SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12579  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001536
Annotation
Beta-ureidopropionase_[Papilio_xuthus]
Location in the cell
Cytoplasmic   Reliability : 2.419
 

Sequence

CDS
ATGGCTTCTGCAGAACTCACAAGTTTGGATGAAGTAATATCAAATTCATTAAAGGGTAAAGAACTAGAAGAGTTTAATAGAATTCACTATGGAAGAATAGACCAATGTGCTTTGTTTATCAGTTCCGTTGCTGCCCAAAAAGCCGCTAGCAATGGATTTGAAATAAAAGCTTATGATTTTCCTGCAAGAAAAGAAGAATGCAGGAAACCTCGCATTGTAAGATTAGGCCTCATACAACATTCTATTGCTATCTCTACTGATAACCCAATTACTCAACAACGACTAGCTATATTCGAAAAGGTTCAAAAGATCATATCTGCTGCAGCTGCAGAGCAAGTTAATATTCTTTGTTTACAAGAAGCTTGGAACATGCCCTTTGCATTTTGTACAAGAGAAAAGCAACCATGGTGTGACTTTGCAGAACCTGTGTTGACTGGCCCTAGCACAGTTTTTTTAGCAGAGCTTGCAGTGAAGTATGACATGGTTATCATATCTCCAATTTTAGAACGAGATGATATTCATGGAGATACTATTTGGAATACAGCAGTAGTTATCAATGAATTTGGAAAGGTAATAGGAAAACACCGTAAAAACCACATTCCAAGGGTTGGAGATTTCAATGAATCTACATATTATTTTGAAGGTAATACTGGTCATCCAGTATTTGAAACAAAATATGGTAAAGTTGCCATCAATATTTGCTATGGTCGTCACCATCCACTAAACTGGCTAATGTTTGGTATCAATGGTGCTGAAATTGTATTTAACCCATCAGCAACAGTTTCAGGTTTAAGTGAACATTTGTGGGCAGTTGAAGCTCGCAATGCAGCTATAGCCAACAGTTATTATACATGTGCTATAAACAGAGTAGGAACTGAATCATTCCCAAATGAATTTACATCTGGAGATGGAAAACCAGCACATAAAGATTTTGGACACTTCTATGGTTCTAGCTATGTGACAGCACCTGATGGTAGCAGAACTCCAGGCCTGTCTCGAATTAAGGATGGTTTACTTATTGCCCAAGTTGATCTAAACTTGTGTCGCCAAATTAAAGACAAGTGGGGATTCACTATGACTCAACGCCTTGACTTATATGCTCAAAGTCTAAATGAAGCTATAAAGCATGATTATGTACCTCAAGTGGTACACAAGTAA
Protein
MASAELTSLDEVISNSLKGKELEEFNRIHYGRIDQCALFISSVAAQKAASNGFEIKAYDFPARKEECRKPRIVRLGLIQHSIAISTDNPITQQRLAIFEKVQKIISAAAAEQVNILCLQEAWNMPFAFCTREKQPWCDFAEPVLTGPSTVFLAELAVKYDMVIISPILERDDIHGDTIWNTAVVINEFGKVIGKHRKNHIPRVGDFNESTYYFEGNTGHPVFETKYGKVAINICYGRHHPLNWLMFGINGAEIVFNPSATVSGLSEHLWAVEARNAAIANSYYTCAINRVGTESFPNEFTSGDGKPAHKDFGHFYGSSYVTAPDGSRTPGLSRIKDGLLIAQVDLNLCRQIKDKWGFTMTQRLDLYAQSLNEAIKHDYVPQVVHK

Summary

EMBL
BABH01006272    NWSH01000211    PCG78364.1    ODYU01003259    SOQ41779.1    KQ459585    + More
KPI98426.1    KQ459896    KPJ19394.1    AK401518    BAM18140.1    JTDY01009614    KOB63217.1    GAIX01004921    JAA87639.1    UFQT01001408    SSX30420.1    UFQS01000034    UFQT01000034    SSW97906.1    SSX18292.1    CVRI01000037    CRK93358.1    GANO01001845    JAB58026.1    NWSH01006150    PCG63633.1    CH933808    EDW08295.2    ODYU01004363    SOQ44163.1    BABH01006545    CP012524    ALC41465.1    KQ460325    KPJ15829.1    QCYY01003537    ROT62833.1    CH477653    EAT37751.1    GDRN01077926    GDRN01077925    GDRN01077923    JAI62667.1    GAMC01003399    JAC03157.1    GU354318    ADB27116.1    GFDF01001176    JAV12908.1    AK401302    KQ459193    BAM17924.1    KPJ03095.1    GFDF01001177    JAV12907.1    GDIP01020116    JAM83599.1    AAAB01008980    EAA13946.2    APCN01005251    AXCN02001862    ACPB03024493    GDIP01181937    JAJ41465.1    GDIP01181938    JAJ41464.1    GL732580    EFX74852.1    KB199650    ESP05094.1    CH940667    EDW57165.2    KA646257    AFP60886.1    JTDY01001176    KOB74647.1    AXCM01000430    MG846908    AXY94760.1    DS231866    EDS40510.1    GFDL01006163    JAV28882.1    GDIQ01001384    JAN93353.1    CH916367    EDW02365.1    CH902617    EDV41855.1    CH480821    EDW55255.1    CM000364    EDX12010.1    CCAG010014075    CH964239    EDW82829.1    KE346371    KJE96277.1    EZ422685    ADD18961.1    GDHF01009329    JAI42985.1    GDIP01162694    JAJ60708.1    AGBW02011420    OWR46693.1    GFTR01005628    JAW10798.1    JXJN01000364    CM000160    EDW96348.1    AE014297    AF333187    AAF54141.2    AAK60520.1    BT011121    AAR82788.1    CH892044    EDX00135.1    JRES01001669    KNC21021.1    CH954181    EDV48168.1    QOIP01000011    RLU16471.1    KK107078    EZA60272.1    CAEY01001117    GGFL01004456    MBW68634.1    GBHO01004492    GDHC01020776    JAG39112.1    JAP97852.1    GBBI01002443    JAC16269.1    ABLF02023704    GEMB01000559    JAS02571.1    OUUW01000011    SPP86470.1    KQ419533    KOF83291.1    GBRD01004313    JAG61508.1    PYGN01000078    PSN55002.1    KPJ03097.1    GBHO01004491    GBHO01004490    GDHC01017394    JAG39113.1    JAG39114.1    JAQ01235.1    KQ982327    KYQ57684.1    IAAA01027348    LAA06508.1    ATLV01020648    ATLV01020649    KE525304    KFB45476.1    GAKP01008084    JAC50868.1    LBMM01000880    KMQ97298.1    DS985246    EDV23746.1    BT077048    ACO11472.1   
Pfam
PF00795   CN_hydrolase        + More
PF13873   Myb_DNA-bind_5
Interpro
IPR003010   C-N_Hydrolase        + More
IPR036526   C-N_Hydrolase_sf       
IPR028002   Myb_DNA-bind_5       
SUPFAM
SSF56317   SSF56317       
Gene 3D
PDB
2VHI     E-value=1.40462e-150,     Score=1366

Ontologies

Topology

Length:
385
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01023
Exp number, first 60 AAs:
0.00097
Total prob of N-in:
0.00421
outside
1  -  385
 
 

Population Genetic Test Statistics

Pi
87.807671
Theta
138.693701
Tajima's D
-1.169324
CLR
1357.990487
CSRT
0.104394780260987
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
26822097 DFGHFYGSSYVTAPDGSR 100.00 4e-11
26280517 VFIAVSPAQFIK 100.00 4e-11
26822097 VGDFNESTYYFEGNTGHPVFETK 100.00 2e-08
26280517 VGPPSTGAAPAGHVK 100.00 2e-08
26822097 IPPIIINMTP 100.00 2e-07
26280517 DFGGTVIANACGPCIGQWDRK 100.00 2e-07
25044914 DFGGTVIANACGPCIGQWDR 100.00 2e-07
26822097 WGFTMTQR 100.00 0.001
26280517 NAAASTYDKGAAIVDSAK 100.00 0.001
28467696 NAADIINR 100.00 0.001
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