SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12614
Annotation
AF461149_1_transposase_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.727
 

Sequence

CDS
ATGAAGACTAGTGTAGATGACAGGTCAAGAAGTGGTCGCCCTCGGTCTGTTAGGACTCCAGCAGTGATAAAAGCTGTGAAGGCGCGAATTCAAAGAAATCCCAAACGTAAGCAGAAACTGTTGGCCCTTCAGATGGGGTTAAGCAGAACCACGGTGAAAAGGGTGTTAAATGAAGACTTAGGGCTTCGGGCATATCGAAGAAAAACAGGACATCGTTTGAATGCTCGTCTAATGGACCTGAGACTGAAGAGATGCCGCGAAGAGAGCTACAACAAACAAAATGATAAGGTGTACGCACACAGTAGTGAAGAAGCGAGCAACCGTATTCCGCGTGTCCAACGAGGTCATTTTCCATCCTCGCTCATGGTATGGTTGGGAGTTTCTTATTGGGGCTTAACAGAGGTACATTTTTGTGAGAAAGGTGTAAAAACGAATGCAGTTGTGTATCAAAATACAGTCCTGACGAACCTTGTGGAACCTGTTTCTCATACCATGTTCAATAACAGGCACTGGGTATTCCAACAAGATTCGGCGCCAGCTCATAGAGCGAAGAGCACACAAGACTGGCTGGCGGCGCGTGAAATCGACTTCATCCGACATGAAGACTGGCCCTCCTCCAGTCCAGATTTGAATCCGTTAGATTACAAGATATGGCAACACTTGGAGGAAAAGGCGTGCTCAAAGCCTCATCCCAATTTGGAGTCACTCAAGACATCCTTGATTAAGGCAGCCGCCGAAATTGACATGAACCTCGTTCGTGCTGCGATAGACGACTGGCCGCGCAGATTAAAGGCCTGTATTCAAAATCACGGAGGTCATTTTGAATAA
Protein
MKTSVDDRSRSGRPRSVRTPAVIKAVKARIQRNPKRKQKLLALQMGLSRTTVKRVLNEDLGLRAYRRKTGHRLNARLMDLRLKRCREESYNKQNDKVYAHSSEEASNRIPRVQRGHFPSSLMVWLGVSYWGLTEVHFCEKGVKTNAVVYQNTVLTNLVEPVSHTMFNNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAAEIDMNLVRAAIDDWPRRLKACIQNHGGHFE

Summary

Similarity
Belongs to the TGF-beta family.
Belongs to the UDP-glycosyltransferase family.
EMBL
AF461149    AAN06610.1    AB363028    BAG15927.1    AB363006    AB363010    + More
AB363014    BAG15923.1    BAG15924.1    AB473770    BAH20555.1    AB363018    BAG15926.1    RSAL01001770    RVE40705.1    RSAL01000084    RVE48403.1    RSAL01000191    RVE44681.1    RSAL01000063    RVE49524.1    RSAL01000012    RVE53510.1    RSAL01000392    RVE41996.1    RSAL01000022    RVE52367.1    RSAL01000021    RVE52408.1    U47917    AAB47739.1    RSAL01000140    RVE46091.1    JF779677    AEO90418.1    RSAL01000073    RVE49012.1    RSAL01000039    RVE51021.1    RSAL01000133    RVE46339.1    RSAL01000016    RVE53060.1    RSAL01000470    RVE41612.1    RSAL01000236    RVE43715.1    RSAL01002114    RVE40580.1    RSAL01000006    RVE54275.1    LNIX01000030    OXA41211.1    RSAL01000009    RVE53890.1    RSAL01000677    RVE41245.1    JARK01001411    EYC06502.1    PDUG01000005    PIC23776.1    CAVP010059404    CDL95787.1    DS268612    EFO94085.1    UYSL01019905    VDL71189.1    PIC29926.1    PDUG01000001    PIC51673.1    JARK01000255    EYC39473.1    JARK01001658    EYB84158.1    PIC28734.1    DS268747    EFP00909.1    JARK01000059    EYC44525.1    PDUG01000006    PIC20538.1    DS268466    EFP06959.1    DS268508    EFO83264.1    JARK01000176    EYC41234.1    JARK01001337    EYC34439.1    KN728607    KIH63514.1    DS268421    EFO88618.1    DS268492    EFP11689.1    DS268679    EFO98285.1    JOJR01000583    RCN36166.1    PDUG01000004    PIC32571.1    DS268673    EFO98001.1    JARK01001345    EYC27589.1    DS268525    EFO85497.1    PDUG01000012    PIC13506.1    JOJR01000015    RCN51257.1    UZAH01029309    VDP05368.1    DS268545    EFO88382.1    DS268428    EFO94379.1    UZAH01027257    VDO90094.1    DS268606    EFO93488.1    JARK01001601    EYB87313.1    DS268420    EFO87874.1    PIC32570.1    UYSL01020440    VDL74616.1    KX931010    APL98300.1   
Pfam
PF00019   TGF_beta        + More
PF07992   Pyr_redox_2
PF16095   COR
PF00069   Pkinase
PF00201   UDPGT
PF13358   DDE_3
PF00292   PAX
PF00250   Forkhead
Interpro
IPR009057   Homeobox-like_sf        + More
IPR036259   MFS_trans_sf       
IPR001839   TGF-b_C       
IPR029034   Cystine-knot_cytokine       
IPR017948   TGFb_CS       
IPR015615   TGF-beta-rel       
IPR036188   FAD/NAD-bd_sf       
IPR023753   FAD/NAD-binding_dom       
IPR032171   COR       
IPR020859   ROC_dom       
IPR000719   Prot_kinase_dom       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR027417   P-loop_NTPase       
IPR002213   UDP_glucos_trans       
IPR035595   UDP_glycos_trans_CS       
IPR038717   Tc1-like_DDE_dom       
IPR001523   Paired_dom       
IPR036388   WH-like_DNA-bd_sf       
IPR036390   WH_DNA-bd_sf       
IPR001766   Fork_head_dom       
IPR030456   TF_fork_head_CS_2       
SUPFAM
SSF46689   SSF46689        + More
SSF103473   SSF103473       
SSF57501   SSF57501       
SSF51905   SSF51905       
SSF56112   SSF56112       
SSF52540   SSF52540       
SSF50998   SSF50998       
SSF46785   SSF46785       
Gene 3D
PDB
5CR4     E-value=5.13318e-10,     Score=152

Ontologies

Topology

Subcellular location
Secreted  
Nucleus  
Length:
275
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.51558
Exp number, first 60 AAs:
0.00073
Total prob of N-in:
0.20460
outside
1  -  275
 
 

Population Genetic Test Statistics

Pi
93.421541
Theta
76.486055
Tajima's D
0.792945
CLR
0
CSRT
0.6003199840008
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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