SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12591
Annotation
PREDICTED:_uncharacterized_protein_LOC106119284?_partial_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 1.883
 

Sequence

CDS
ATGATTATGAGGTTGTGCGGCTGCGTCCCACATTTCTATAAAAAAATAGAAAACGAAAGAATATGCAGCCTACCTGAACTGAGATGCATTGTTCTTTACAAAAGAGAGATCACCACTCTAACAGCTTCAAACGAAACATTGCAAAGGTTTAACGATTATACCGATTTACCGAGAAGGTCACGCGACTGCGGATGTTTAGGTGATTGCGAAGCCGACGTCTACCAGCAAGATCCCGCGTCACTTTTGCCTCAAGAGTCATTGAACAGATTAAGGATCAGTGTCACGTCCTTTCCGAAAGTGAGATTTATGAGGGAAATTATGTTCAGTACTTATGACATTATACTACGGAGTGGCGGTATCGTGAACTTGTGTATCGGCACTTCGTTTATATCTATAATGGAACTGATGCTGACGGCCATAAGACTCCCAATCTACGAAATAGCGAACATAGCGCAGGCCTGTAGAAATGCTAAGACGGCGGATGCACAGAAAGTGAACAATAAAAAAATTAAATAG
Protein
MIMRLCGCVPHFYKKIENERICSLPELRCIVLYKREITTLTASNETLQRFNDYTDLPRRSRDCGCLGDCEADVYQQDPASLLPQESLNRLRISVTSFPKVRFMREIMFSTYDIILRSGGIVNLCIGTSFISIMELMLTAIRLPIYEIANIAQACRNAKTADAQKVNNKKIK

Summary

Similarity
Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
EMBL
KQ459585    KPI98418.1    APGK01043502    KB741014    ENN75495.1    KQ973114    + More
EFA12114.2    GEZM01080733    JAV62065.1    RSAL01000175    RVE45049.1    GECU01033329    JAS74377.1    KQ460864    KPJ11815.1    GEZM01080732    JAV62066.1    BABH01013035    ODYU01003023    SOQ41265.1    KQ459586    KPI97932.1    KQ460883    KPJ11348.1    GEDC01017185    JAS20113.1    CH940648    KRF79677.1    KK856919    PTY26579.1    GGMR01010350    MBY22969.1    CH933808    EDW10033.2    UFQS01002201    UFQT01002201    SSX13481.1    SSX32911.1    ACPB03000915    CH902619    KPU76597.1    CH963850    EDW74926.2    ATLV01023206    KE525341    KFB48589.1    AE013599    AHN56495.1    CM000071    ENO01847.2    CM002911    KMY95679.1    AAF46777.2    CP012524    ALC40968.1    PYGN01000211    PSN51115.1    AAAB01008807    EAA04078.5    OUUW01000001    SPP75396.1    LJIG01000245    KRT86695.1    CM000158    KRJ99686.1    CH954179    KQS62314.1    PYGN01000073    PSN55272.1    KK852851    KDR15054.1    KQ971371    EFA10172.2    ABLF02031579    ABLF02031581    CCAG010016192    AGBW02010291    OWR48797.1    AXCM01003059    KB632293    ERL91617.1    UFQT01000343    SSX23390.1    ABLF02037336    CH933810    EDW07839.1    NNAY01000660    OXU27138.1    KQ761346    OAD57838.1    JXJN01023841    JXJN01023842    NNAY01000645    OXU27221.1    AE014298    AAF48734.2    CM000162    EDX02617.2    CH954180    EDV46498.2    AGB95488.1    HM026485    ADL60138.1    JRES01000866    KNC27674.1    CH480832    EDW46275.1    CH916370    EDW00176.1    EDO64702.1    KQ435922    KOX68687.1    CH963851    EDW75033.2    NEVH01016978    PNF24738.1    KQ435881    KOX69844.1    JTDY01002246    KOB71808.1    GGMS01015972    MBY85175.1    KK852925    KDR13715.1    CH940651    EDW65495.2    NEVH01022635    PNF18623.1    GANO01003129    JAB56742.1    KQ414612    KOC69152.1    DS232771    EDS45556.1    CP012528    ALC49816.1    JXUM01096276    KQ564253    KXJ72523.1   
Pfam
PF00858   ASC
Interpro
IPR001873   ENaC        + More
IPR020903   ENaC_CS       

Ontologies

Topology

Length:
171
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
18.55684
Exp number, first 60 AAs:
0
Total prob of N-in:
0.63063
inside
1  -  112
TMhelix
113  -  135
outside
136  -  171
 
 

Population Genetic Test Statistics

Pi
47.854746
Theta
118.131297
Tajima's D
-1.960991
CLR
188.37758
CSRT
0.0175991200439978
Interpretation
Uncertain
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