Pre Gene Modal
BGIBMGA001528
Annotation
PREDICTED:_serine/arginine_repetitive_matrix_protein_1_[Plutella_xylostella]
Location in the cell
Nuclear Reliability : 4.428
Sequence
CDS
ATGCCTTCAAACAAGAAACTGATCGCGAAGATGAGGCAGATGGTTCAGTGGATCCTGGTCGTGCATGTGGTCGAATTCATAGAAGCGTATTGCACACCACGCGACACAGCCCGGCGGTCGCCACAACGCAGCCGCCGCTCCCGAGAAACGCGTCGTTCGCCCGAAGCGGCCAGATGGCGCTACGAGTCGCGCAGATCCAACTACGACTTTGACAGTCGGCGTCCTTACGAATACGAAAGTCGGAGATATTACGGACGCGAGTTCGACGGTGATTCAGGGAGACGAGCCGAGTTCGACGCGGAGTCCGCTCGGCGCCGCGCGGACTACGAGTCGGCCAGACGTACGGACTTCGACTTATCCGCTCCTGGCGTGTCCAGACGGAGCCCAGAAAGCGCCCCAGAGGGCTCCGTAGAATCGCCTCCAGAACCAGCCCCATCTGCCCCGTTGAGGCACGAGAAGCAATCGAGACATAGGTCACAACAATATTACGAATCAGAATCATCATCAGACGATCGCTCGTCGACATCTGAAGACGAAGAAGACGACGATTTCGGAGAATTCGATCCTTTTGCGACAGCACCGTCGCTACATTCACCTGACAGTGGTCGGTCGGATCCACGATACGCCAACGCGCCGCGTAGAAATCCAAGTCCGTATTATTACGGTGATCTTTTTAAAACAGCCCCTCCGCCACCGGCACCGTCTGCGCCAACTGTTTCGTCTACTTCATCTTCACGAGGACCTCGTTACCGAAAATCGGCTAGCCTAGACGCTCCGCACGTTGCTCCGCGGCCAAATCTTCCTAAACGATTCTCAGTCGCTGAAGATGGATTTCGTGAGCTAGACCGATCCTCTTCTTCGTCAGGTGAGAGCGCGTGGATGCCGCCAAGGCGTCGCGGGCGCGACGCGGCCGGCTGCGCGTGCGCCGCGCCCGAAGATGTAGAGGAGCATCACGCTTCACGTAGCGTCTTTTACGTGCCGGCACCTCTGCCTCGCTGGCCGCAAGAAATGACCACCAGACAGATATACGAAACAGCTTTTGATTGCAAGATTGCGCGTTCTGATGATGATTTGGATGACTTCGACCGAGTCAGTAATCATCCTGCACTTTTGCAAGCTGAAGAACGAAAAATCATTTCTTCAGCATCTTCAGCGTTTGAGGCAGTTGAACGCAGTGAACCCGATTTCAAGGGTCGCCGTAAGGTGACGATGAAAACAGATAGCGTACGTCGTTCTAAAATCCCGACGATACGTCAAAAAAGGGAAAATGAAAACAATGCATGTGCCTTGTCAGAAGAACTGGAAAAAGTGCACATTGAAGGCGAAGAACGCGTCGCTTCAAACTCTCAATTGCCTCTGCGAGGTTACACACCATCACCACCATCCACGGCCCCCTTGCCAACAAAATTTCAACAAAAAGATGGCTCTGCAATGAATAGTATAAAAAGTGCACCCAACTTACCGCAGGCACAGCCAGCACATCCTCGCCTTAAAGATTTGAGATTGCCTGTTAAGTCACTGCGCGCTCGGGATACCCCGACAAGCAGTGACGCTAGTATGGATGTGAAAGGTTCAGTTTCAACTGAACTTGATATTGGACGTCTAAGGGATTCTAGTCGCGAGTCACGCGATGGCGATGATGAAAGAGCACAATCTAAAGACGGTATTTTTTTAGAGATTAAGGGCCGACCCACTTCCGATTCTGACACACCTGAAATGAATCGGTACACGGGGCCAAAGGGGGTCGGTCCTATAATGGAATTTAAGGGCAGGCCGGGCGTGATTCGCCCACGACGGTTTGGGCATCACCATCCGGCTAAATTGAACATCTTGAGTCCCATTTCTGACAAGTCTTCACAGGAACCAGCATCTGAAACTTCCGATAACAATAAGAATAACAACTCCCAAAAGGTGTCACCCGAAGAAGGGGATACGGGCAATGCCACAATCCAAACAGCTGTTGAAATTATTGCCAAACCAAAACGTAGAGCGTTACAAAATCGCAATCTACTGAATCTCACATTCAGACATTCGGCTACTGGTGATGCTGAAATTCAAGGCTCTGACAGTGGTATTTCGATACATTCAAGAGAAGGTGTTGACTCCAGAAATGCGTTCATCAATTTTAAGAATAGCAACACTGGAGAAGAACGCAAGAATGATGATGTCGATCTATCTGATTTGCCGTTCGACATGCCGAAATTGAGGAGGAGACGAGCAGAAGCCGAAGCCGACTTAAGAACCTTGCCATTTGACATGCCAAAATTGCGTCGCAAATTACGGGGTCAATCTTTGCAACTCAATGATGAGTTTGGAGGAGGCATTTCTAATGCTTCATCTAGTCAAAGCGTCGAAGATTTAAACCAAGGTAATAAGCTCAAATCGAGTTTGAAATTGAACTTTGATAGCGGCAGTGGCTCTAGTGGATCCAAAGGATTGCATTTGAATTTGGGGCCTATAGCACCGCCTCGAGATCTGGTTGATGCTACTCTTCCACTTGACCGTCAAGGGTGGTATCATGGGACGTTAGCGCGCGTTGAAGCCGAGAGTCTGCTGAGGGATGCCGACGAAGGCGCGTTTTTGGTCAGAAACAGTGAATCAGCGAAACACGATTATTCACTTAGCTTAAAGTCAACGCGCGGTTTCATGCATATGCGTATCTGCCGAGGTGCCGAAGGCTACACATTGGGCGGTGCTTCTACCGCTTTTCCTTCGGTGCCGGCTCTGATGAGGCATTACGTCACGGCCCAAAGACTCCCCGTGAGAGGAGCAGAACACATGGCACTGTCTACACCCCTGCCCGCTGTCCTGCTTTGA
Protein
MPSNKKLIAKMRQMVQWILVVHVVEFIEAYCTPRDTARRSPQRSRRSRETRRSPEAARWRYESRRSNYDFDSRRPYEYESRRYYGREFDGDSGRRAEFDAESARRRADYESARRTDFDLSAPGVSRRSPESAPEGSVESPPEPAPSAPLRHEKQSRHRSQQYYESESSSDDRSSTSEDEEDDDFGEFDPFATAPSLHSPDSGRSDPRYANAPRRNPSPYYYGDLFKTAPPPPAPSAPTVSSTSSSRGPRYRKSASLDAPHVAPRPNLPKRFSVAEDGFRELDRSSSSSGESAWMPPRRRGRDAAGCACAAPEDVEEHHASRSVFYVPAPLPRWPQEMTTRQIYETAFDCKIARSDDDLDDFDRVSNHPALLQAEERKIISSASSAFEAVERSEPDFKGRRKVTMKTDSVRRSKIPTIRQKRENENNACALSEELEKVHIEGEERVASNSQLPLRGYTPSPPSTAPLPTKFQQKDGSAMNSIKSAPNLPQAQPAHPRLKDLRLPVKSLRARDTPTSSDASMDVKGSVSTELDIGRLRDSSRESRDGDDERAQSKDGIFLEIKGRPTSDSDTPEMNRYTGPKGVGPIMEFKGRPGVIRPRRFGHHHPAKLNILSPISDKSSQEPASETSDNNKNNNSQKVSPEEGDTGNATIQTAVEIIAKPKRRALQNRNLLNLTFRHSATGDAEIQGSDSGISIHSREGVDSRNAFINFKNSNTGEERKNDDVDLSDLPFDMPKLRRRRAEAEADLRTLPFDMPKLRRKLRGQSLQLNDEFGGGISNASSSQSVEDLNQGNKLKSSLKLNFDSGSGSSGSKGLHLNLGPIAPPRDLVDATLPLDRQGWYHGTLARVEAESLLRDADEGAFLVRNSESAKHDYSLSLKSTRGFMHMRICRGAEGYTLGGASTAFPSVPALMRHYVTAQRLPVRGAEHMALSTPLPAVLL
Summary
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF00017 SH2
SUPFAM
SSF55550
SSF55550
Gene 3D
ProteinModelPortal
PDB
4EIH
E-value=1.91135e-07,
Score=136
Ontologies
GO
Topology
Length:
938
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.39861
Exp number, first 60 AAs:
0.18828
Total prob of N-in:
0.00998
outside
1 - 938
Population Genetic Test Statistics
Pi
197.179349
Theta
172.000551
Tajima's D
-1.156318
CLR
1.173821
CSRT
0.112894355282236
Interpretation
Uncertain
