SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12605
Pre Gene Modal
BGIBMGA001427
Annotation
DET1-like_[Papilio_machaon]
Location in the cell
Nuclear   Reliability : 3.629
 

Sequence

CDS
ATGGAAAGAGAAATACACGGGTCACGGAAACCTGGATCGCATTTTCACGTTGTTCGTGAATTTTATCAGAATGTTTTTCCAAATTTAACTATCGTAAACGTTGAGAAACCTCCGTGCTTTTTGAGGAAGTTTAGTCCAGATGGTAAACATTTCATAGCATTCTCAGCTGATCAAACTTCTCTGGAGATCTATGAATACAGAGGTGCTTCTAGTGCAGGAGACTTAGTGGCTGGTTATCCAACTGACTTGCTTAATGCAGATGCTGATGCTCATCACAGAATTAGAACACATATATTTTATAGATTCTTTAAGCCTAAGTTTACAGTGAATGTTTGTCAACAAAGAGATATCAGATCTGATCGTCTTGGTAACATGCCTGTGATGGAGCAACAACTCAACAGAGAATGCAGCTTGTTTACTGAAGATGGTAGATATGTAATAGTGGGATCTGCAGCACATATTCCAGATGACTTGAGACCACATTTTTATCACATTCACAGTAACAATGAAGCTGTCACGCCTACAATAAGGTCCCCTTTGGAAGATTATTCACTTCATTTAGTTGACCTACATCAAGGGAAACTTTGTGATACTAAACATTTTAGAATCGACAAAATTTACCTATCACACAATCAAGGAATGTTGATTGAAATTAGAAAAATTGGACGGTATTGTTATGACGATGACCCGTTTATAGTCAGTTCAATAATAGGCAAATCCATAAATGAGAAACCATTTCACGAAGAAACAATTAATAGTTTAAAACACAGGATACTTGTATTTTTGTTTAAGAGAGCTAAAAAAATCACCGACGAGACTGGTGATCCTTTGGAGTTACGAAAGTTTTACAAGTACTTCGATATGTTTAAAAGTTTGAGAATGTGGAAGATGCAACTGTTAGATGAAGATCATTTATTTATAAAATACGCAAGCGAAGAGGTTGTGACTCTTAGGGTGGCTGAACCCAACAGTCAGTCATCATTCTTTGTCATATACAACATAAGCCAGAGTAAAGTGTTGGAAATATACGAGAACACGTCCGAAGCGCTTTTGCAACTTTTCGAAAACTACTGTGATTGTTTTAGAAATGCGAGACTGTGTGCAGATTCGCAGTTCACTTGCTCGCCATCAAATAATTTATACGCCAGGTTGACACAACAAAGGTTTAAACAGACTATAGTTAGAGCGATATATGGAGGACGTACTGAAGCAACTAAAAGAATTTTAGCGCAATTACCGATCAGCGCGCAGTCGTATAGTGGATCTCCGTATTTAGATTTAGGTCTCTTCAGCTACGACGATAAATGGGTATCTGTGATGGAGAGACCTAAGGCCTACGGAGAATATCCCATAAGATTCTATGCAAGGGATTCGGGGCTATTGAAATTTAAAATATATGCAGGGGTTTTAGGACAATCTGTGCCTCCCAGTGCTCGAAGACTAGTAGCTTTCACATTCCATCCAACAGATCCTTTTGCTATTAGCTGTCTGTTATCTTACAATAATATAATAGGGGAAGGCGATGTCGTTGCCATAGTGTCTTCAGGGGGTGTTCTTCAGTATTTCTTCACACCAGTCACCCACGGTATACACTGTCCAACCAACGCACCTTATGGGTTACCTTATTGGAATGCAAATAAACCCCTGTGGTTCGTACGCAGTATTGGGGATCCATTTCATATCCAACCATATCCTAATTCGCCAGAAGGCGTTATTTTTAATCGATACAATATTATATCGGATAGTCAACCCGTCCAACCATTTGATTTAAAGTTTCACAATGATCGTTGGACGTCAACGACTGATTTACATTATTTTTATCCGTCGATACGTCAATACAATTGGTTTCCAAGTGGATTAAGCAAAGGCAGTGCAGCAGTTCAAGTGGAAATGCCAAGTTTAACCAACAATGTATGTCATTACGAGATTGTTTGTAACTGTGGAGTCAAAAGAACAAAATTAAATTGTAATTGTCGTGATGACGCAAGTGCTATGTCTATTGATGAGACAGTTTCGAAACCTGCAGCAAAAACTCATAAGAATGAAACTAATGAGCCCTCTTCATTGACCGTTATTAAAAGAAACGTTATTTGTGAATGTAACAAGTCTGACATAGCTGAAAGATCGGCCTCAACATATTCTGAACAAGCCGCTGTCGGAAGTCAAACGCCAACTAAGCCTAAAAACAAAAGTACTTCTATTAAGAAAACTAAAAACGAAAAGACGTGTCCGAAACGCCGCTACAAGGGACGGGCTCCCTCTAAATCATATGATACGACTAGTGACAGTTCCCAAAGCTGCAACTGCAATAGTGAAACCGAATAA
Protein
MEREIHGSRKPGSHFHVVREFYQNVFPNLTIVNVEKPPCFLRKFSPDGKHFIAFSADQTSLEIYEYRGASSAGDLVAGYPTDLLNADADAHHRIRTHIFYRFFKPKFTVNVCQQRDIRSDRLGNMPVMEQQLNRECSLFTEDGRYVIVGSAAHIPDDLRPHFYHIHSNNEAVTPTIRSPLEDYSLHLVDLHQGKLCDTKHFRIDKIYLSHNQGMLIEIRKIGRYCYDDDPFIVSSIIGKSINEKPFHEETINSLKHRILVFLFKRAKKITDETGDPLELRKFYKYFDMFKSLRMWKMQLLDEDHLFIKYASEEVVTLRVAEPNSQSSFFVIYNISQSKVLEIYENTSEALLQLFENYCDCFRNARLCADSQFTCSPSNNLYARLTQQRFKQTIVRAIYGGRTEATKRILAQLPISAQSYSGSPYLDLGLFSYDDKWVSVMERPKAYGEYPIRFYARDSGLLKFKIYAGVLGQSVPPSARRLVAFTFHPTDPFAISCLLSYNNIIGEGDVVAIVSSGGVLQYFFTPVTHGIHCPTNAPYGLPYWNANKPLWFVRSIGDPFHIQPYPNSPEGVIFNRYNIISDSQPVQPFDLKFHNDRWTSTTDLHYFYPSIRQYNWFPSGLSKGSAAVQVEMPSLTNNVCHYEIVCNCGVKRTKLNCNCRDDASAMSIDETVSKPAAKTHKNETNEPSSLTVIKRNVICECNKSDIAERSASTYSEQAAVGSQTPTKPKNKSTSIKKTKNEKTCPKRRYKGRAPSKSYDTTSDSSQSCNCNSETE

Summary

Pfam
PF09737   Det1
Interpro
IPR019138   De-etiolated_protein_1_Det1       

Ontologies

GO

Topology

Length:
774
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00637
Exp number, first 60 AAs:
0.00103
Total prob of N-in:
0.00031
outside
1  -  774
 
 

Population Genetic Test Statistics

Pi
261.88834
Theta
176.717843
Tajima's D
0.901701
CLR
1.530467
CSRT
0.635568221588921
Interpretation
Uncertain
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