SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12613
Pre Gene Modal
BGIBMGA001552
Annotation
PREDICTED:_probable_phospholipid-transporting_ATPase_IM_isoform_X3_[Bombyx_mori]
Full name
Phospholipid-transporting ATPase      
Location in the cell
PlasmaMembrane   Reliability : 4.594
 

Sequence

CDS
ATGTGTGTCGATGGTGCGGCCGACATGGGAAAGTCCTCGGCGAGAACACATGGCCAAGAAAATGAACGAAGAATCAAAGCGAATAACAGGGAATATAACGCGCAGTTTCGTTATGCCAATAACTACATCAAGACTTCGAAGTATTCGATTATAACGTTCCTGCCGCTGAACTTGTTAGAACAGTTTCAGCGGCTAGCGAACTTTTATTTCTTGTGCCTGTTGGTCCTTCAACTGATCCCGGCTATCTCCTCGCTGACGCCGATAACCACAGCGATACCTCTTATTGGTGTGCTAGCCCTCACTGCCGTCAAGGACGCTTACGACGATTTCCAACGTCATCAAAACGATTCGCAAGTGAATCACAGGCGAGCCAAGACCTTGCGTAATGGCAAGCTTGTGGAGGAGAAATGGGCGTCTGTTCAGGTGGGAGATGTCATCAGGTTGGAGAACGACCAGTTCGTCGCGGCCGACATCCTACTTCTCAGCAGCTCGGAACCTAACGGACTTTGTTACATAGAAACCGCCGAGCTTGATGGGGAGACGAATTTGAAATGTCGTCAGTGCCTTTTGGAGACGGCCGCAATGGGCCAAGACGACGCACAACTGGGCGCGTTCGATGGTGAAATTGTTTGCGAAACGCCCAACAATCTACTTAATAAGTTTGAAGGTACGTTAAGTTGGCGTAACCAACACTTTTCACTCGACAACGATAAGATTCTGTTGCGCGGATGCGTGCTCCGCAACACGTCGTGGTGCTACGGCGTCGTTGTCTTTGCCGGGAAGGACACTAAACTAATGCAGAACTCCGGCAAGACGAAGTTCAAGCGCACCAGCATAGACAGACTACTTAATTTTCTTATCATAGGGATAGTATTCTTTCTGCTGTCTATGTGCGTGTTCTGCACGGTGGCGTGCGGGGTGTGGGAGTGGCTGGTGGGGCGCTACTTCCAGGTGTACCTGCCTTGGGACACGCTGGTGCCGGCCGACCCCACGTGGGGCGCTGTCATCATCGCCCTGCTCGTGTTCTTCTCTTACGCCATCGTGATGAACACTGTCGTGCCTATATCGCTTTATGTTTCTGTTGAAGTTATAAGATTTGCCCAGAGTTTTCTTATTAATTGGGATGAAAAAATGTACTATGAAAAAACTGGTACCGCAGCCAAAGCGCGGACCACCACACTTAACGAAGAACTAGGGCAAATCCAGTATATATTTTCTGATAAAACGGGAACTCTCACGCAAAACATAATGACGTTCAATAAGTGTTCGATAGCGGGCGTTTGCTACGGAGACGTCGTGGACGAGACCACCGGGGAGACTCTGGAGATAAACGAGAGCTCGGAGCCTTTAGATTTCTCGTTCAATCCTGAATACGAGCCGGAGTTTAAGTTCTTCGATCCGACGCTACTAGACGCGGTGAAGCGCGGGGATTCACACGTTCACGACTTCTTTCGTCTCTTGGCGCTTTGTCACACGGTCATGCCGGACCAGAAGAATGGACGGCTCGAATACCAGGCCCAATCGCCAGACGAGTCGGCGCTGGTGTCCGCAGCAAGAAACTTCGGTTTTGTGTTTAGAGAACGTTCGCCTAATAGTATTACAATAGAAGTAATGGGTAACACAGAGGTGTATGAATTGTTATGTATATTAGATTTTAATAATGTTAGAAAAAGAATGTCCGTGATATTGAGGAAGGATGGTGAAATTAGGTTATATACAAAAGGTGCTGATAATGTAATATATGAAAGATTAAAGGCAACTAAAGGAGATGTTAAGTCTAAAACACAGGAACATTTAAATAAATTCGCCGGGGAAGGTTTGAGGACACTGGCGCTGGCGTGGCGGCCGCTGGAGGAGCGCGGGTTCGCCGAGTGGAAGCGCCGCCACCACGCCGCTGCGCTCGCGCTGCACGACCGGGACGAGCAGCTCGACGCCATCTACGAGGAGATCGAGACCGACCTGCTACTGCTGGGCGTGACAGCCATTGAAGATAAACTACAAGATGGAGTACCAGAAACAATAGCGAATCTCAGCATGGCCGGTATAAAGATCTGGGTGTTAACAGGAGATAAACAAGAAACCGCTATAAACATCGGGTACTCGTGTCAGTTGCTGACCGACGACATGGCGGAGGTGTTCGTCGTCGACGGCGCGTCCTACGATGACGTCAACAAGCAGCTGGCCAAGTGCAGGGATTCGATACGGGTCGTCAACACCTTCATGCCGCACGGTCCCCGGTCGTCGGATGCGAAGCGCGACGAGGAGCCTAACGGGGCGGTGTCGGGCCGCGGCGCCAACGTCAAGCTGAACGCGCCCGCCGTCTCCGTCGTCACGTTTAGCAACGAGTACGTGTCTGGGGGCGCGCACACCTCTGAGCCTCACGAGCACGCCAACGACGACTCCAACGGGTTCGCCATCGTCGTCAACGGGCACTCGCTAGTGCACTGTCTGCACCCTAAACTAGAGGAAAAATTTTCAGAAGTAGTATTACACTGTCGATCTGTGATCTGTTGTCGAGTGACTCCACTGCAAAAGGCGATGGTGGTAGAATTAATAAAGAAAAGCAGAAAAGCCGTGACGCTGGCTATAGGCGACGGAGCCAACGACGTGTCCATGATCAAAGCGGCCCACATCGGCGTGGGCATATCAGGCCAAGAGGGCATGCAGGCGGTGCTCGCGTCGGACTACTCCATAGCCCAGTTCCGGTTCCTCCAGCGCCTATTGCTGGTGCACGGGCGCTGGTCCTACTACCGGATGTGTAAATTCCTAAGATATTTCTTCTACAAAAACTTCGCATTCACCGTCTGTCATTTCTGGTTCGCGTTCTTCTGTGGATTCAGTGCGCAGACGGTGTTCGACGAGATGTTCATCTCGGTGTACAACCTGTTCTACACGTCGCTGCCGGTGCTGGCGCTGGGCGTGTTCGAGCAGGACGTGTCGGACGCGACGTCGCTGCAGTTCCCGAAGCTGTACGCGCCGGGACACACCAGCCAGCTCTTCAACAAGACGGAGTTCATCAAGTCCACGCTGCACGGCTGCTTCACCTCGCTCGTGCTCTTCCTCATCCCTTACGGTACGTACAACGATGGGCTGGCGGCGGACGGGCGGGTGCTGTCGGACCACATGCTCCTGGGCAGCGTAGTGGCCACGATACTGATAATAGATAATACAACTCAGATTGCACTGGACACGACGTACTGGACCGTGTTCAACCACGTCACGATCTGGGGCTCGCTCGTGTCGTACTTCGTGCTGGACTACTTCTACAACTACGCCATCGGCGGCCCGTACGTCGGCTCGCTCACCGTGGCGCTCACGCAACCCACCTTCTGGTTCACGGCCGTATTGACCATGATAATCCTGATGGTGCCGGTGGTGTCGTGGCGGCTGGCGAGCGCCCGAGCGCGCGGCACGCTGGCGGAGCGCCTGCGGCTGCGGCAGCGGTGGCGCGGCGCCGCCCCCGCCCCCCGCACTCCCTCCGCCCGCCGCGCGCGCCGCTCCGTGCGCTCCGGGTACGCCTTCGCGCACCAGGAGGGCTTCGGCCGTCTCATCACGTCCGGCAAGATCATGCGCCGCATCCCGCACGCCGACGCCGCCTTCTCCGCGCTCGCCTCGCTGCCCGGGAAGTTCCACGCGCGCCCCTCCTCGCCGCCACCAGAGCCCAAGGCGCCCACGCAGAACCTTGATACAGTCGACCTGTGA
Protein
MCVDGAADMGKSSARTHGQENERRIKANNREYNAQFRYANNYIKTSKYSIITFLPLNLLEQFQRLANFYFLCLLVLQLIPAISSLTPITTAIPLIGVLALTAVKDAYDDFQRHQNDSQVNHRRAKTLRNGKLVEEKWASVQVGDVIRLENDQFVAADILLLSSSEPNGLCYIETAELDGETNLKCRQCLLETAAMGQDDAQLGAFDGEIVCETPNNLLNKFEGTLSWRNQHFSLDNDKILLRGCVLRNTSWCYGVVVFAGKDTKLMQNSGKTKFKRTSIDRLLNFLIIGIVFFLLSMCVFCTVACGVWEWLVGRYFQVYLPWDTLVPADPTWGAVIIALLVFFSYAIVMNTVVPISLYVSVEVIRFAQSFLINWDEKMYYEKTGTAAKARTTTLNEELGQIQYIFSDKTGTLTQNIMTFNKCSIAGVCYGDVVDETTGETLEINESSEPLDFSFNPEYEPEFKFFDPTLLDAVKRGDSHVHDFFRLLALCHTVMPDQKNGRLEYQAQSPDESALVSAARNFGFVFRERSPNSITIEVMGNTEVYELLCILDFNNVRKRMSVILRKDGEIRLYTKGADNVIYERLKATKGDVKSKTQEHLNKFAGEGLRTLALAWRPLEERGFAEWKRRHHAAALALHDRDEQLDAIYEEIETDLLLLGVTAIEDKLQDGVPETIANLSMAGIKIWVLTGDKQETAINIGYSCQLLTDDMAEVFVVDGASYDDVNKQLAKCRDSIRVVNTFMPHGPRSSDAKRDEEPNGAVSGRGANVKLNAPAVSVVTFSNEYVSGGAHTSEPHEHANDDSNGFAIVVNGHSLVHCLHPKLEEKFSEVVLHCRSVICCRVTPLQKAMVVELIKKSRKAVTLAIGDGANDVSMIKAAHIGVGISGQEGMQAVLASDYSIAQFRFLQRLLLVHGRWSYYRMCKFLRYFFYKNFAFTVCHFWFAFFCGFSAQTVFDEMFISVYNLFYTSLPVLALGVFEQDVSDATSLQFPKLYAPGHTSQLFNKTEFIKSTLHGCFTSLVLFLIPYGTYNDGLAADGRVLSDHMLLGSVVATILIIDNTTQIALDTTYWTVFNHVTIWGSLVSYFVLDYFYNYAIGGPYVGSLTVALTQPTFWFTAVLTMIILMVPVVSWRLASARARGTLAERLRLRQRWRGAAPAPRTPSARRARRSVRSGYAFAHQEGFGRLITSGKIMRRIPHADAAFSALASLPGKFHARPSSPPPEPKAPTQNLDTVDL

Summary

Catalytic Activity
ATP + H(2)O + phospholipid(Side 1) = ADP + phosphate + phospholipid(Side 2).
Similarity
Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
Feature
chain  Phospholipid-transporting ATPase
EC Number
7.6.2.1
EMBL
RSAL01000006    RVE54299.1    AGBW02009427    OWR50842.1    AXCM01002117    KQ971381    + More
EEZ97214.2    KK853171    KDR10311.1    GEZM01066269    JAV68027.1    GEZM01066270    JAV68026.1    KYB24975.1    GFDF01009445    JAV04639.1    AXCN02001467    GALX01004830    JAB63636.1    AAAB01008859    EAA08202.6    GAMC01014902    JAB91653.1    GAMC01014903    JAB91652.1    GAKP01021748    JAC37204.1    GBXI01007068    JAD07224.1    GAMC01014904    JAB91651.1    JRES01001043    KNC26014.1    KA648285    AFP62914.1    GDKW01002998    JAI53597.1    GFTR01008685    JAW07741.1    GBGD01000159    JAC88730.1    GECL01003594    JAP02530.1    CVRI01000002    CRK86707.1    CH940651    KRF82341.1    KRF82340.1    EDW65689.2    KRF82339.1    AE014297    AHN57293.1    CH902617    KPU79470.1    CH964239    EDW81882.2    CP012528    ALC48655.1    ODYU01005171    SOQ45776.1    CM000160    KRK03508.1    AFH06386.1    CM000070    KRT00904.1    DS235478    EEB16029.1    GDHC01001858    JAQ16771.1    GBHO01025007    GDHC01016406    JAG18597.1    JAQ02223.1    GDRN01100874    JAI58472.1    NEVH01023281    PNF18041.1    PNF18044.1    PNF18043.1    GGLE01006546    MBY10672.1    GFAH01000089    JAV48300.1    GEDV01010411    JAP78146.1    GBRD01015209    JAG50617.1    JH432130    GBRD01015211    GBRD01015208    JAG50618.1    LJIJ01000231    ODN00134.1    GANP01007238    JAB77230.1    CAEY01001871    NCKU01002575    RWS09297.1    GFAC01001260    JAT97928.1    GACK01009343    JAA55691.1    GANP01012649    JAB71819.1    RQTK01000026    RUS90719.1    GAKP01021747    JAC37205.1    NEDP02076748    OWF34874.1    HACA01016784    CDW34145.1    MTYJ01000056    OQV17784.1    JARK01000193    EYC40856.1    EYC40855.1    EYC40857.1    UZAF01020393    VDO69474.1    BX284604    CDH93219.1    CCD72223.2    CDH93218.1    CDH93217.1    CDH93216.1    CCD72226.1    KL363204    KFD54817.1    KL367481    KFD71690.1    PDUG01000004    PIC32414.1    PIC32415.1    JYDH01000046    KRY36067.1    KRY36069.1    JYDW01000243    KRZ50984.1   
Pfam
PF16209   PhoLip_ATPase_N        + More
PF16212   PhoLip_ATPase_C
Interpro
IPR030348   ATP8B4        + More
IPR032631   P-type_ATPase_N       
IPR036412   HAD-like_sf       
IPR023298   ATPase_P-typ_TM_dom_sf       
IPR008250   ATPase_P-typ_transduc_dom_A_sf       
IPR001757   P_typ_ATPase       
IPR023299   ATPase_P-typ_cyto_dom_N       
IPR006539   P-type_ATPase_IV       
IPR032630   P_typ_ATPase_c       
IPR018303   ATPase_P-typ_P_site       
IPR023214   HAD_sf       
IPR030350   FetA       
IPR030347   ATP8B2       
SUPFAM
SSF56784   SSF56784        + More
SSF81660   SSF81660       
SSF81653   SSF81653       
SSF81665   SSF81665       
Gene 3D
PDB
6A69     E-value=1.0989e-11,     Score=174

Ontologies

Topology

Subcellular location
Membrane  
Length:
1233
Number of predicted TMHs:
9
Exp number of AAs in TMHs:
203.38343
Exp number, first 60 AAs:
1.43746
Total prob of N-in:
0.23458
outside
1  -  77
TMhelix
78  -  100
inside
101  -  281
TMhelix
282  -  311
outside
312  -  330
TMhelix
331  -  353
inside
354  -  921
TMhelix
922  -  941
outside
942  -  955
TMhelix
956  -  975
inside
976  -  1004
TMhelix
1005  -  1027
outside
1028  -  1036
TMhelix
1037  -  1054
inside
1055  -  1066
TMhelix
1067  -  1089
outside
1090  -  1108
TMhelix
1109  -  1131
inside
1132  -  1233
 
 

Population Genetic Test Statistics

Pi
196.092795
Theta
17.68711
Tajima's D
-1.102085
CLR
0.508612
CSRT
0.12094395280236
Interpretation
Uncertain
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