SGID The Silkworm Genome Information Database
Gene
KWMTBOMO12575
Pre Gene Modal
BGIBMGA001533
Annotation
PREDICTED:_uncharacterized_protein_LOC101741259_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 3.006
 

Sequence

CDS
ATGCAGTGGGACGGACTCTACTTCGTGATTCTAGCATTATGTTGTCTGCACACTGCATCTGAGCCATTGCGGTTCCCAGAAGACTACAGAACGAATGGTGTCCGTAGACGTAGAAGCGAGGAAAAGGACAGCCTCGCACTTTCAAGAGAAATATTTAAAAACATCACGAAACAGCTTCGGGAGAACATCAAGCGAGAAGGGGCGACTGACAAGACCGATCATTTGTTACAGACTAAGGTAGAAGACACGAGAAATTATGCTCCATATCAAAGTTACCACGATCATCACCACGAACACCACTGGGGGCCATATTTCGAGGAGGAGAAGTACACTCAAGTCACGGCTCACGTGGGAGCTGAGGCGCTGTTAAATTGCCGGGTTGTAATGCTCAAAGATAAAACAGTGATGTGGCTGCGTAACACGACCGACTCTGCGCAACTACTTACCGTTGGTCCCGCTCCATATACGGGCGATAGTCGGATCGCAGTAAAATTCCAATATCCAAACAATTGGAGGCTTAGCATGAATCCTGTGAAAAGATCTGACGCAGGGCACTATATGTGCCAAATATCCACTCATCCTCCTAGAACCATATTTACGAACCTAACCGTATTACCTCCAGTAATAACAATAAACGGAGACGATTCGCACGATATGAAAGATAGATTTTACAAAGCGGGTACAACGACCAGAAAACCTGAAACGACTACAAAAGAGTTGACAACAGTTGTTCCAACCACACCGCCTACGGTGAATAATGTGTACGGAATTATGTGGAGGAAACAGGGGAAGGACTTTTTCCAAAATGTCACTTGGAGGAATTTAAGTGCCACAATAAGTGTAACGTCGGCATCACAAAATGACAGTGGAACCTACACATGCCTTCTACTCAATCATTCTCAAGTCACCATTAACGTTCACGTATTGATTGGCGAGAACCAAGCTGCTGTACATCATGACACGTGGAACAAAGGAACTTTGTTTTGGCATTCGCAAGAGTTTTACCTATTTGTTCTATCAAATTTACTTGTGCTATATCTTTAA
Protein
MQWDGLYFVILALCCLHTASEPLRFPEDYRTNGVRRRRSEEKDSLALSREIFKNITKQLRENIKREGATDKTDHLLQTKVEDTRNYAPYQSYHDHHHEHHWGPYFEEEKYTQVTAHVGAEALLNCRVVMLKDKTVMWLRNTTDSAQLLTVGPAPYTGDSRIAVKFQYPNNWRLSMNPVKRSDAGHYMCQISTHPPRTIFTNLTVLPPVITINGDDSHDMKDRFYKAGTTTRKPETTTKELTTVVPTTPPTVNNVYGIMWRKQGKDFFQNVTWRNLSATISVTSASQNDSGTYTCLLLNHSQVTINVHVLIGENQAAVHHDTWNKGTLFWHSQEFYLFVLSNLLVLYL

Summary

Pfam
PF07679   I-set        + More
PF00047   ig
Interpro
IPR013098   Ig_I-set        + More
IPR037448   Zig-8       
IPR013783   Ig-like_fold       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR013151   Immunoglobulin       
IPR013106   Ig_V-set       
SUPFAM
SSF48726   SSF48726       
Gene 3D
PDB
5EO9     E-value=1.08709e-13,     Score=185

Ontologies

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.974714
 
 
Length:
347
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.783799999999998
Exp number, first 60 AAs:
0.58761
Total prob of N-in:
0.03527
outside
1  -  347
 
 

Population Genetic Test Statistics

Pi
202.438622
Theta
158.290092
Tajima's D
0.924527
CLR
0.294022
CSRT
0.637518124093795
Interpretation
Uncertain
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