Silkworm Genome Informatics Database

Gene

KWMTBOMO12554

Pre Gene Modal

BGIBMGA001449

Annotation

putative_glutaredoxin?_grx_[Operophtera_brumata]

Location

Bomo_Chr21(-):7015769-7031993 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.259

CDS

ATGAAGGAAACATATCCTGACGAAATTATGCTGTGTTTCGTTCAAGGGTTTGGAGATAGTGAACGTGGTTATAGTAAAAGCAGAGAGTGTCCAGATCAAAATAAGCCTCGAACTGACTTGCATTCTAAAAAAAGTGCCAAAAGAGTGTCTCTTCACCTTGAAGAGGCTGACCAGCCAGTTGAATTAAGATCAAAAAAGTCAGAAGGCTTATTGACGGGGAAATCTTTGAGGCTGTCGTCTGGTGGTAGATTTCCGGAAGTGAAAAGGAGCCTGAGTGATAGATTTTCTGTCATTTCTGATGCAAGTAGCAAGAAGCCTGCAAAAGGACTATTGACCATTAGAAAGACTTGGTAA

Protein

MKETYPDEIMLCFVQGFGDSERGYSKSRECPDQNKPRTDLHSKKSAKRVSLHLEEADQPVELRSKKSEGLLTGKSLRLSSGGRFPEVKRSLSDRFSVISDASSKKPAKGLLTIRKTW

Uniprot

H9IW18 A0A2A4JIP4 A0A2H1VFG2 A0A0L7LH15 A0A1E1VY32 A0A3S2LZZ0 + More
A0A194Q3T0 A0A0N0PB29 A0A212FHM8

Pubmed

19121390 26227816 26354079 22118469

EMBL

BABH01006147 NWSH01001265 PCG71937.1 ODYU01002286 SOQ39569.1 JTDY01001218 + More
KOB74501.1 GDQN01011419 JAT79635.1 RSAL01000092 RVE47954.1 KQ459564 KPI99664.1 KQ461068 KPJ09908.1 AGBW02008483 OWR53240.1

Proteomes

UP000005204 UP000218220 UP000037510 UP000283053 UP000053268 UP000053240 + More
UP000007151

PRIDE

H9IW18

Pfam

PF02893 GRAM

Interpro

IPR011993 PH-like_dom_sf + More
IPR004182 GRAM

Gene 3D

2.30.29.30

ProteinModelPortal

H9IW18 A0A2A4JIP4 A0A2H1VFG2 A0A0L7LH15 A0A1E1VY32 A0A3S2LZZ0 + More
A0A194Q3T0 A0A0N0PB29 A0A212FHM8

KEGG

101736541 no KO assigned | (RefSeq) GRAM domain-containing protein 1B

GO

GO:0016021

Length:

117

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.31622

outside

1 - 117

Pi

143.312067

Theta

141.961519

Tajima's D

-0.602412

CLR

0.350512

CSRT

0.220238988050597

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics