Gene

KWMTBOMO12576

Pre Gene Modal

BGIBMGA001534

Annotation

acyl-CoA_Delta(11)_desaturase_[Bombyx_mori]

Location

Bomo_Chr21(+):8406326-8411710      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.184 PlasmaMembrane   Reliability : 1.749

CDS

ATGATAATCGTTGAATGCAATCTAATAAGAGGAGCTGCGATAATGTACGTGGCGACTGGTTTCGGCATAACGGGTGGAGCACATCGCTTATGGACACACAAATCGTACAAAGCAAAACTCCCGCTAAAATTGTTTTTGCTCTTATGCTTCTCCGCTGCTGGTCAGAACTCTTTATACCAATGGGTACGCGATCACAGAATACATCATAAATTCAGTGATACCGACGCGGACCCACATAACGCGAATAGAGGATTATTTTTCTCACACATTGGCTGGTTAATGATGAAGAAGAATAATGAAGTTATACTTAGAGGGAAACAAATTGATATGAGCGATATTGAAAATGATCCATTTCTGAGGTTTTATGACAAAAACTTCAACTCCCTGAAGCTAGTTTTCTGCTATATTCTGCCAACAATGTTGGGGATTTTGTTGTGGAACGAAGAATGGAAATGTGCTGTGGCATGGCAATGCTTCATAAGGTTTCTTGGCATGTTTCATAGTGAGCTCACTGTGAACAGTCTTGCGCATACATTTGGTTACAAACCTTATAATAAAAATATAGTTCCAGCTGAAAATAGATTCGTATCAATATGCACACTGGGTGAAGGCTGGCATAACTATCATCACGCTTTTCCATTCGACTACAAAGCTGCAGAGCATTTCGATTTCTTCAATTTTGGCACTAAATTTATAAAGTTGTTCGAGAAAATAGGTTGGGCTTATGATCTGAAGGAAGCTACTCCAGAGATGATAAATGCTATTGCCAAGAAATTAGGCGATGGAACACCGGTGCACTTTCCCATTCTAGTTACAAAGACAAATTAA

Protein

MIIVECNLIRGAAIMYVATGFGITGGAHRLWTHKSYKAKLPLKLFLLLCFSAAGQNSLYQWVRDHRIHHKFSDTDADPHNANRGLFFSHIGWLMMKKNNEVILRGKQIDMSDIENDPFLRFYDKNFNSLKLVFCYILPTMLGILLWNEEWKCAVAWQCFIRFLGMFHSELTVNSLAHTFGYKPYNKNIVPAENRFVSICTLGEGWHNYHHAFPFDYKAAEHFDFFNFGTKFIKLFEKIGWAYDLKEATPEMINAIAKKLGDGTPVHFPILVTKTN

Cofactor

Fe cation

Similarity

Belongs to the fatty acid desaturase type 1 family.

Uniprot

T1RU52   G9BY59   A0A3S2NSR1   A0A2H1VHN0   A0A291P0E4   A0A2A4K356   + More
T1RU43   T1RTD4   A0A194REN0   A0A194RIH1   A0A194Q2W5   A0A1L8D6H7   A0A212F8H4   A0A2A4JV26   A0A2A4JW88   H9JYD0   G9BY58   A0A2H1X0N9   A0A0L0BZP6   A0A1A9VPX3   A0A1B6IH88   A0A1A9XNV7   A0A1B6EKR5   E3TMU9   A0A1A9ZF92   A0A1A9WN17   B4K9T3   A0A1B0GE34   D3TN52   B4R1J8   B4PLU0   Q9VA94   A0A034VQK3   A0A1L8D6C8   A0A1W4VQC5   A0A0K8U130   A0A1L8D6I7   W8B9K3   A0A0A1X4V7   A0A1B6MMW0   B3LZD2   A0A1B0CEY1   A0A291P0T4   A0A0U2F3E5   A0A0U2F3E7   A0A2P8ZFC0   A0A2H1VNN0   A0A3B0KVP4   A0A291P0N7   B4M6D6   Q29C24   B4NGT2   B4JEM7   B4GNP6   H9JM62   A0A067QIN8   A0A0J7K2H2   A0A1B6DCJ1   A0A194PGZ7   A0A1Y1MK99   S4P7A1   Q17CJ9   A0A3S2NP26   A0A195FTS5   A0A0M4ES70   A0A151JS66   A0A232EV90   A0A084W6J5   K7IYW5   A0A194R858   A0A1Y1LF74   A0A195E209   A0A158NWQ5   A0A067RJC1   A0A212EQ61   W5J5Z7   B4HZN5   F4WBY7   A0A2A4J0H0   B3P7X0   A0A182SRI4   A0A2J7Q486   A0A182M1I7   A0A0P6IHM7   A0A182JFM4   K7IML3   A0A182JYF7   E2C646   A0A232EI48   A0A2P8ZF66   F5HK92   A0A0T6B724   A0A2H4WB77   W5J374   A0A158NZA7   A0A2J7Q0J6  

Pubmed

24500170    28986331    26354079    22118469    19121390    26108605    + More
20691782    17994087    20353571    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25348373    24495485    25830018    29403074    15632085    24845553    28004739    23622113    17510324    28648823    24438588    20075255    21347285    20920257    23761445    21719571    20798317    12364791    14747013    17210077   

EMBL

JX531674    AGO45859.1    HQ704866    AET36546.1    RSAL01000244    RVE43603.1    + More
ODYU01002605    SOQ40327.1    MF687531    ATJ44457.1    NWSH01000211    PCG78358.1    JX531659    AGO45844.1    JX531665    AGO45850.1    KQ460325    KPJ15745.1    KPJ15746.1    KQ459564    KPI99678.1    GEYN01000134    JAV01995.1    AGBW02009734    OWR50018.1    NWSH01000559    PCG75659.1    PCG75660.1    BABH01043271    BABH01043272    HQ704865    AET36545.1    ODYU01012535    SOQ58905.1    JRES01001112    KNC25461.1    GECU01021427    GECU01014371    GECU01009143    JAS86279.1    JAS93335.1    JAS98563.1    GECZ01031245    JAS38524.1    GU952764    ADO85597.1    CH933806    EDW14558.1    CCAG010012086    EZ422854    ADD19130.1    CM000364    EDX14986.1    CM000160    EDW99077.1    AE014297    AY047565    AAF57020.1    AAK77297.1    GAKP01015109    JAC43843.1    GEYN01000128    JAV02001.1    GDHF01034036    GDHF01031892    GDHF01023085    JAI18278.1    JAI20422.1    JAI29229.1    GEYN01000124    JAV02005.1    GAMC01011209    GAMC01011208    JAB95347.1    GBXI01008396    GBXI01007656    JAD05896.1    JAD06636.1    GEBQ01002690    JAT37287.1    CH902617    EDV44111.1    AJWK01009460    AJWK01009461    MF687585    ATJ44511.1    KP008115    AKU76402.1    KP008122    AKU76409.1    PYGN01000075    PSN55191.1    ODYU01003524    SOQ42423.1    OUUW01000041    SPP89936.1    MF687523    ATJ44449.1    CH940652    EDW59212.1    CM000070    EAL26822.2    CH964272    EDW84429.1    CH916369    EDV93158.1    CH479186    EDW39372.1    BABH01033466    KK853306    KDR08706.1    LBMM01016179    KMQ84512.1    GEDC01030129    GEDC01013889    JAS07169.1    JAS23409.1    KQ459603    KPI92671.1    GEZM01029031    JAV86162.1    GAIX01007792    JAA84768.1    CH477308    EAT44022.1    RSAL01000020    RVE52654.1    KQ981276    KYN43687.1    CP012526    ALC47547.1    KQ978543    KYN30213.1    NNAY01002028    OXU22271.1    ATLV01020821    KE525308    KFB45839.1    KQ460845    KPJ12051.1    GEZM01060604    JAV70980.1    KQ979824    KYN18939.1    ADTU01028335    KK852437    KDR23917.1    AGBW02013325    OWR43604.1    ADMH02002143    ETN58290.1    CH480819    EDW53492.1    GL888067    EGI68276.1    NWSH01004597    PCG64873.1    CH954182    EDV53097.1    NEVH01018390    PNF23385.1    AXCM01001395    GDIQ01004277    JAN90460.1    GL452916    EFN76589.1    NNAY01004348    OXU18023.1    PSN55142.1    AAAB01008859    EAU77039.3    EGK96644.1    EGK96645.1    LJIG01009394    KRT83167.1    KY172016    AUC64292.1    ETN58291.1    ADTU01004248    NEVH01019966    PNF22107.1   

Proteomes

UP000283053    UP000218220    UP000053240    UP000053268    UP000007151    UP000005204    + More
UP000037069    UP000078200    UP000092443    UP000092445    UP000091820    UP000009192    UP000092444    UP000000304    UP000002282    UP000000803    UP000192221    UP000007801    UP000092461    UP000245037    UP000268350    UP000008792    UP000001819    UP000007798    UP000001070    UP000008744    UP000027135    UP000036403    UP000008820    UP000078541    UP000092553    UP000078492    UP000215335    UP000030765    UP000002358    UP000005205    UP000000673    UP000001292    UP000007755    UP000008711    UP000075901    UP000235965    UP000075883    UP000075880    UP000075881    UP000008237    UP000007062   

PRIDE

T1RU52    G9BY59    H9JYD0    G9BY58    Q9VA94    H9JM62    + More

Pfam

PF00487   FA_desaturase

Interpro

IPR005804   FA_desaturase_dom        + More
IPR015876   Acyl-CoA_DS       
IPR001522   FADS-1_CS       

CDD

cd03505  Delta9-FADS-like

ProteinModelPortal

T1RU52   G9BY59   A0A3S2NSR1   A0A2H1VHN0   A0A291P0E4   A0A2A4K356   + More
T1RU43   T1RTD4   A0A194REN0   A0A194RIH1   A0A194Q2W5   A0A1L8D6H7   A0A212F8H4   A0A2A4JV26   A0A2A4JW88   H9JYD0   G9BY58   A0A2H1X0N9   A0A0L0BZP6   A0A1A9VPX3   A0A1B6IH88   A0A1A9XNV7   A0A1B6EKR5   E3TMU9   A0A1A9ZF92   A0A1A9WN17   B4K9T3   A0A1B0GE34   D3TN52   B4R1J8   B4PLU0   Q9VA94   A0A034VQK3   A0A1L8D6C8   A0A1W4VQC5   A0A0K8U130   A0A1L8D6I7   W8B9K3   A0A0A1X4V7   A0A1B6MMW0   B3LZD2   A0A1B0CEY1   A0A291P0T4   A0A0U2F3E5   A0A0U2F3E7   A0A2P8ZFC0   A0A2H1VNN0   A0A3B0KVP4   A0A291P0N7   B4M6D6   Q29C24   B4NGT2   B4JEM7   B4GNP6   H9JM62   A0A067QIN8   A0A0J7K2H2   A0A1B6DCJ1   A0A194PGZ7   A0A1Y1MK99   S4P7A1   Q17CJ9   A0A3S2NP26   A0A195FTS5   A0A0M4ES70   A0A151JS66   A0A232EV90   A0A084W6J5   K7IYW5   A0A194R858   A0A1Y1LF74   A0A195E209   A0A158NWQ5   A0A067RJC1   A0A212EQ61   W5J5Z7   B4HZN5   F4WBY7   A0A2A4J0H0   B3P7X0   A0A182SRI4   A0A2J7Q486   A0A182M1I7   A0A0P6IHM7   A0A182JFM4   K7IML3   A0A182JYF7   E2C646   A0A232EI48   A0A2P8ZF66   F5HK92   A0A0T6B724   A0A2H4WB77   W5J374   A0A158NZA7   A0A2J7Q0J6  

PDB

4ZYO     E-value=5.1017e-60,     Score=584

KEGG

100862799    K00507 stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1] | (RefSeq) BmorVPAE; acyl-CoA Del

PATHWAY

01040    Biosynthesis of unsaturated fatty acids - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01212    Fatty acid metabolism - Bombyx mori (domestic silkworm)

GO

GO:0016717   GO:0016021   GO:0006633   GO:0016491   GO:0004768   GO:0006636   GO:0005506   GO:0005789   GO:0006629   GO:0006813   GO:0015269   GO:0015074   GO:0004190   GO:0006508   GO:0016286   GO:0055114  

PANTHER

PTHR11351  

Length:

275

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

48.364

Exp number, first 60 AAs:

30.58225

Total prob of N-in:

0.85351

POSSIBLE N-term signal

sequence

outside

1  -  275

 

 

Pi

167.245589

Theta

174.79197

Tajima's D

-0.529534

CLR

0.000343

CSRT

0.233338333083346

Interpretation

Uncertain