Gene

KWMTBOMO12633

Annotation

PREDICTED:_protein_kish-A_[Dipodomys_ordii]

Location

Bomo_Chr21(-):9745919-9747003      View in EpiBrowser

Full name

Protein kish       + More
Protein kish-A      

Alternative Name

Transmembrane protein 167
Transmembrane protein 167A

Location in the cell

PlasmaMembrane   Reliability : 3.545

CDS

ATGAGTGCTATATTTAATTTTCAAAGCCTTTTATCCGTATTACTATTGTTGATATGCACCTGCGCTTATCTAAGATCATTTTTTCCAAGTATCATGGACCGGAATAAAACTGGTTTACTGGGAACATTTTGGAAATGTGCAAGAATTGGTGAACGCAAATCCCCCTATGTTGCAGTCTGTTGTATATTAATGGCCTTTTCAATATTGTTCCTCACATAA

Protein

MSAIFNFQSLLSVLLLLICTCAYLRSFFPSIMDRNKTGLLGTFWKCARIGERKSPYVAVCCILMAFSILFLT

Description

Involved in the early part of the secretory pathway.

Similarity

Belongs to the KISH family.

Keywords

Alternative splicing   Complete proteome   Glycoprotein   Golgi apparatus   Membrane   Reference proteome   Signal   Transmembrane   Transmembrane helix  

Feature

chain  Protein kish
splice variant  In isoform 2.

Uniprot

A0A2A4JMG3   A0A3S2M9R8   A0A2H1VH98   S4PRK6   A0A1S3F5P3   A0A2Y9E9E2   + More
Q9CR64   G1SX03   G3HIY0   A0A1U7Q3H3   A0A2K6DKG4   A0A384DC35   A0A2K5TRF5   A0A2I2YI11   J9PA57   G1RS06   A0A341AJU3   A0A2K5XZS7   A0A0D9RQY1   L7MSG4   A0A2U3V117   A0A340WY62   A0A096N5T7   A0A2K5EW06   A0A2K6NP08   A0A337RXP3   A0A2K5MXT5   A0A2J8UWX7   A0A2Y9Q105   A0A2K5JK00   A0A2K5PW63   A0A384B1E0   A0A2K6UCB7   A0A3Q7UZM2   A0A2Y9EIM8   A0A2Y9K4G4   A0A2I3RLL4   F6UX17   F7CZW0   Q5RAL1   Q8TBQ9   Q148I3   F6QB86   A0A212ESU8   A0A1S3W5K3   A0A3Q0DP29   A0A287CTL9   A0A286ZZU9   A0A3Q7NLN3   A0A2U3WB94   G3WF08   A0A3Q2HPC2   A0A139WB28   G3T3B4   A0A2Y9I7L8   Q5ZII6   D3ZKR8   G9KTX6   G7P7W3   K9IPZ1   L8I4R5   U6DIV2   A0A2R9CL93   W5Q1X2   G7MV74   A0A452QGT6   A0A452SYL8   A0A061ICQ1   G1PCH9   A0A2U3YR52   A0A401PR58   A0A218V1K8   B5G2S6   G5AT29   H3ATJ1   A0A3S2M5J6   A0A452DSV2   A0A3Q7RTI8   A0A226PSG6   K7GCL9   F7EGZ2   B9EPW3   U3KEM4   A0A3B3RV02   A0A0B8RQD2   V8NW26   A0A1W7RGD9   A0A098LZ75   J3S4K2   T1DMN8   U3FCC0   A0A1V4KCI8   H0Z968   A0A1B0FJL8   A0A1A9URG6   B9ENZ0   H0WZS0   F6SWM3   A0A1I8NC81   A0A1L8EHD6  

Pubmed

23622113    16141072    15489334    21183079    21993624    21804562    + More
22398555    16341006    25362486    17975172    16136131    17431167    25319552    25243066    19942856    21269460    17495919    22118469    21709235    19892987    18362917    19820115    15642098    15057822    23236062    22002653    22751099    22722832    20809919    24813606    23929341    30297745    17018643    21993625    9215903    24621616    17381049    18464734    20433749    29240929    25476704    24297900    26358130    23025625    23758969    25727380    23915248    20360741    25315136   

EMBL

NWSH01001071    PCG72774.1    RSAL01000006    RVE54284.1    ODYU01002522    SOQ40121.1    + More
GAIX01014653    JAA77907.1    AK002884    AK007771    AK007966    AK012161    AK016036    AK016737    AK021263    AK031706    AK032474    AK088895    AK132361    AK160704    AK161037    BC024352    AAGW02043212    JH000415    EGW09303.1    AQIA01059417    CABD030039388    CABD030039389    AAEX03002093    ADFV01005004    AQIB01086873    HQ890242    AEB61397.1    AHZZ02029403    AHZZ02029404    AANG04001174    NDHI03003441    PNJ49771.1    AACZ04061908    NBAG03000226    PNI73115.1    JSUE03036328    JU320541    JU474457    JV046283    AFE64297.1    AFH31261.1    AFI36354.1    GAMT01006164    GAMS01006084    GAMR01009562    GAMQ01000589    GAMP01009390    JAB05697.1    JAB17052.1    JAB24370.1    JAB41262.1    JAB43365.1    CR859004    CR859096    BC026285    BC028585    BC107575    BC118303    AGBW02012716    OWR44572.1    AGTP01000048    AEMK02000012    AEFK01058770    KQ971375    KYB25120.1    AJ720798    AABR07007558    JP019757    AES08355.1    CM001281    EHH54384.1    GABZ01003190    JAA50335.1    JH882155    ELR50549.1    HAAF01010223    CCP82047.1    AJFE02077266    AMGL01094226    CM001258    EHH26635.1    KE668842    ERE83425.1    AAPE02000595    BFAA01013790    GCB75600.1    MUZQ01000074    OWK59621.1    DQ216283    JH166825    EHB00190.1    AFYH01075188    AFYH01075189    AFYH01075190    AFYH01075191    AFYH01075192    CM012445    RVE68342.1    LWLT01000004    AWGT02000023    OXB82628.1    AGCU01094794    AAPN01060381    BT057688    ACM09560.1    AGTO01001644    GBSH01001427    JAG67599.1    AZIM01001790    ETE65757.1    GDAY02001228    JAV50199.1    GBSI01001230    JAC95266.1    JU174911    GBEX01001731    AFJ50437.1    JAI12829.1    GAAZ01001217    GBKC01001821    GBKD01001101    JAA96726.1    JAG44249.1    JAG46517.1    GAEP01000817    GBEW01000489    JAB54004.1    JAI09876.1    LSYS01003952    OPJ82124.1    ABQF01040005    ABQF01040006    ABQF01040007    ABQF01040008    ABQF01040009    ABQF01040010    ABQF01040011    ABQF01040012    ABQF01040013    CCAG010019814    BT057365    ACM09237.1    AAQR03040317    GFDG01000763    JAV18036.1   

Proteomes

UP000218220    UP000283053    UP000081671    UP000248480    UP000000589    UP000001811    + More
UP000001075    UP000189706    UP000233120    UP000261680    UP000233100    UP000001519    UP000002254    UP000001073    UP000252040    UP000233140    UP000029965    UP000245320    UP000265300    UP000028761    UP000233020    UP000233200    UP000011712    UP000233060    UP000248483    UP000233080    UP000233040    UP000261681    UP000233220    UP000286642    UP000248484    UP000248482    UP000002277    UP000006718    UP000008225    UP000001595    UP000005640    UP000009136    UP000002280    UP000007151    UP000079721    UP000189704    UP000005215    UP000008227    UP000286641    UP000245340    UP000007648    UP000002281    UP000007266    UP000007646    UP000248481    UP000000539    UP000002494    UP000009130    UP000240080    UP000002356    UP000291022    UP000291021    UP000030759    UP000001074    UP000245341    UP000288216    UP000197619    UP000007754    UP000006813    UP000008672    UP000291000    UP000286640    UP000198419    UP000007267    UP000002279    UP000087266    UP000016665    UP000261540    UP000190648    UP000092444    UP000078200    UP000005225    UP000095301   

PRIDE

Q9CR64    Q8TBQ9    Q148I3    D3ZKR8   

Pfam

PF06842   DUF1242

Interpro

IPR009653   Ksh1       

ProteinModelPortal

A0A2A4JMG3   A0A3S2M9R8   A0A2H1VH98   S4PRK6   A0A1S3F5P3   A0A2Y9E9E2   + More
Q9CR64   G1SX03   G3HIY0   A0A1U7Q3H3   A0A2K6DKG4   A0A384DC35   A0A2K5TRF5   A0A2I2YI11   J9PA57   G1RS06   A0A341AJU3   A0A2K5XZS7   A0A0D9RQY1   L7MSG4   A0A2U3V117   A0A340WY62   A0A096N5T7   A0A2K5EW06   A0A2K6NP08   A0A337RXP3   A0A2K5MXT5   A0A2J8UWX7   A0A2Y9Q105   A0A2K5JK00   A0A2K5PW63   A0A384B1E0   A0A2K6UCB7   A0A3Q7UZM2   A0A2Y9EIM8   A0A2Y9K4G4   A0A2I3RLL4   F6UX17   F7CZW0   Q5RAL1   Q8TBQ9   Q148I3   F6QB86   A0A212ESU8   A0A1S3W5K3   A0A3Q0DP29   A0A287CTL9   A0A286ZZU9   A0A3Q7NLN3   A0A2U3WB94   G3WF08   A0A3Q2HPC2   A0A139WB28   G3T3B4   A0A2Y9I7L8   Q5ZII6   D3ZKR8   G9KTX6   G7P7W3   K9IPZ1   L8I4R5   U6DIV2   A0A2R9CL93   W5Q1X2   G7MV74   A0A452QGT6   A0A452SYL8   A0A061ICQ1   G1PCH9   A0A2U3YR52   A0A401PR58   A0A218V1K8   B5G2S6   G5AT29   H3ATJ1   A0A3S2M5J6   A0A452DSV2   A0A3Q7RTI8   A0A226PSG6   K7GCL9   F7EGZ2   B9EPW3   U3KEM4   A0A3B3RV02   A0A0B8RQD2   V8NW26   A0A1W7RGD9   A0A098LZ75   J3S4K2   T1DMN8   U3FCC0   A0A1V4KCI8   H0Z968   A0A1B0FJL8   A0A1A9URG6   B9ENZ0   H0WZS0   F6SWM3   A0A1I8NC81   A0A1L8EHD6  

KEGG

101743845    no KO assigned | (RefSeq) protein kish-A

GO

GO:0016021   GO:0000139   GO:0009306   GO:0046907   GO:0005623  

Subcellular location

Golgi apparatus membrane  

Length:

72

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

39.10899

Exp number, first 60 AAs:

28.54485

Total prob of N-in:

0.13880

POSSIBLE N-term signal

sequence

outside

1  -  4

TMhelix

5  -  27

inside

28  -  53

TMhelix

54  -  71

outside

72  -  72

 

 

Pi

124.984413

Theta

113.70365

Tajima's D

0.164922

CLR

10.505806

CSRT

0.414329283535823

Interpretation

Uncertain