Gene

KWMTBOMO12556  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001448

Annotation

PREDICTED:_arginine-glutamic_acid_dipeptide_repeats_protein-like_[Amyelois_transitella]

Location

Bomo_Chr21(-):7045473-7050043      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.664

CDS

ATGCTAAAGAAACGCCAAGAGGCCGAACGTCTTGCTGCCGCCGGAAAACACAAGTACGAGTACGACAGCGACGAGGACACAACAGACGGTACCTGGGAACATAAATTGCGTGCTAAAGAAATGTTTGCTACGGAGAAGTGGGCCGATGAATTAACACGGCAGGCTGCTGGTAAACATCACATTGGAGATTTCCTGCCTCCGGAGGAATTGAAAAAATTCATGGAAAAATATTCAGCTTTGAAAAATGGCAAAGAGCCAGACCTGAGTGATTATAAAGAGTTCAAGCTGAAGGAAGATAATGTCGGGTTTAAAATGCTTCAGAAGCTTGGATGGAATGAGGGTCAAGGTCTCGGCGTAGAAGGTTCAGGCATCGTGGAACCTATCAACAAGGCGAAACAACCAGTACAGAATCTAGGACTGGGCGCGTCCACTTCGGACGTGGTGTCGCCCGATGACGACGAGTTCGACGCGTACAGGAAACGCATGATGCTCGCTTACAGATTCCGACCTAATCCATTGAATAATCCACGCAGACCATATTATTAA

Protein

MLKKRQEAERLAAAGKHKYEYDSDEDTTDGTWEHKLRAKEMFATEKWADELTRQAAGKHHIGDFLPPEELKKFMEKYSALKNGKEPDLSDYKEFKLKEDNVGFKMLQKLGWNEGQGLGVEGSGIVEPINKAKQPVQNLGLGASTSDVVSPDDDEFDAYRKRMMLAYRFRPNPLNNPRRPYY

Uniprot

H9IW17   A0A2A4IVW2   A0A1E1WH47   A0A1E1WQN0   A0A3S2LJD9   A0A2H1V0I7   + More
A0A212F2A5   A0A194Q8D2   A0A0C9R1T8   A0A182M8S8   A0A2J7PE68   A0A2A3EHH0   A0A023EXE5   A0A151ISQ1   A0A195BPP8   A0A026WY64   A0A0C9QL21   A0A151XGJ6   A0A151ID21   A0A0L7QMY5   Q17P48   A0A310SF69   F4WTS5   A0A2J7PE63   A0A158N9N2   A0A3L8D444   E2BRI8   E2A8Q2   A0A087ZU44   A0A0N0BHX7   A0A2P8Y9C2   A0A154PT82   A0A1Q3FGN9   A0A1S4EW60   A0A1Q3FGS8   A0A1Q3FGI0   A0A2S2NUX6   A0A2H8TNK1   A0A182STW4   A0A182PE56   A0A182ME68   A0A182N596   A0A1B6LPC8   A0A182JNU5   A0A182VQR4   A0A182J3W6   A0A1W4UWR9   W8B6D1   A0A182QZY3   A0A2J7PE73   A0A084WSN3   E0VRM1   A0A2J7PE85   A0A1B6DWE6   A0A182YM39   A0A182TZR7   A0A182RIX8   A0A0R1E4W8   A0A1B6GDR8   Q9VNC5   A0A182LCJ1   A0A1S4GHB5   Q7QBC6   A0A1B0DL25   A0A1B6D514   A0A182HJB2   A0A182UQT2   A0A182XE09   A0A0R1E086   A0A1I8MKY2   A0A1B6DSM7   A0A2M4A9F4   A0A2S2QMG3   T1PDB5   W5J9M3   A0A2M4BBN6   A0A2M4CLE5   A0A2M3Z152   A0A2M4A7M2   A0A2M4A7H8   A0A182FSJ8   A0A2M4BBP9   A0A1I8M0S0   A0A1Y1KTS4   A0A1Y1KSE4   B4GF85   I5APC6   A0A1L8DFK1   A0A1A9X1V6   A0A1Y1KSE7   A0A1Y1KW64   A0A1W4UJA1   B3LZ41   B4PVA8   A0A1Y1KNX1   A0A3B0JVD8   Q9VNC4   A0A1Y1KR84   A0A0B4KF34   B4I412  

Pubmed

19121390    22118469    26354079    24945155    24508170    17510324    + More
21719571    21347285    30249741    20798317    29403074    24495485    24438588    20566863    25244985    17994087    17550304    20966253    12364791    25315136    20920257    23761445    28004739    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867   

EMBL

BABH01006150    BABH01006151    BABH01006152    NWSH01005600    PCG64107.1    GDQN01004766    + More
JAT86288.1    GDQN01001762    JAT89292.1    RSAL01000092    RVE47955.1    ODYU01000122    SOQ34360.1    AGBW02010772    OWR47875.1    KQ459564    KPI99665.1    GBYB01000811    JAG70578.1    AXCM01008055    NEVH01026108    PNF14630.1    KZ288260    PBC30451.1    GAPW01000504    JAC13094.1    KQ981064    KYN09892.1    KQ976428    KYM87815.1    KK107083    EZA60074.1    GBYB01001242    JAG71009.1    KQ982169    KYQ59524.1    KQ977991    KYM98292.1    KQ414868    KOC59983.1    CH477194    EAT48449.1    KQ769378    OAD52869.1    GL888344    EGI62390.1    PNF14631.1    ADTU01009716    ADTU01009717    QOIP01000014    RLU14994.1    GL449965    EFN81680.1    GL437663    EFN70131.1    KQ435737    KOX76884.1    PYGN01000783    PSN40857.1    KQ435066    KZC14320.1    GFDL01008336    JAV26709.1    GFDL01008333    JAV26712.1    GFDL01008385    JAV26660.1    GGMR01008249    MBY20868.1    GFXV01003942    MBW15747.1    AXCM01001496    GEBQ01014623    JAT25354.1    GAMC01013965    GAMC01013962    JAB92593.1    AXCN02000148    PNF14629.1    ATLV01026629    ATLV01026630    KE525415    KFB53227.1    DS235478    EEB16027.1    PNF14628.1    GEDC01015643    GEDC01007305    JAS21655.1    JAS29993.1    CM000160    KRK02714.1    GECZ01009177    JAS60592.1    AY060628    BT024958    AAL28176.1    ABE01188.1    AAAB01008879    EAA08349.5    AJVK01069052    GEDC01016506    JAS20792.1    APCN01002135    KRK02716.1    GEDC01008614    JAS28684.1    GGFK01004074    MBW37395.1    GGMS01009742    MBY78945.1    KA646110    AFP60739.1    ADMH02002074    ETN59555.1    GGFJ01001315    MBW50456.1    GGFL01002004    MBW66182.1    GGFM01001493    MBW22244.1    GGFK01003434    MBW36755.1    GGFK01003435    MBW36756.1    GGFJ01001316    MBW50457.1    GEZM01077964    JAV63105.1    GEZM01077968    JAV63100.1    CH479182    EDW34270.1    CM000070    EIM52811.2    GFDF01008842    JAV05242.1    GEZM01077966    GEZM01077965    GEZM01077961    JAV63110.1    GEZM01077970    GEZM01077963    GEZM01077959    JAV63107.1    CH902617    EDV41915.2    EDW95777.2    GEZM01077962    GEZM01077960    JAV63109.1    OUUW01000008    SPP84372.1    AE014297    AAF52020.2    GEZM01077969    GEZM01077967    JAV63098.1    AGB95668.1    CH480821    EDW54955.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053268    UP000075883    + More
UP000235965    UP000242457    UP000078492    UP000078540    UP000053097    UP000075809    UP000078542    UP000053825    UP000008820    UP000007755    UP000005205    UP000279307    UP000008237    UP000000311    UP000005203    UP000053105    UP000245037    UP000076502    UP000075901    UP000075885    UP000075884    UP000075881    UP000075920    UP000075880    UP000192221    UP000075886    UP000030765    UP000009046    UP000076408    UP000075902    UP000075900    UP000002282    UP000075882    UP000007062    UP000092462    UP000075840    UP000075903    UP000076407    UP000095301    UP000000673    UP000069272    UP000008744    UP000001819    UP000091820    UP000007801    UP000268350    UP000000803    UP000001292   

PRIDE

H9IW17    Q9VNC5    Q9VNC4   

Pfam

PF01585   G-patch        + More
PF01805   Surp

Interpro

IPR000467   G_patch_dom        + More
IPR040169   SUGP1/2       
IPR035967   SWAP/Surp_sf       
IPR000061   Surp       

SUPFAM

SSF109905   SSF109905       

Gene 3D

1.10.10.790    

ProteinModelPortal

H9IW17   A0A2A4IVW2   A0A1E1WH47   A0A1E1WQN0   A0A3S2LJD9   A0A2H1V0I7   + More
A0A212F2A5   A0A194Q8D2   A0A0C9R1T8   A0A182M8S8   A0A2J7PE68   A0A2A3EHH0   A0A023EXE5   A0A151ISQ1   A0A195BPP8   A0A026WY64   A0A0C9QL21   A0A151XGJ6   A0A151ID21   A0A0L7QMY5   Q17P48   A0A310SF69   F4WTS5   A0A2J7PE63   A0A158N9N2   A0A3L8D444   E2BRI8   E2A8Q2   A0A087ZU44   A0A0N0BHX7   A0A2P8Y9C2   A0A154PT82   A0A1Q3FGN9   A0A1S4EW60   A0A1Q3FGS8   A0A1Q3FGI0   A0A2S2NUX6   A0A2H8TNK1   A0A182STW4   A0A182PE56   A0A182ME68   A0A182N596   A0A1B6LPC8   A0A182JNU5   A0A182VQR4   A0A182J3W6   A0A1W4UWR9   W8B6D1   A0A182QZY3   A0A2J7PE73   A0A084WSN3   E0VRM1   A0A2J7PE85   A0A1B6DWE6   A0A182YM39   A0A182TZR7   A0A182RIX8   A0A0R1E4W8   A0A1B6GDR8   Q9VNC5   A0A182LCJ1   A0A1S4GHB5   Q7QBC6   A0A1B0DL25   A0A1B6D514   A0A182HJB2   A0A182UQT2   A0A182XE09   A0A0R1E086   A0A1I8MKY2   A0A1B6DSM7   A0A2M4A9F4   A0A2S2QMG3   T1PDB5   W5J9M3   A0A2M4BBN6   A0A2M4CLE5   A0A2M3Z152   A0A2M4A7M2   A0A2M4A7H8   A0A182FSJ8   A0A2M4BBP9   A0A1I8M0S0   A0A1Y1KTS4   A0A1Y1KSE4   B4GF85   I5APC6   A0A1L8DFK1   A0A1A9X1V6   A0A1Y1KSE7   A0A1Y1KW64   A0A1W4UJA1   B3LZ41   B4PVA8   A0A1Y1KNX1   A0A3B0JVD8   Q9VNC4   A0A1Y1KR84   A0A0B4KF34   B4I412  

PDB

5Y88     E-value=0.000256527,     Score=101

KEGG

101736676    K13096 splicing factor 4 | (RefSeq) formin-like protein 5

GO

GO:0003676   GO:0003723   GO:0006396   GO:0016021   GO:0003924   GO:0006468   GO:0004674   GO:0008270   GO:0045211   GO:0005975   GO:0004553  

PANTHER

PTHR23340  

Length:

181

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.42929

outside

1  -  181

 

 

Pi

247.330163

Theta

192.023341

Tajima's D

1.049309

CLR

0.001931

CSRT

0.67821608919554

Interpretation

Uncertain