0A023EME2   A0A0Q9WU36   A0A1W4VR78   B4JMM8   D6WN35   W8C290   W8BFX2   A0A034VT38   A0A182WS82   Q380I4   A0A034VNU8   A0A182FRI3   A0A0C9RYU8   T1E9U9   A0A182IQA8   A0A0K8UV05   A0A310SHC3   A0A154PLS5   A0A2A3ECJ6   A0A088AD70   A0A0A1XT20   K7J3V2   A0A182UUL4   U5EPQ8   A0A182JSQ3   A0A0L7R9Y3   A0A158NSV7   A0A182QGV7   A0A195CST8   A0A182YAI1   J3JVY7   A0A182R4Y5   A0A182MIF5   F5HMN1   A0A182VWF8   A0A182PGX7   A0A151WYT1   A0A195DPW0   A0A182L9F1   A0A1B6CIQ5   A0A182UD78   A0A182HL31   A0A151I0J9   A0A087TGV2   A0A3L8DUE4   A0A0N0U679   A0A1J1HRN5   A0A182NQD6   V5GHL5   E2AFT8   F4WZ62   A0A2S2QX27   A0A1B6GIJ3   A0A026X1Y5   A0A0A9WQF7   A0A195EXP1   A0A1J1HQ05  

PDB

2KRH     E-value=1.14523e-12,     Score=173

KEGG

101743846    no KO assigned | (RefSeq) actin-binding Rho-activating protein-like

GO

GO:0015629   GO:0035025   GO:0003779   GO:0045893   GO:0030017   GO:0051091   GO:0045944  

Length:

192

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.69883

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01777

outside

1  -  192

 

 

Pi

247.459731

Theta

180.7691

Tajima's D

0.965984

CLR

0.388173

CSRT

0.648717564121794

Interpretation

Uncertain