SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12596
Pre Gene Modal
BGIBMGA001544
Annotation
PREDICTED:_uncharacterized_protein_LOC101739466_[Bombyx_mori]
Full name
Odorant receptor      
Location in the cell
PlasmaMembrane   Reliability : 4.226
 

Sequence

CDS
ATGAACAAGAATCACTACATCTTGAAGACGTACTGCGATAAAATCTTTTTGGTCGGCTCCGGAAACTTTTGGTATCAAAAAACGGAATCTAGAAATGACAAAACACTGCTTTACAAAATTTATAGCTGCGTTTTGTTTTTTACGTATGGCTTCATGACGGTGCTGGAGATCATGGCGGCGACGATGGGCGATTTCCCGGATGACGAAAAACGGGACTCCGTGACGTTTGCCTCAAGCCACACCCTTATTATGATTAAATTTATTTCCATAATAAAAAACAAAGAGCTATTGAAAACGCTGAATCGTAAGATGATGATGATTTGCGAGGCTCACGAGGAACAAACGCTGATGGACGAGATGTATCGGATTGTGAAAATAAATGTTGTCGCTTATTGTGTCGCGGTTTATGGTTCAGTCACGTTTTTCGTGTTTGAAGGTTTGAGGAAATTTTATGACGGTTCTCACTTCGTCACAATAGTCACATATTACCCATCTAAGGATGACGATACAATGCTGGCAAGTATTTTCCGAATTGCCACCACACTAGTCTTACTGGTGATGATGCTGTCTATGATTATATCAGTTGATACGTACACAATGGCGTATTTAATAATGTACAAATATAAATTCATAACGTTGAGGCACTATTTCAAAAGATTAAGGGAGAATGTAGATGAGCTTGTAGCGGCTGGGAAGGCGAGATTGGCTGCTGAGAAATTGGCTCAAGGACTTGTCGAGGGTATCAAGATGCATAATGAATTGTTAAGTTTATCAAAAGACATCCACAAAGCTTTCGGGACAGTAATGGCGTTACAGCTCTGTCAGAGTTCGGGCTCGGCGGTCTCGCTACTACTTCAAATTGCCAGGGATAGCGTTATTTGCCTTGAAAATGTTAACGTCGTTTCCTTAGAGATTTTTGCTTGCGCGATAGAAACTGGCAAAATCGTTCCGTTCGTTATTTATGTTCAGAAATTTATCAAGATAAAAACGATTTCATGA
Protein
MNKNHYILKTYCDKIFLVGSGNFWYQKTESRNDKTLLYKIYSCVLFFTYGFMTVLEIMAATMGDFPDDEKRDSVTFASSHTLIMIKFISIIKNKELLKTLNRKMMMICEAHEEQTLMDEMYRIVKINVVAYCVAVYGSVTFFVFEGLRKFYDGSHFVTIVTYYPSKDDDTMLASIFRIATTLVLLVMMLSMIISVDTYTMAYLIMYKYKFITLRHYFKRLRENVDELVAAGKARLAAEKLAQGLVEGIKMHNELLSLSKDIHKAFGTVMALQLCQSSGSAVSLLLQIARDSVICLENVNVVSLEIFACAIETGKIVPFVIYVQKFIKIKTIS

Summary

Similarity
Belongs to the insect chemoreceptor superfamily. Heteromeric odorant receptor channel (TC 1.A.69) family.
EMBL
BK005930    DAA05980.1    AB472102    BAH66319.1    BK005929    DAA05979.1    + More
AB472101    BAH66318.1    BABH01006301    ODYU01003551    SOQ42466.1    LN885121    CUQ99410.1    KR935718    ALM26210.1    KY707191    AVF19633.1    JTDY01005763    KOB66659.1    KX585348    ARO70241.1    KX655966    AOG12915.1    LC002730    BAR43478.1    RSAL01000006    RVE54303.1    KY399270    AQQ73501.1    KX084486    ARO76441.1    MG546646    AYD42269.1    KM597197    AIT69874.1    KM655533    AIT71983.1    KM892371    AJF23786.1    LC002734    BAR43482.1    MG816582    AXF48767.1    KM678297    AJE25870.1    KY283651    AST36310.1    JN836687    AFC91727.1    KY283729    AST36388.1    AJ748334    CAG38120.1    KX655959    AOG12908.1    ODYU01002730    SOQ40594.1    AB472091    BAH66308.1    JTDY01005831    KOB66567.1    NWSH01000145    PCG79093.1    RVE54305.1    AGBW02008859    OWR52357.1    KJ542660    AJD81544.1    KY399261    AQQ73492.1    NWSH01002695    PCG67665.1    AB472098    BAH66315.1    KX655957    AOG12906.1    KZ150436    PZC70875.1    KX084495    ARO76450.1    GEDO01000025    JAP88601.1    KM678321    AJE25894.1    KM892395    AJF23810.1    RSAL01000080    RVE48662.1    KX084488    ARO76443.1    GEDO01000059    JAP88567.1    KM655559    AIT72008.1    KY283757    AST36416.1    GCVX01000207    JAI18023.1    KM597221    AIT69898.1    KF487693    AII01091.1    KY825770    ARF06964.1    NWSH01002810    PCG67496.1    KF768702    AIG51896.1    JN836702    AFC91742.1    KM597231    AIT69908.1    KF487679    AII01077.1    MG816620    AXF48805.1    KM892399    AJF23814.1    MF625594    AXY83421.1    MF625587    AXY83414.1    AB234349    BAF31189.1   
Pfam
PF02949   7tm_6
Interpro
IPR004117   7tm6_olfct_rcpt       

Ontologies

Topology

Subcellular location
Cell membrane  
Length:
332
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
92.6465500000002
Exp number, first 60 AAs:
21.76275
Total prob of N-in:
0.99641
POSSIBLE N-term signal
sequence
inside
1  -  36
TMhelix
37  -  59
outside
60  -  73
TMhelix
74  -  91
inside
92  -  125
TMhelix
126  -  148
outside
149  -  172
TMhelix
173  -  195
inside
196  -  332
 
 

Population Genetic Test Statistics

Pi
194.718294
Theta
157.225359
Tajima's D
0.839221
CLR
0.406959
CSRT
0.612169391530423
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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