SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12603
Pre Gene Modal
BGIBMGA001428
Annotation
PREDICTED:_ADAM_17-like_protease_[Bombyx_mori]
Full name
ADAM 17-like protease      
Location in the cell
Nuclear   Reliability : 2.262
 

Sequence

CDS
ATGAAGATATTCGTACTACCTGTATTAACAATTTTGTTTGTTTTAGGACATTGTTCTATACACCATAATTTGAAATATTTTGAGACAATACACGCGTCGAGTTTGTCCCATAGTATTGTCAAGCGTGGTGCAAAACTTTCTAATCATCCCTATAATACGATAAAGGAGGTTCGCTTCAAGACCTTGGGAAAAGACTTTCGATTGATATTACACCCTCAGAGTTCTGTTTTGCATTCCAATTTTAAAGCCTACTCTGTTGATGCTGATGGTAAAGAGACTACTGTGCATGTTGATCGTGAGAATTTCTTCACTGGCAGAGTATTTGGAGAAACAAAATCAGATGTTAAGTTACATATGGAAGATGGTGTAATGACAGGAATCATACATACACCTGATGAAACATATCATGTGGAGCCGTCCTGGCGACATCTGCCTGATTTAGATGGGAAGAGCATGATCACTTATCGTTCTTCTGATATTCGGTACAGTTGGGCTGGTGATGCAATTCCCAACAAACCACGGGTTTGTGGTTATGTTAAAGAGGGAAAAGAATTGGAAGACGACAGTGATGATGTACAAGAAGAATATGATATCGAATTGAAGCATGAACAGCTTGAAAAAGAAAAGTATTTGGACCAAACAAACTCATACCATCCAGCTAATGAAGCTGACACAAGTAATGATGGTCCTAAAAAGAGGACTAAGAGACAGAGTGATTATGAATATACACCAACAAAAACAAGATGTCCCCTATTACTTGTGGCTGACTATAGATTCTTTCAAGAAATGGGAGCTAGCAACACCAAAACTACCATTAGTTATTTGATAAGTCTAATTGATCGTGTGCATAAAATTTATAATGATACTCTGTGGCAGGATAGGCAGGATATGGATGGATTTAAAGGCATGGGGTTTGTAATTAAAAAGATATTGGTACATTCTGAACCTACACGAGTCCGAGGAGGAGAGGCTCATTATAATATGGTGCGTGAGAAATGGGATGTTCGGAATTTGCTTGAGGTGTTCAGTCGAGAATATTCACACAAAGACTTCTGTTTGGCTCACTTATTTACTGACCTTAAATTCGAAGGCGGCATCTTAGGTTTAGCCTATGTCGGTTCGCCGCGTAGAAATTCAGTCGGTGGTATATGCACCCCAGAATATTTCAAGAACGGATATACGTTATATTTGAACTCTGGCCTGAGTTCGTCCCGGAATCATTACGGGCAGCGCGTGATCACCCGGGAGGCGGACCTGGTGACGGCGCACGAGTTCGGCCACAACTGGGGCTCCGAGCACGACCCCGACGTGGCCGAGTGCTCGCCGGCCGCCAGCCAGGGGGGCTCCTACCTCATGTACACCTACAGCGTCAGCGGGTACGACGTCAACAACAAGAGATTTTCACCGTGCAGCCTAAGATCTATCAGAAAAGTGTTGCAGGCCAAATCTGGCAGATGTTTCTCTGAACCGGAGGAGAGTTTTTGTGGAAATCTTCGTGTCGAAGGAGGAGAGGAATGCGACGCTGGCCTGCTTGGTACTGAAGACAATGATATGTGCTGCGATAAGAATTGTAAATTGAGAAAAAATCAAGGCGCTGTCTGCAGCGACAAGAACTCCCCGTGCTGCGCCGGCTGTGTATTCGCGCCGCCCGGGCTCGTGTGCCGCGAGGCCGCGCACTCCGCCTGCGAGGGGGAGGCCATCTGCAACGGAGCCTCCGCCGACTGCCCCAAGGCGCCCGCCATCGCGGACGAGCACGAGTGCGCGGAGCGGGGCCGGTGCCGCAACGGCACGTGCATGCCGTACTGCGAGACGCAGGGGATGCACAGCTGCATGTGCGATATAGTCGCCGATGCCTGTAAACGTTGCTGCCGAAAGAGTTTAAACAAAACATGTTTTCCAGTCGCCCATAACGATATTTTGCCCGATGGAACTCCTTGTATACAAGGTTTTTGCAATAAGGGAGTATGTGAGAAGACAATACAAGACGTGGTCGAACGTTTCTGGGACATCATAGAGGACATTAACATAAACAATGTGCTGGGCTTCCTCCGGGACAACATCGTGGGAGTGGTCGTACTCGTCACTGCCTTCATATGGATACCTGCCAGTTGTGTTATTAGCTATGTTGATCGTCGACGTCAGCGTCAGCATCAGAAGTATTTGGAGTGGGAGAGGCAACATGATCTGATTCATCCGTCGTCACCGAGAAAAGTTATACACACACGATTACCGAAACAGAAACCTCCGGGAATTAAATCTGCCATACAAGGCAGCAGTCAACTGTAG
Protein
MKIFVLPVLTILFVLGHCSIHHNLKYFETIHASSLSHSIVKRGAKLSNHPYNTIKEVRFKTLGKDFRLILHPQSSVLHSNFKAYSVDADGKETTVHVDRENFFTGRVFGETKSDVKLHMEDGVMTGIIHTPDETYHVEPSWRHLPDLDGKSMITYRSSDIRYSWAGDAIPNKPRVCGYVKEGKELEDDSDDVQEEYDIELKHEQLEKEKYLDQTNSYHPANEADTSNDGPKKRTKRQSDYEYTPTKTRCPLLLVADYRFFQEMGASNTKTTISYLISLIDRVHKIYNDTLWQDRQDMDGFKGMGFVIKKILVHSEPTRVRGGEAHYNMVREKWDVRNLLEVFSREYSHKDFCLAHLFTDLKFEGGILGLAYVGSPRRNSVGGICTPEYFKNGYTLYLNSGLSSSRNHYGQRVITREADLVTAHEFGHNWGSEHDPDVAECSPAASQGGSYLMYTYSVSGYDVNNKRFSPCSLRSIRKVLQAKSGRCFSEPEESFCGNLRVEGGEECDAGLLGTEDNDMCCDKNCKLRKNQGAVCSDKNSPCCAGCVFAPPGLVCREAAHSACEGEAICNGASADCPKAPAIADEHECAERGRCRNGTCMPYCETQGMHSCMCDIVADACKRCCRKSLNKTCFPVAHNDILPDGTPCIQGFCNKGVCEKTIQDVVERFWDIIEDININNVLGFLRDNIVGVVVLVTAFIWIPASCVISYVDRRRQRQHQKYLEWERQHDLIHPSSPRKVIHTRLPKQKPPGIKSAIQGSSQL

Summary

Cofactor
Zn(2+)
Keywords
Alternative splicing   Cleavage on pair of basic residues   Complete proteome   Disulfide bond   Glycoprotein   Hydrolase   Membrane   Metal-binding   Metalloprotease   Protease   Reference proteome   Signal   Transmembrane   Transmembrane helix   Zinc   Zymogen  
Feature
chain  ADAM 17-like protease
splice variant  In isoform B.
EC Number
3.4.24.-
EMBL
NWSH01000780    PCG74284.1    ODYU01001967    SOQ38888.1    AGBW02012992    OWR44118.1    + More
KQ459193    KPJ03069.1    AAAB01008859    EAA08066.5    APCN01000423    AXCM01000066    ATLV01019399    KE525269    KFB44125.1    BABH01006334    BABH01006335    BABH01006336    BABH01006337    BABH01006338    BABH01006339    BABH01006340    BABH01006341    AXCN02000218    ADMH02000650    ETN65446.1    GAMC01001243    JAC05313.1    CH477285    EAT44750.1    JXJN01004199    JXJN01004200    GAKP01012681    GAKP01012664    JAC46271.1    JRES01000835    KNC27901.1    GDHF01007530    JAI44784.1    UFQS01000097    UFQT01000097    SSW99408.1    SSX19788.1    GBXI01013106    JAD01186.1    GDHF01019781    GDHF01017123    JAI32533.1    JAI35191.1    CM000160    EDW99039.1    CH480819    EDW53453.1    AY212802    AY525768    AE014297    AY061030    BT003184    AJWK01026149    CH954182    EDV53136.1    CH902617    EDV44082.1    OUUW01000005    SPP80930.1    CM000070    EDY67486.2    KQ977771    KYM99996.1    GL888056    EGI68627.1    NEVH01002990    PNF41049.1    ADTU01023838    GEZM01087879    JAV58424.1    KQ980970    KYN10938.1    KZ288292    PBC29147.1    CVRI01000006    CRK87999.1    CH916373    EDV94632.1    GEDC01015691    JAS21607.1    CH933806    EDW16914.1    CH964272    EDW84017.1    CP012526    ALC46532.1    KQ414596    KOC69965.1    KQ981522    KYN40576.1    CH940656    EDW58380.2    NNAY01000791    OXU26488.1    GEZM01087880    JAV58423.1    KQ436008    KOX67619.1    CCAG010012590    ACPB03009762    KK107390    QOIP01000007    EZA51424.1    RLU20425.1    DS231916    EDS26112.1    GL449017    EFN83481.1    CH479186    EDW39294.1    GL765283    EFZ16703.1    SSW99409.1    SSX19789.1    GL435586    EFN73100.1    KB632399    ERL94730.1    AJVK01021750    AJVK01021751    KQ971312    EEZ98535.2    GEDC01006926    JAS30372.1    GEBQ01019180    JAT20797.1    KK853016    KDR12487.1    ABLF02022098    ABLF02022102    GBHO01025349    GBHO01025348    JAG18255.1    JAG18256.1    GFTR01007821    JAW08605.1    DS235002    EEB10207.1    JXUM01135890    KQ568348    KXJ69034.1    APGK01039066    KB740967    ENN76784.1    SSW99410.1    SSX19790.1    HACA01009606    CDW26967.1    GL732533    EFX84833.1    GDIQ01246047    GDIQ01138927    GDIQ01120681    JAL12799.1    QCYY01000856    ROT82229.1    GDIQ01056301    JAN38436.1    GDIQ01224937    JAK26788.1    GECL01000880    JAP05244.1    GDIP01146279    JAJ77123.1    LRGB01000220    KZS20319.1    GDIQ01212637    JAK39088.1    GDIQ01056360    JAN38377.1    GDIQ01061154    JAN33583.1   
Pfam
PF00200   Disintegrin        + More
PF16698   ADAM17_MPD
PF01562   Pep_M12B_propep
PF06423   GWT1
Interpro
IPR001590   Peptidase_M12B        + More
IPR024079   MetalloPept_cat_dom_sf       
IPR001762   Disintegrin_dom       
IPR002870   Peptidase_M12B_N       
IPR034025   ADAM10_ADAM17       
IPR036436   Disintegrin_dom_sf       
IPR032029   ADAM17_MPD       
IPR009447   PIGW/GWT1       
SUPFAM
SSF57552   SSF57552       
Gene 3D
PDB
3G42     E-value=1.75529e-71,     Score=687

Ontologies

Topology

Subcellular location
Membrane  
SignalP
Position:   1 - 18,         Likelihood:  0.961555
 
 
Length:
761
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
24.64556
Exp number, first 60 AAs:
1.8368
Total prob of N-in:
0.09363
outside
1  -  686
TMhelix
687  -  709
inside
710  -  761
 
 

Population Genetic Test Statistics

Pi
310.781805
Theta
171.492806
Tajima's D
3.260882
CLR
0.297325
CSRT
0.989050547472626
Interpretation
Uncertain
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