Gene

KWMTBOMO12580  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001437

Annotation

eukaryotic_translation_initiation_factor_2_subunit_2_[Bombyx_mori]

Location

Bomo_Chr21(-):8442122-8443375      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.384

CDS

ATGGACGACGATATGATATTTGATCCTTCGTTGAAGAAGAAAAAGAAAAAGAAGACTGGTTTTGATTTAGAAGCTGCTCTTGCTGGTGAGCAAGGTGAGAGCACGAGTATGGAGACACCCGCAGATACAGGTGACGTCGACGCGCCCGAAGACGATAACCTCGATTTAGACAATTTTGGCAAAAAGAAAAAGAAAAAGAAGAAGACGTTTTTCAATCTCGGAGAATTAGAAAATGCCTTGCCTGAAACACCGCCAACCGAAGAACCGGAAGCGCAGGAAGACGAAGTAATGGATGATCTAGATTTGGATATAGATTTCACTAAGACGAAAAAGAAAAAGAGGAAGAAGGATAAAAATGTAGATGAACTGGTCACAGAAGAAGATGTCAGAGGAGAAGATCAAGAAAATGTGGAAGATGAGCACGGTGAATGGGTTGGAAGTGATCATGATTACTCATATGACGAACTTCTAGAACGAGTTTTTGATATTATGCGGGAAAAGAACCCAAGCATGGTATCTGGTAAAAAGCAAAAGTTCATAATGAGACCACCCCAAGTAGTCCGAATTGGTACAAAGAAAACCTCCTTTGCCAATTTTACGGAAATTTGTAAAACTTTGCATCGGCAGGCCAAGCATTTGTTGGATTTTCTTCTGGCGGAATTGGGTACTAGTGGTTCAGTGGATGGAAACAGTCAACTAATTATCAAAGGTCGCTTCCAACAAAAACAGATAGAGAATGTTTTACGTCGGTATATAAAAGAGTATGTAACATGTCATACATGCCGCTCCCCTGATACAATTTTACAGAAAGATACTAGATTATTCTTCCTTCAATGTGAGACATGTGGGTCTCGTTGTTCAGTGGCTAGCATTAAATCTGGTTTCCAAGCTGTGACTGGCAAGCGTGCTGCCATCCGTGCAAAGACTGCATAG

Protein

MDDDMIFDPSLKKKKKKKTGFDLEAALAGEQGESTSMETPADTGDVDAPEDDNLDLDNFGKKKKKKKKTFFNLGELENALPETPPTEEPEAQEDEVMDDLDLDIDFTKTKKKKRKKDKNVDELVTEEDVRGEDQENVEDEHGEWVGSDHDYSYDELLERVFDIMREKNPSMVSGKKQKFIMRPPQVVRIGTKKTSFANFTEICKTLHRQAKHLLDFLLAELGTSGSVDGNSQLIIKGRFQQKQIENVLRRYIKEYVTCHTCRSPDTILQKDTRLFFLQCETCGSRCSVASIKSGFQAVTGKRAAIRAKTA

Uniprot

Q0ZB78   S4PD43   A0A2H1VLT7   A0A3S2NC30   A0A212EWN0   A0A2A4K3M1   + More
A0A0L7KJK2   A0A1E1VYZ0   K7J5B2   A0A232F3L5   E2BG68   A0A411G7Y3   A0A1B6F6B7   A0A1B6MCK5   E2AAQ4   A0A1B6IVX2   J9JVZ8   A0A0N0U3V5   A0A0L7QQH0   A0A2A3E2S8   A0A1J1IMI2   W8C6Y6   A0A2H8TRH2   B4LGP4   B4IX70   A0A0K8U2F2  

Pubmed

19121390    23622113    22118469    26227816    20075255    28648823    + More
20798317    24495485    17994087   

EMBL

BABH01006272    DQ645458    ABG54286.1    GAIX01003811    JAA88749.1    ODYU01003259    + More
SOQ41778.1    RSAL01000244    RVE43601.1    AGBW02011934    OWR45889.1    NWSH01000211    PCG78363.1    JTDY01009614    KOB63216.1    GDQN01011107    JAT79947.1    AAZX01017917    NNAY01001112    OXU25099.1    GL448115    EFN85336.1    MH366187    QBB01996.1    GECZ01023960    JAS45809.1    GEBQ01006322    JAT33655.1    GL438137    EFN69504.1    GECU01016621    JAS91085.1    ABLF02028257    KQ435878    KOX70051.1    KQ414786    KOC60863.1    KZ288466    PBC25449.1    CVRI01000054    CRL00294.1    GAMC01000852    JAC05704.1    GFXV01004970    MBW16775.1    CH940647    EDW70509.1    CH916366    EDV97402.1    GDHF01031606    JAI20708.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000218220    UP000037510    UP000002358    + More
UP000215335    UP000008237    UP000000311    UP000007819    UP000053105    UP000053825    UP000242457    UP000183832    UP000008792    UP000001070   

PRIDE

Q0ZB78   

Pfam

PF01873   eIF-5_eIF-2B

Interpro

IPR016190   Transl_init_fac_IF2/IF5_Zn-bd        + More
IPR002735   Transl_init_fac_IF2/IF5       
IPR016189   Transl_init_fac_IF2/IF5_N       

SUPFAM

SSF75689   SSF75689        + More
SSF100966   SSF100966       

ProteinModelPortal

Q0ZB78   S4PD43   A0A2H1VLT7   A0A3S2NC30   A0A212EWN0   A0A2A4K3M1   + More
A0A0L7KJK2   A0A1E1VYZ0   K7J5B2   A0A232F3L5   E2BG68   A0A411G7Y3   A0A1B6F6B7   A0A1B6MCK5   E2AAQ4   A0A1B6IVX2   J9JVZ8   A0A0N0U3V5   A0A0L7QQH0   A0A2A3E2S8   A0A1J1IMI2   W8C6Y6   A0A2H8TRH2   B4LGP4   B4IX70   A0A0K8U2F2  

PDB

6I7T     E-value=2.21395e-40,     Score=415

KEGG

733143    K03238 translation initiation factor 2 subunit 2 | (RefSeq) eukaryotic translation initiation factor

PATHWAY

03013    RNA transport - Bombyx mori (domestic silkworm)

GO

GO:0003743   GO:0016199   GO:0034976   GO:0006413   GO:0016021   GO:0006813   GO:0015269   GO:0015074   GO:0004190   GO:0006508   GO:0016286  

Length:

310

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00124

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01499

outside

1  -  310

 

 

Pi

146.629409

Theta

204.038261

Tajima's D

-0.884078

CLR

18.600885

CSRT

0.167391630418479

Interpretation

Uncertain