Gene

KWMTBOMO12601  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001546

Annotation

PREDICTED:_dynein_heavy_chain?_cytoplasmic_[Amyelois_transitella]

Location

Bomo_Chr21(+):9070220-9080054      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.058 Nuclear   Reliability : 2.117

CDS

ATGGGAGACTCCCTTGACGGGACTGAAAATACTGCAGAAACCCAAAATGTGGTTGTTGTTGATTTTCAAGACTTTGCTAATTACTTGCGAAGAGCCGCAACGGTACTTTTGCCTGAGGATGACATCGTTCCTCCGGCTCTTAACACAGCCCTCGAGGATAAAGTGAACCAAGACTGCATTAGAAAGTTTATTGCTGATCCTCAAGTTTCTTCGCTCTACGTCCAACGATTTTCATCAAAAGAAGATGACAGTGAACAACCAACTGAGGGTGAAGAAGAGAAAGAAGCTGTTACATACCAAATCAGCAATGAGGTTCATTTTACATCCCCACGAGTGGCTGCCCTTGTCTGTACAAAACGAGGAGCAGTTATTGAAGCTGATAAGTCCATCCATAGTCAACTTCGATTAATCAACTTCTCTGATGGATCTCCTTATGAAACCCTGCATGCTTTTATCAGCAAAACAATGGCTCCATTTTTCAAGAGCTATGTTAAAGAAAGTGGAAGAGCTGACCGAGATGGTGATAAAATGGCTCCATCAGTTGAGAAGAAAATAGCTGAACTGGAAATGGGTCTTCTTCATCTCCAACAGAACATTGATATTCCTGAAATTACTCTACCCATCCATCCAGTTGTGGCAGCAGTCATAAAAAGGGCTGCTGATGAAGGAAGGAAAGCCCGAGTTGCGGACTTTGGTGACAAAGTTGAAGATTCTACTTTTTTAAATCAACTTCAGTTTGGTGTTAATCGTTGGATTAAAGAAATTCAAAAGGTGACCAAATTGGATCGAGATCCTTCAAATGGTACTGCACTTCAAGAAATCTCTTTCTGGTTGAATCTTGAAAGAGCTCTCCATCGCATTCAAGAAAAACGAGAAAGTCTTGAAGTGGCACTAACTCTCGAGATCCTGAAATATGGTAAACGTTTCCATGCAACTGTCTCATTCGATACAGACACAGGCCTGAAGCAAGCTCTTGCAACTGTATCTGATTACAATCCATTGATGAAAGATTTCCCCATCAATGACCTTTTGAGTGCTACTGAACTTGACAGAATAAGGTTGGCAGTCCAACAAATATTCTCTCATCTACGTAAAATACGTTCTACTAAGTATCCAATCCAGCGTGGTCTAAGACTTGTTGAAGCAATTTCTCGTGATCTCGGGCAACAGCTATTAAAGGTGCTTGGTACTCGTCGTCTGATGCACATTCCATTTGAAGACTTCGAACGCGTCATGACTCAATGTTTTGAAGTATTTTCGTGTTGGGATGATGAGTACGAGAAGCTTCAAGGTCTTCTTCGTGACATCGTGAAGAAGAAACGCGATGAACATTTGAAGATGGTATGGCGCGTTTCTCCGTCACATAAGCGACTGCAGGCGCGCATGGAACACATGCGGCGCTTCCGGAGACATCACGAGCAACTGCGCACTGTCATGCTAAGAGTTCTGCGTCCACGCGCTGTAGTGACTGCAGAGACGGGTGCTTCAGGCGAACCCGCGCAGCCTCACTCTCTGCCCATGGATGCTGCTGATGCTAACGCCATTGCCGAGGTGAACCTCGCATATGAGAATGTGAAAGAAGTCGATTGCTTAGATATCACCCGCGAAGGTTGCGACGCTTGGGAAGCTGCCGTGGGACGCTATGAAGACAGAATCGGTATGTCAAACAACATGTACCAAATTTTTGGCGAATTTTAA

Protein

MGDSLDGTENTAETQNVVVVDFQDFANYLRRAATVLLPEDDIVPPALNTALEDKVNQDCIRKFIADPQVSSLYVQRFSSKEDDSEQPTEGEEEKEAVTYQISNEVHFTSPRVAALVCTKRGAVIEADKSIHSQLRLINFSDGSPYETLHAFISKTMAPFFKSYVKESGRADRDGDKMAPSVEKKIAELEMGLLHLQQNIDIPEITLPIHPVVAAVIKRAADEGRKARVADFGDKVEDSTFLNQLQFGVNRWIKEIQKVTKLDRDPSNGTALQEISFWLNLERALHRIQEKRESLEVALTLEILKYGKRFHATVSFDTDTGLKQALATVSDYNPLMKDFPINDLLSATELDRIRLAVQQIFSHLRKIRSTKYPIQRGLRLVEAISRDLGQQLLKVLGTRRLMHIPFEDFERVMTQCFEVFSCWDDEYEKLQGLLRDIVKKKRDEHLKMVWRVSPSHKRLQARMEHMRRFRRHHEQLRTVMLRVLRPRAVVTAETGASGEPAQPHSLPMDAADANAIAEVNLAYENVKEVDCLDITREGCDAWEAAVGRYEDRIGMSNNMYQIFGEF

Uniprot

A0A2H1VZ37   A0A2A4JQC4   A0A2A4JQF3   A0A2A4JR67   A0A437BV09   A0A194Q0A3   + More
A0A194RTF1   A0A212ERI5   A0A1E1WVJ4   A0A1I8MAA1   A0A067RE92   A0A0P8YFV9   A0A0N8P0Q9   A0A1I8MAA2   A0A0P9C2B8   A0A0P8ZTH2   A0A0P8XT95   A0A0P8Y8P3   A0A0P8XSV6   B3M9K7   A0A1I8MAA0   A0A1I8MA98   A0A0Q9XAT4   B4KXB9   A0A0Q9XIF9   A0A0Q9XNC6   A0A0Q9XB28   A0A0Q9XD89   A0A0Q9XMN8   A0A0Q9XAS1   B4IZ64   A0A0Q9WBN2   B4MG05   A0A0L0BM54   B4H1Q5   A0A1I8QCB9   A0A1I8QC73   A0A1I8QC67   A0A1I8QC96   A0A1I8QC60   A0A1I8QC72   A0A1I8QC89   A0A1I8QCB2   A0A1W4VNK0   A0A1W4VNK4   A0A2J7RK39   A0A1W4VMW0   A0A0R3P6D1   A0A0R3P6A2   A0A0R3P8Q7   A0A0R3P954   Q29EA0   A0A0R3P6P6   A0A0R3P8I2   A0A1W4VAG7   A0A1W4VMW5   A0A1W4VA61   A0A1W4VA56   W8ACB3   A0A0R3P6B2   A0A1W4VAH2   W8B6W3   A0A0K8UTN6   B4HUB1   A0A034V4J1   A0A2J7RK22   A0A0J9RQP0   A0A0R1DXJ6   A0A0J9RPM6   A0A0J9RP14   A0A0J9RPM1   A0A3B0JV19   A0A0R1DVS5   A0A0R1DVY0   A0A2J7RK29   A0A0Q5U3E4   A0A0Q5UA82   A0A0J9RP89   A0A0J9UEU2   A0A0J9UET5   A0A0J9RP19   A0A0K8V9A6   Q1EBX0   A0A0R1DVX0   B4PIC0   A0A0R1DVP1   A0A0R1E115   A0A0R1DVP0   A0A2J7RK19   A0A0Q5U5Z8   A0A0Q5UIB9   A0A0Q5U4G1   A0A0Q5UI89   B3NG67   A0A1A9WLE6   A0A0Q5U433   A0A0K8U771   A0A0K8UKF3   A0A0A1X7P3   A0A0K8V4V1  

Pubmed

26354079    22118469    25315136    24845553    17994087    26108605    + More
15632085    24495485    25348373    22936249    17550304    25830018   

EMBL

ODYU01005349    SOQ46105.1    NWSH01000780    PCG74265.1    PCG74267.1    PCG74266.1    + More
RSAL01000006    RVE54307.1    KQ459585    KPI98424.1    KQ459896    KPJ19396.1    AGBW02012992    OWR44116.1    GDQN01000077    JAT90977.1    KK852559    KDR21358.1    CH902618    KPU77811.1    KPU77812.1    KPU77813.1    KPU77814.1    KPU77810.1    KPU77815.1    KPU77809.1    EDV39013.1    CH933809    KRG05627.1    EDW17577.1    KRG05626.1    KRG05624.1    KRG05628.1    KRG05625.1    KRG05623.1    KRG05622.1    CH916366    EDV95586.1    CH940669    KRF78206.1    EDW58266.2    JRES01001653    KNC21131.1    CH479203    EDW30257.1    NEVH01002981    PNF41190.1    CH379070    KRT08684.1    KRT08689.1    KRT08685.1    KRT08688.1    EAL30161.1    KRT08686.1    KRT08687.1    GAMC01021040    JAB85515.1    KRT08690.1    GAMC01021041    JAB85514.1    GDHF01022441    JAI29873.1    CH480817    EDW50532.1    GAKP01022469    JAC36483.1    PNF41186.1    CM002912    KMY97679.1    CM000159    KRK01214.1    KMY97682.1    KMY97676.1    KMY97677.1    OUUW01000002    SPP77559.1    KRK01212.1    KRK01209.1    PNF41187.1    CH954178    KQS43608.1    KQS43613.1    KMY97678.1    KMY97680.1    KMY97675.1    KMY97681.1    GDHF01016765    JAI35549.1    BT025964    ABG02208.1    KRK01213.1    EDW93462.1    KRK01208.1    KRK01210.1    KRK01211.1    PNF41185.1    KQS43612.1    KQS43607.1    KQS43609.1    KQS43610.1    EDV50968.1    KQS43611.1    GDHF01030119    JAI22195.1    GDHF01025278    JAI27036.1    GBXI01007589    JAD06703.1    GDHF01018561    JAI33753.1   

Proteomes

UP000218220    UP000283053    UP000053268    UP000053240    UP000007151    UP000095301    + More
UP000027135    UP000007801    UP000009192    UP000001070    UP000008792    UP000037069    UP000008744    UP000095300    UP000192221    UP000235965    UP000001819    UP000001292    UP000002282    UP000268350    UP000008711    UP000091820   

PRIDE

Q1EBX0   

Pfam

PF08393   DHC_N2        + More
PF12774   AAA_6
PF08385   DHC_N1
PF17852   Dynein_AAA_lid
PF12780   AAA_8
PF12777   MT
PF12781   AAA_9
PF03028   Dynein_heavy
PF18198   AAA_lid_11
PF18199   Dynein_C

Interpro

IPR026983   DHC_fam        + More
IPR013602   Dynein_heavy_dom-2       
IPR013594   Dynein_heavy_dom-1       
IPR041466   Dynein_AAA5_ext       
IPR003593   AAA+_ATPase       
IPR042228   Dynein_2_C       
IPR035699   AAA_6       
IPR042222   Dynein_2_N       
IPR027417   P-loop_NTPase       
IPR024743   Dynein_HC_stalk       
IPR024317   Dynein_heavy_chain_D4_dom       
IPR035706   AAA_9       
IPR042219   AAA_lid_11_sf       
IPR004273   Dynein_heavy_D6_P-loop       
IPR041658   AAA_lid_11       
IPR041228   Dynein_C       

SUPFAM

SSF52540   SSF52540       

Gene 3D

1.20.140.100     3.20.180.20     1.10.8.720    

ProteinModelPortal

A0A2H1VZ37   A0A2A4JQC4   A0A2A4JQF3   A0A2A4JR67   A0A437BV09   A0A194Q0A3   + More
A0A194RTF1   A0A212ERI5   A0A1E1WVJ4   A0A1I8MAA1   A0A067RE92   A0A0P8YFV9   A0A0N8P0Q9   A0A1I8MAA2   A0A0P9C2B8   A0A0P8ZTH2   A0A0P8XT95   A0A0P8Y8P3   A0A0P8XSV6   B3M9K7   A0A1I8MAA0   A0A1I8MA98   A0A0Q9XAT4   B4KXB9   A0A0Q9XIF9   A0A0Q9XNC6   A0A0Q9XB28   A0A0Q9XD89   A0A0Q9XMN8   A0A0Q9XAS1   B4IZ64   A0A0Q9WBN2   B4MG05   A0A0L0BM54   B4H1Q5   A0A1I8QCB9   A0A1I8QC73   A0A1I8QC67   A0A1I8QC96   A0A1I8QC60   A0A1I8QC72   A0A1I8QC89   A0A1I8QCB2   A0A1W4VNK0   A0A1W4VNK4   A0A2J7RK39   A0A1W4VMW0   A0A0R3P6D1   A0A0R3P6A2   A0A0R3P8Q7   A0A0R3P954   Q29EA0   A0A0R3P6P6   A0A0R3P8I2   A0A1W4VAG7   A0A1W4VMW5   A0A1W4VA61   A0A1W4VA56   W8ACB3   A0A0R3P6B2   A0A1W4VAH2   W8B6W3   A0A0K8UTN6   B4HUB1   A0A034V4J1   A0A2J7RK22   A0A0J9RQP0   A0A0R1DXJ6   A0A0J9RPM6   A0A0J9RP14   A0A0J9RPM1   A0A3B0JV19   A0A0R1DVS5   A0A0R1DVY0   A0A2J7RK29   A0A0Q5U3E4   A0A0Q5UA82   A0A0J9RP89   A0A0J9UEU2   A0A0J9UET5   A0A0J9RP19   A0A0K8V9A6   Q1EBX0   A0A0R1DVX0   B4PIC0   A0A0R1DVP1   A0A0R1E115   A0A0R1DVP0   A0A2J7RK19   A0A0Q5U5Z8   A0A0Q5UIB9   A0A0Q5U4G1   A0A0Q5UI89   B3NG67   A0A1A9WLE6   A0A0Q5U433   A0A0K8U771   A0A0K8UKF3   A0A0A1X7P3   A0A0K8V4V1  

PDB

5NUG     E-value=0,     Score=1696

KEGG

105842135    K10413 dynein heavy chain 1, cytosolic | (RefSeq) dynein heavy chain, cytoplasmic-like

PATHWAY

04145    Phagosome - Bombyx mori (domestic silkworm)

GO

GO:0007018   GO:0005524   GO:0003777   GO:0030286   GO:0016887  

PANTHER

PTHR10676  

Length:

565

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00016

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00055

outside

1  -  565

 

 

Pi

285.328047

Theta

169.586809

Tajima's D

3.163491

CLR

0.561736

CSRT

0.985300734963252

Interpretation

Uncertain