Gene

KWMTBOMO12573

Pre Gene Modal

BGIBMGA001531

Annotation

neuropeptide_receptor_A21_[Bombyx_mori]

Location

Bomo_Chr21(+):7880001-7895435      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.99

CDS

ATGGCTTTTTTATCCTTCATTGGCAATGTGGCAACAATTATAAGCATTCGGAGGAGTAAAAGATGCAGAGGAAGAGCACGACCTTCTTGGACCGCCATTTACAGTTTAATATTCCAGCTCAGTATAGCTGACTTGCTAGTAACGATCTTCTGTATAGCAGGAGAAGCCGCTTGGTCGTTTGCTGTCCAGTGGTATGCTGGTAATATTGGATGCAAATTATTCAAATTCCTACAGATGCTAGCTCTTTATTTGAGCACTTTTGTCTTAGTACTAATAGGAGTGGATCGGTGGCTTGCCGTTAAATATCCAATGAAAAGTATGGCTACAGCGACAAGAAGCGGAAGGCTGGTTATAATTGCGTGGGTCCTGAGCGTCATACTCAGCATTCCTCAGGCCGTAGTATTCCGAGTAGCAAAAGGCCCGTTCTTTGAAGAGTTCCATCAGTGTGTTACACATGGATTCTACACGGAGCGATGGCAGGAACAAGCATACACTACTCTGTCGCTAGTCTTTATGTTCATACTGCCATTGATTATATTGGTTTCTACTTATGTGTCGACGGTTAGGACAATTGCACAGAGTGAAAAAGTATTCAAACCTGAAGTCAGAAGGCAAGAAAAATATTTCACTCCCGACATGAATAGACGGAGATTAATAGATCGGGCTAAGATGAAATCTTTGAGGATGTCCGTTGTTATTGTGGCTGCGTTTCTGATATGGTGGACTCCGTACTACGTAATGATGATAATATTTACGTTTCTGAATCCAGACAAAAACCAAAGTGAAGAGCTACTGAACGGTATATTTTTCTTCGGAATGTCAAACAGTCTAGTCAACCCCATCATATACGGGGCTTTCCATTTGTGGCCGAGAAAGAAACGTTCATACCAGCATAGTGACCGGTATGTTGAATAA

Protein

MAFLSFIGNVATIISIRRSKRCRGRARPSWTAIYSLIFQLSIADLLVTIFCIAGEAAWSFAVQWYAGNIGCKLFKFLQMLALYLSTFVLVLIGVDRWLAVKYPMKSMATATRSGRLVIIAWVLSVILSIPQAVVFRVAKGPFFEEFHQCVTHGFYTERWQEQAYTTLSLVFMFILPLIILVSTYVSTVRTIAQSEKVFKPEVRRQEKYFTPDMNRRRLIDRAKMKSLRMSVVIVAAFLIWWTPYYVMMIIFTFLNPDKNQSEELLNGIFFFGMSNSLVNPIIYGAFHLWPRKKRSYQHSDRYVE

Similarity

Belongs to the G-protein coupled receptor 1 family.

Uniprot

B3XXN4   A0A0S1YDE4   Q6UJG5   A0A437BC98   H9IWA0   A0A212FDW3   + More
A0A2H1VMI5   A0A2A4JH99   A0A067R371   A0A0L7L9J6   A0A154P2C5   A0A1B6GX58   A0A0L7RJV1   A0A1B6CD83   A0A336LYP3   A0A1Z1G8H2   A0A1S3DNI8   A0A310SJD8   A0A195F5T0   A0A182IRT8   A0A146LNL0   A0A026W6X2   A0A2P1A8T2   A0A158NQV0   A0A151WNJ9   A0A411JKC0   A0A182Q7C8   E2BIC7   A0A195BEI6   A0A172QNN0   A0A172QNR9   T1H924   A0A1V1FZU0   A0A151IW23   A0A0N1I777   B7ZKE3   A0A182YAD9   A0A194Q2A9   A0A2C9GPY5   Q1JQR7   Q8T5I8   A0A195C961   A0A182L9L1   A0A1J1HWS6   B4J335   B4L067   A0A3B0K3Y9   A0A1W4UW52   B4HFL8   A0A0M4EER9   B4QR93   Q9VTW7   B4N3I9   B4GRD6   Q8ITC8   Q8MX81   B3M7T4   B4LFF9   M9PF00   Q2M0N6   A0A0J9RTV6   B4PGC3   B3NH94   A0A1I8NES4   F8V1V4   A0A182VMV0   A0A1B0FZZ8   A0A1A9ZG33   T1IWT0   A0A1S7BHU6   T1IX11   A0A226ERS0   A0A2L0WQE5   U3U7N8   V5REB4   A0A1L1VVD9   A0A0P6IQK6   A0A0P5WYZ5   A0A0N8DJ44   A0A0P5AYW6   A0A1L8DK81   A0A0P5ARH5   E0VMA9   A0A0N8A0M0   A0A0N8AEI9   A0A164U5K8   A0A1I8Q7Y5   A0A0K2T5B4   E9G036   A0A0K2SW71   X1YZA9   R7TQD2   W8BTM8  

Pubmed

18725956    15096620    19121390    22118469    24845553    26227816    + More
28254268    26823975    24508170    30249741    29432729    21347285    30735632    20798317    28119086    26354079    25244985    16616003    12060762    12364791    14747013    17210077    20966253    17994087    18057021    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    12177421    12379215    15632085    22936249    17550304    25315136    22326268    28261106    29379412    23932938    20566863    21292972    23254933    24495485   

EMBL

AB330442    BAG68420.1    KT031019    ALM88317.1    AY369029    AAR14318.1    + More
RSAL01000092    RVE47961.1    BABH01006215    AGBW02009008    OWR51877.1    ODYU01003358    SOQ42017.1    NWSH01001526    PCG70964.1    KK852941    KDR13524.1    JTDY01002085    KOB72148.1    KQ434791    KZC05368.1    GECZ01002786    JAS66983.1    KQ414579    KOC71145.1    GEDC01025907    JAS11391.1    UFQS01000043    UFQT01000043    SSW98402.1    SSX18788.1    KY110361    ARV86500.1    MG550210    AWT50644.1    KQ766578    OAD53680.1    KQ981810    KYN35429.1    GDHC01010267    JAQ08362.1    KK107372    QOIP01000004    EZA51728.1    RLU23398.1    MF988329    AVI09462.1    ADTU01023620    ADTU01023621    ADTU01023622    KQ982907    KYQ49388.1    MH810202    QBC65467.1    AXCN02001150    GL448504    EFN84515.1    KQ976500    KYM83001.1    KU052880    AND99324.1    KU052881    AND99325.1    ACPB03003860    ACPB03003861    LC177796    BAX09334.1    KQ980874    KYN12036.1    KQ461068    KPJ09923.1    AY898651    AAX83120.1    KQ459564    KPI99676.1    APCN01000883    AY301275    AAQ67361.1    AJ439353    AAAB01008987    CAD27924.1    EAA01361.2    KQ978068    KYM97404.1    CVRI01000029    CRK92469.1    CH916366    EDV96106.1    CH933809    EDW18013.1    KRG05898.1    OUUW01000012    SPP87412.1    CH480815    EDW41249.1    CP012525    ALC44321.1    CM000363    EDX10223.1    AE014296    AY071408    AAF49928.2    AAL49030.1    CH964095    EDW79194.2    CH479188    EDW40321.1    AF522192    AAN10045.1    AF373862    AAM21341.1    CH902618    EDV38807.2    CH940647    EDW69257.1    KRF84274.1    KRF84275.1    KRF84276.1    AGB94448.1    CH379069    EAL30894.2    CM002912    KMY99216.1    CM000159    EDW94287.2    CH954178    EDV51551.2    JN003596    AEI91710.1    CCAG010014067    JH431629    KX831394    AQX83392.1    JH431639    LNIX01000002    OXA59754.1    MF974386    AVA26879.1    AB817313    BAO01080.1    KF601825    AHB33640.1    KF309025    AHE76192.1    GDIQ01001682    JAN93055.1    GDIP01080147    JAM23568.1    GDIP01028695    JAM75020.1    GDIP01192482    JAJ30920.1    GFDF01007297    JAV06787.1    GDIP01195482    JAJ27920.1    DS235306    EEB14515.1    GDIP01194177    JAJ29225.1    GDIP01155225    JAJ68177.1    LRGB01001581    KZS11080.1    HACA01003862    CDW21223.1    GL732528    EFX87464.1    HACA01000160    CDW17521.1    AMQN01012619    KB309640    ELT93721.1    GAMC01009914    JAB96641.1   

Proteomes

UP000283053    UP000005204    UP000007151    UP000218220    UP000027135    UP000037510    + More
UP000076502    UP000053825    UP000079169    UP000078541    UP000075880    UP000053097    UP000279307    UP000005205    UP000075809    UP000075886    UP000008237    UP000078540    UP000015103    UP000078492    UP000053240    UP000005203    UP000076408    UP000053268    UP000075840    UP000007062    UP000078542    UP000075882    UP000183832    UP000001070    UP000009192    UP000268350    UP000192221    UP000001292    UP000092553    UP000000304    UP000000803    UP000007798    UP000008744    UP000007801    UP000008792    UP000001819    UP000002282    UP000008711    UP000095301    UP000075903    UP000092444    UP000092445    UP000198287    UP000009046    UP000076858    UP000095300    UP000000305    UP000014760   

PRIDE

B3XXN4    H9IWA0    Q8ITC8    Q8MX81   

Pfam

PF00001   7tm_1

Interpro

IPR000276   GPCR_Rhodpsn        + More
IPR017452   GPCR_Rhodpsn_7TM       

ProteinModelPortal

B3XXN4   A0A0S1YDE4   Q6UJG5   A0A437BC98   H9IWA0   A0A212FDW3   + More
A0A2H1VMI5   A0A2A4JH99   A0A067R371   A0A0L7L9J6   A0A154P2C5   A0A1B6GX58   A0A0L7RJV1   A0A1B6CD83   A0A336LYP3   A0A1Z1G8H2   A0A1S3DNI8   A0A310SJD8   A0A195F5T0   A0A182IRT8   A0A146LNL0   A0A026W6X2   A0A2P1A8T2   A0A158NQV0   A0A151WNJ9   A0A411JKC0   A0A182Q7C8   E2BIC7   A0A195BEI6   A0A172QNN0   A0A172QNR9   T1H924   A0A1V1FZU0   A0A151IW23   A0A0N1I777   B7ZKE3   A0A182YAD9   A0A194Q2A9   A0A2C9GPY5   Q1JQR7   Q8T5I8   A0A195C961   A0A182L9L1   A0A1J1HWS6   B4J335   B4L067   A0A3B0K3Y9   A0A1W4UW52   B4HFL8   A0A0M4EER9   B4QR93   Q9VTW7   B4N3I9   B4GRD6   Q8ITC8   Q8MX81   B3M7T4   B4LFF9   M9PF00   Q2M0N6   A0A0J9RTV6   B4PGC3   B3NH94   A0A1I8NES4   F8V1V4   A0A182VMV0   A0A1B0FZZ8   A0A1A9ZG33   T1IWT0   A0A1S7BHU6   T1IX11   A0A226ERS0   A0A2L0WQE5   U3U7N8   V5REB4   A0A1L1VVD9   A0A0P6IQK6   A0A0P5WYZ5   A0A0N8DJ44   A0A0P5AYW6   A0A1L8DK81   A0A0P5ARH5   E0VMA9   A0A0N8A0M0   A0A0N8AEI9   A0A164U5K8   A0A1I8Q7Y5   A0A0K2T5B4   E9G036   A0A0K2SW71   X1YZA9   R7TQD2   W8BTM8  

PDB

5WS3     E-value=7.55988e-17,     Score=212

KEGG

100174932    K04280 gonadotropin-releasing hormone receptor | (RefSeq) NGR-A21, BNGR-A21, CRZR; neuropeptide rece

PATHWAY

04080    Neuroactive ligand-receptor interaction - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0004930   GO:0007218   GO:0035237   GO:0005887   GO:0008528   GO:0048149   GO:0071361   GO:0006117   GO:0007186   GO:0008188   GO:0006813   GO:0015269   GO:0015074   GO:0004190   GO:0006508   GO:0016286  

Length:

304

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

135.40795

Exp number, first 60 AAs:

23.59408

Total prob of N-in:

0.96659

POSSIBLE N-term signal

sequence

inside

1  -  35

TMhelix

36  -  58

outside

59  -  77

TMhelix

78  -  100

inside

101  -  112

TMhelix

113  -  135

outside

136  -  162

TMhelix

163  -  185

inside

186  -  230

TMhelix

231  -  253

outside

254  -  267

TMhelix

268  -  290

inside

291  -  304

 

 

Pi

267.790108

Theta

171.123766

Tajima's D

0.012478

CLR

1.035103

CSRT

0.366731663416829

Interpretation

Uncertain