Gene

KWMTBOMO12611  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001551

Annotation

ubiquilin_1?2_[Danaus_plexippus]

Location

Bomo_Chr21(+):9244330-9253384      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.33

CDS

ATGGCAGAGGGACAAGACGACCCTAAAAAAATTACGATCACAGTTAAAACCCCGAAAGAGAAGCAGCAAGTTGAAATTGAGGAAGATGCCGATATCAAAAGACTCAAAGAAGTGTTGTCTTCAAAATTCAGTACAGAACCAGAACAATTATGTCTTATTTTCGCCGGGAAAATCATGAATGATGCCGATACCCTGAAGCAACACAACATCAAAGATGGGTTGACAGTGCATCTAGTGATTAAAGCTCCTCCAAGACCAGAACCGGAGGGTGCGGCTCGTAGACCCCCAGCTGACGTCAGTGCTACACCATTTGGTTTAAACTCGCTGGGTGGGCTGGCGGGTCTTGAAAGCTTGGGCCTTGGTCAGAGTACTTTTATGGATCTCCAGGCTAGAATGCAACAGGAACTTCTGTCCAACCCTGATATGCTCAGACAAGTCTTAGACAATCCATTGGTGCAGCAGATGATGAATGATCCTGAGAATATGCGTAGCCTCATCACCTCCAACCCACAAATGCAAGATCTCATGTCTAGAAATCCAGAAATCAGTCATATGTTAAACAATCCTGAATTATTACGTCAAACTATGGAGTTGGCTCGCAACCCCGCTATGTTGCAAGAGTTGATGCGCTCACACGACCGCGCCCTCTCCAATCTCGAAAGTATACCAGGTGGTTACAATGCGCTCCAAAGAATGTATAGGGACATACAGGAACCGATGCTCAATGTGGCCAGTAGCATGGCAGGGAACCCTTTCTCTGGACTCGTAGACAATTCTGACGGCACAAACCCGCAGCAAGGATCTGAGAACAGGCAGCCGCTACCCAACCCGTGGCAGCGTGGTGGAGGAGGAGGCGGCGGCGGAGCTTCCCAGGGCAGTGCCTCTGCGGCCGGCTCGGGCTCCGGTCCCGGCCTCATCAATACACCCGGCATGCAATCTCTTCTGCAACAGATGTCAGAAAATCCTCGCCTTGTCCAGTCTATGCTCTCTGCGCCATACACCAACTCCATGTTACAGGCCCTTAGTGCTGACCCCGAAATGGCATCTCAACTAATTAATCAGAATCCAATGTTCGCCAACAATCCGCAACTTCAAGACCAAATCCGCACAATGATGCCGCAACTTCTCGCTCAGCTACAGAACCCTGAAATGCAACAGATGATGTCTAATCCGCAGGCGTTGAATGCTCTGCTACAAATACAACAAGGCATGGAACAGTTGCGTACAGCGGCGCCCAGCCTTGTCAACAACTTGGGCATGGGCGTGGGCGCCGCCGCCGCCACGCCGCCGGCCCAACCGCCCAGCGCTGCCCAGAACCCCGCCCAGGCACGACAACAAAACAATTCTGAACTCTTCACGCAGTTTATGCAACGGATGATGTCGGCCATGTCGAACAACCAGACGAACACACAGCAGCCCCCTGAGCAACGTTATTCCCAACAATTGGAGCAACTGGCTGCCATGGGCTTCCTGAATAGGGAGGCCAATTTACAAGCTCTAATCGCGACATTTGGGGATGTAAACGCGGCGGTGGAGAGGCTACTGGCGCTTGGTCAGCTCTCCATGAGCTAA

Protein

MAEGQDDPKKITITVKTPKEKQQVEIEEDADIKRLKEVLSSKFSTEPEQLCLIFAGKIMNDADTLKQHNIKDGLTVHLVIKAPPRPEPEGAARRPPADVSATPFGLNSLGGLAGLESLGLGQSTFMDLQARMQQELLSNPDMLRQVLDNPLVQQMMNDPENMRSLITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAMLQELMRSHDRALSNLESIPGGYNALQRMYRDIQEPMLNVASSMAGNPFSGLVDNSDGTNPQQGSENRQPLPNPWQRGGGGGGGGASQGSASAAGSGSGPGLINTPGMQSLLQQMSENPRLVQSMLSAPYTNSMLQALSADPEMASQLINQNPMFANNPQLQDQIRTMMPQLLAQLQNPEMQQMMSNPQALNALLQIQQGMEQLRTAAPSLVNNLGMGVGAAAATPPAQPPSAAQNPAQARQQNNSELFTQFMQRMMSAMSNNQTNTQQPPEQRYSQQLEQLAAMGFLNREANLQALIATFGDVNAAVERLLALGQLSMS

Uniprot

H9IWC0   A0A3S2LTJ9   A0A194Q2A7   A0A212ERL7   A0A194RE74   A0A2H1WGF9   + More
A0A2A4JS84   A0A1J1HGF0   A0A1L8DTQ8   A0A1L8DTB5   A0A1L8DTF8   Q173F1   A0A1B0GHP8   T1DGD8   A0A1Q3F776   W8C2W7   A0A023EUF3   A0A1Q3F763   A0A0A1WF01   U4U5R2   U5EXH3   B0X9R6   A0A182MV83   A0A1B0FMC2   A0A1A9VRD3   A0A1B0A072   A0A182XWQ5   A0A1I8Q6Z1   A0A195CAR5   A0A0L0CKZ4   A0A1A9WDQ8   A0A084VKC9   A0A1A9XCV3   A0A1B0BB63   A0A195FQ64   A0A0K8U8J7   A0A1W4WYK4   A0A034V9S6   A0A154PQ24   A0A182JPD8   A0A026VSY7   A0A195BWF0   A0A182VY54   A0A151WTD4   A0A0J7L6T5   D6W827   T1PGC7   A0A1I8M2W4   E2B3D5   A0A0K8TLF3   A0A182R5M0   A0A182Q7D6   K7JBY3   E2ASX1   A0A182ND48   A0A1Y1L2M1   A0A088A464   A0A182FR42   W5JA64   V9IJL2   A0A2M4BKB1   A0A1B0GQS7   A0A2M3Z1V4   A0A2M4BJJ9   A0A182U1R0   A0A2M3Z1U6   A0A2M4A540   A0A182ID34   A0A232F357   A0A0L7R651   N6T2B9   A0A182X8V2   A0A182L6X0   Q7QAD3   B3MQC7   E0VMA5   A0A182VNZ2   B4L7Z6   A0A182PRH1   F4WXI6   A0A182ISQ4   A0A0M3QZL1   A0A2J7QHQ5   Q29HY5   B4H4Q9   A0A067RI93   B4MAQ9   B4JJH2   B4PZD9   B3NVS4   A0A1W4VHM1   A0A2A3EM70   A0A0K8VMF2   A0A182SUX1   A0A310SIL4   A0A069DV02   A0A0M9A816   E9GGP4   A0A158NV21  

Pubmed

19121390    26354079    22118469    17510324    24330624    24495485    + More
24945155    26483478    25830018    23537049    25244985    26108605    24438588    25348373    24508170    30249741    18362917    19820115    25315136    20798317    26369729    20075255    28004739    20920257    23761445    28648823    20966253    12364791    14747013    17210077    17994087    20566863    21719571    15632085    24845553    17550304    26334808    21292972    21347285   

EMBL

BABH01006348    BABH01006349    RSAL01000244    RVE43596.1    KQ459564    KPI99702.1    + More
AGBW02012992    OWR44127.1    KQ460325    KPJ15769.1    ODYU01008504    SOQ52169.1    NWSH01000780    PCG74262.1    CVRI01000002    CRK86955.1    GFDF01004399    JAV09685.1    GFDF01004398    JAV09686.1    GFDF01004397    JAV09687.1    CH477425    EAT41184.1    AJWK01005404    GALA01001701    JAA93151.1    GFDL01011629    JAV23416.1    GAMC01010441    JAB96114.1    JXUM01085001    JXUM01085002    JXUM01085003    GAPW01001042    KQ563472    JAC12556.1    KXJ73777.1    GFDL01011640    JAV23405.1    GBXI01016820    JAC97471.1    KB631673    ERL85300.1    GANO01002537    JAB57334.1    DS232546    EDS43268.1    AXCM01005876    CCAG010005910    KQ978023    KYM97959.1    JRES01000256    KNC32916.1    ATLV01014180    KE524947    KFB38423.1    JXJN01011306    KQ981335    KYN42618.1    GDHF01029335    JAI22979.1    GAKP01020655    GAKP01020654    JAC38298.1    KQ435030    KZC13989.1    KK108171    QOIP01000009    EZA46847.1    RLU19012.1    KQ976401    KYM92610.1    KQ982769    KYQ50895.1    LBMM01000458    KMQ98288.1    KQ971307    EFA11174.1    KA646933    AFP61562.1    GL445323    EFN89813.1    GDAI01002421    JAI15182.1    AXCN02001605    AAZX01015638    GL442415    EFN63468.1    GEZM01069133    JAV66630.1    ADMH02001710    ETN61347.1    JR050358    AEY61250.1    GGFJ01004087    MBW53228.1    AJVK01008652    AJVK01008653    GGFM01001745    MBW22496.1    GGFJ01004086    MBW53227.1    GGFM01001756    MBW22507.1    GGFK01002519    MBW35840.1    APCN01004984    NNAY01001108    OXU25105.1    KQ414648    KOC66309.1    APGK01047252    KB741077    ENN74274.1    AAAB01008898    EAA09171.2    CH902621    EDV44553.1    DS235306    EEB14511.1    CH933814    EDW05571.1    GL888425    EGI61056.1    CP012528    ALC49569.1    NEVH01013972    PNF28124.1    CH379064    EAL31622.1    CH479209    EDW32671.1    KK852496    KDR22728.1    CH940655    EDW66318.1    CH916370    EDV99724.1    CM000162    EDX02095.1    CH954180    EDV46739.1    KZ288219    PBC32296.1    GDHF01012247    JAI40067.1    KQ762962    OAD55182.1    GBGD01001016    JAC87873.1    KQ435728    KOX77749.1    GL732543    EFX81452.1    ADTU01026858   

Proteomes

UP000005204    UP000283053    UP000053268    UP000007151    UP000053240    UP000218220    + More
UP000183832    UP000008820    UP000092461    UP000069940    UP000249989    UP000030742    UP000002320    UP000075883    UP000092444    UP000078200    UP000092445    UP000076408    UP000095300    UP000078542    UP000037069    UP000091820    UP000030765    UP000092443    UP000092460    UP000078541    UP000192223    UP000076502    UP000075881    UP000053097    UP000279307    UP000078540    UP000075920    UP000075809    UP000036403    UP000007266    UP000095301    UP000008237    UP000075900    UP000075886    UP000002358    UP000000311    UP000075884    UP000005203    UP000069272    UP000000673    UP000092462    UP000075902    UP000075840    UP000215335    UP000053825    UP000019118    UP000076407    UP000075882    UP000007062    UP000007801    UP000009046    UP000075903    UP000009192    UP000075885    UP000007755    UP000075880    UP000092553    UP000235965    UP000001819    UP000008744    UP000027135    UP000008792    UP000001070    UP000002282    UP000008711    UP000192221    UP000242457    UP000075901    UP000053105    UP000000305    UP000005205   

PRIDE

H9IWC0   

Pfam

PF00240   ubiquitin        + More
PF00627   UBA

Interpro

IPR015940   UBA        + More
IPR015496   Ubiquilin       
IPR029071   Ubiquitin-like_domsf       
IPR009060   UBA-like_sf       
IPR006636   STI1_HS-bd       
IPR000626   Ubiquitin_dom       
IPR019956   Ubiquitin       
IPR028799   UBQLN1       

SUPFAM

SSF46934   SSF46934        + More
SSF54236   SSF54236       

ProteinModelPortal

H9IWC0   A0A3S2LTJ9   A0A194Q2A7   A0A212ERL7   A0A194RE74   A0A2H1WGF9   + More
A0A2A4JS84   A0A1J1HGF0   A0A1L8DTQ8   A0A1L8DTB5   A0A1L8DTF8   Q173F1   A0A1B0GHP8   T1DGD8   A0A1Q3F776   W8C2W7   A0A023EUF3   A0A1Q3F763   A0A0A1WF01   U4U5R2   U5EXH3   B0X9R6   A0A182MV83   A0A1B0FMC2   A0A1A9VRD3   A0A1B0A072   A0A182XWQ5   A0A1I8Q6Z1   A0A195CAR5   A0A0L0CKZ4   A0A1A9WDQ8   A0A084VKC9   A0A1A9XCV3   A0A1B0BB63   A0A195FQ64   A0A0K8U8J7   A0A1W4WYK4   A0A034V9S6   A0A154PQ24   A0A182JPD8   A0A026VSY7   A0A195BWF0   A0A182VY54   A0A151WTD4   A0A0J7L6T5   D6W827   T1PGC7   A0A1I8M2W4   E2B3D5   A0A0K8TLF3   A0A182R5M0   A0A182Q7D6   K7JBY3   E2ASX1   A0A182ND48   A0A1Y1L2M1   A0A088A464   A0A182FR42   W5JA64   V9IJL2   A0A2M4BKB1   A0A1B0GQS7   A0A2M3Z1V4   A0A2M4BJJ9   A0A182U1R0   A0A2M3Z1U6   A0A2M4A540   A0A182ID34   A0A232F357   A0A0L7R651   N6T2B9   A0A182X8V2   A0A182L6X0   Q7QAD3   B3MQC7   E0VMA5   A0A182VNZ2   B4L7Z6   A0A182PRH1   F4WXI6   A0A182ISQ4   A0A0M3QZL1   A0A2J7QHQ5   Q29HY5   B4H4Q9   A0A067RI93   B4MAQ9   B4JJH2   B4PZD9   B3NVS4   A0A1W4VHM1   A0A2A3EM70   A0A0K8VMF2   A0A182SUX1   A0A310SIL4   A0A069DV02   A0A0M9A816   E9GGP4   A0A158NV21  

PDB

2NBV     E-value=2.22486e-11,     Score=167

KEGG

101740241    K04523 ubiquilin | (RefSeq) ubiquilin-1

PATHWAY

04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)

GO

GO:0005829   GO:0031593   GO:0006511   GO:0042982   GO:0070628   GO:0005515   GO:0005524   GO:0006468   GO:0004713   GO:0030286   GO:0008270   GO:0016787   GO:0004190   GO:0006508   GO:0016286  

PANTHER

PTHR10677   PTHR10677:SF16  

Length:

523

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0905200000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00550

outside

1  -  523

 

 

Pi

221.333818

Theta

169.915566

Tajima's D

0.932294

CLR

0.358272

CSRT

0.63756812159392

Interpretation

Uncertain