SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12562
Pre Gene Modal
BGIBMGA001445
Annotation
cuticular_protein_RR-1_motif_20_precursor_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.817
 

Sequence

CDS
ATGGAGAACATTGGAAATGATAAACAAGAACAAGTTGTTGAAGGATCATATTCGTATGTTGGTGATGATGGGCAAACGTATTCAGTACATTATATTGCTGATGCGAATGGATTCCGAGCTAGTGGTGACCACTTACCCGTACCTCCTCCTGTACCTGAAATTATTCAAAGTCCTATCACCGTACAAACGGGTGAACCACAGGAAGAAACAACAACCGAAAACTTTAATGACAACTTAAAGGAGAACATTTTCTTGAAACGCTTTTTTAAGAGACAGAAAGAAGAGAAAATTGTTGCTCCGAAAGATAATGCTGATACTAAATCATTAAAAGAAAAACAAGTAGAAAACCATCCAAATAATCACTACGAAGAAGAACCCGAAATTGATTCACAAGAATTTAAACGTGAAAATAAAAAGAACATGTCCCAGGAAGAGCTTCATGGCGTCATCAGAAACTACAAGGTATTACAAAGGAACAATGGAAATTTCAACAAAGAAAGAAATCTAAATCAGATTCGTAAAGATCTCACACCATCAGGAAGAAAAGAAAATTTACCACCGTTGGGCAGAGCAGGACCGTCGATGAAGAGCTATTTGCCGGCTATATACGTTTAA
Protein
MENIGNDKQEQVVEGSYSYVGDDGQTYSVHYIADANGFRASGDHLPVPPPVPEIIQSPITVQTGEPQEETTTENFNDNLKENIFLKRFFKRQKEEKIVAPKDNADTKSLKEKQVENHPNNHYEEEPEIDSQEFKRENKKNMSQEELHGVIRNYKVLQRNNGNFNKERNLNQIRKDLTPSGRKENLPPLGRAGPSMKSYLPAIYV

Summary

Uniprot
ProteinModelPortal

Ontologies

Topology

Length:
204
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.16817
outside
1  -  204
 
 

Population Genetic Test Statistics

Pi
215.290645
Theta
193.438183
Tajima's D
0.333511
CLR
0.000002
CSRT
0.465376731163442
Interpretation
Uncertain
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