SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12549
Annotation
PREDICTED:_protein_giant-lens_isoform_X1_[Bombyx_mori]
Full name
Protein giant-lens      
Alternative Name
Protein argos
Protein strawberry
Location in the cell
Extracellular   Reliability : 2.619 Nuclear   Reliability : 2.09
 

Sequence

CDS
ATGGTTTCGGAGGACGATTTGCCCGATTGCCGACCGCGACAAGTCTGCAGTAAGGTTGACCTCTACGACGCTTCCCAGCCGTGGATAGAGAAGAAATGTCGGTGCTTAGGACACAGGCCGTGTTCGAGCGAACTGTCGGCCGACGACAACCACACGCTGGCCGACAAGACGACCTTGTACAAAACTTGCGAGCCAGTGAAGAGGTTGCCTAAATGCCGTTACTTCAAGGACGCAGCGTGGATCATCTACACGTTTGCCGATACGAACGCGACTCAGCAGATCGTCAACTGTCACTGCCCCAAGTTCTCGGTCACGTACCTGCTAAAGAAGCTACCGTACACGGCATCTAGCGGCGAACAAGGGAACCAGTACCAGTTTGGTTGCTCACCACAAAGCAGGCTTCGTTGCTCAAGGAAGGAGCCTTGTAAGTTGTTCAGCGCGAGACGACGTCACGAGCAGATCGACGAAGTCAACGCCAATACCATCTGCCAGTGTCCAAGGGACCACAGCTGCCCTAGGCATCACACAGAGCCCGGAGTCCTCCCGGGAATCACGTACGCTTCAGAAGACATCCGTACGTACCACGGTTACTGCATGCAGGAACCACCCCCGGATACCTTCAGATTCGTCGGAGATAAAGATTGA
Protein
MVSEDDLPDCRPRQVCSKVDLYDASQPWIEKKCRCLGHRPCSSELSADDNHTLADKTTLYKTCEPVKRLPKCRYFKDAAWIIYTFADTNATQQIVNCHCPKFSVTYLLKKLPYTASSGEQGNQYQFGCSPQSRLRCSRKEPCKLFSARRRHEQIDEVNANTICQCPRDHSCPRHHTEPGVLPGITYASEDIRTYHGYCMQEPPPDTFRFVGDKD

Summary

Description
Regulates cell determination; development of ommatidia and optic lobe. Is a signaling molecule involved in the process of axon pathfinding in the eye. Part of the Ras pathway regulating programmed cell death in pupal eyes; activated by lozenge (lz). Antagonist for the Egfr receptor (gurken). Inhibits Egfr signaling without interacting directly with the receptor, but instead by sequestering the Egfr-activating ligand spitz (spi).
Subunit
Interacts with spi.
Keywords
3D-structure   Complete proteome   Developmental protein   Disulfide bond   Glycoprotein   Reference proteome   Repeat   Secreted   Sensory transduction   Signal   Vision  
Feature
chain  Protein giant-lens
EMBL
ODYU01008906    SOQ52898.1    NWSH01000166    PCG78870.1    JTDY01001538    KOB73619.1    + More
RSAL01000250    RVE43491.1    GAIX01004610    JAA87950.1    KQ461068    KPJ09904.1    KQ459564    KPI99660.1    AGBW02008483    OWR53245.1    GBBI01002364    JAC16348.1    NEVH01002988    PNF41101.1    DS235750    EEB16297.1    GECZ01026594    GECZ01011682    GECZ01007325    JAS43175.1    JAS58087.1    JAS62444.1    GEDC01027594    JAS09704.1    KK854107    PTY11399.1    GFXV01005798    MBW17603.1    KQ971307    EFA11599.2    ABLF02037400    QCYY01003689    ROT62422.1    SAUD01022974    RXG56938.1    APGK01036840    KB740943    KB632399    ENN77534.1    ERL94873.1    PYGN01000568    PSN44112.1    LJIJ01000015    ODN05818.1    GEZM01016435    JAV91275.1    KK107260    QOIP01000001    EZA54212.1    RLU26519.1    KQ435737    KOX76897.1    GL438827    EFN68317.1    KQ414868    KOC59973.1    LBMM01008336    KMQ88963.1    GL449669    EFN82247.1    GL766449    EFZ15187.1    NCKV01000388    RWS30760.1    KQ977510    KYN02256.1    GL888628    EGI58737.1    KQ981713    KYN37335.1    KQ979814    KYN19024.1    KQ976461    KYM84700.1    ABLF02026414    NCKU01000721    RWS14435.1    KQ982169    KYQ59477.1    HACA01001253    CDW18614.1    GBYB01007338    JAG77105.1    JXJN01009171    JRES01001060    KNC25927.1    CCAG010002713    CCAG010002714    CCAG010002715    CCAG010002716    CCAG010002717    GDHF01003383    JAI48931.1    GBXI01004387    JAD09905.1    CH902618    EDV40475.1    GAKP01007877    JAC51075.1    CH954178    KQS44096.1    KA648338    AFP62967.1    CM002912    KMZ00056.1    CH480815    EDW41763.1    EDV52082.2    AF038405    AAB92420.1    CP012525    ALC43986.1    ALC44844.1    X65161    M91381    S55367    AE014296    AY122224    CM000159    EDW94843.2    GAMC01007034    JAB99521.1    CH479203    EDW30373.1    OUUW01000012    SPP87100.1    CH379070    EAL30081.2    CAEY01000468    AB089249    BAC56702.1    CH940647    EDW68594.2    CH963847    EDW73322.2    NNAY01000309    OXU29314.1    KK116743    KFM68645.1    CH916366    EDV95781.1    CH933816    EDW17369.1    MWRG01008867    PRD27410.1    MNPL01000074    OQR80362.1    GEFH01001288    JAP67293.1    KK122540    KFM82966.1    MTYJ01000100    OQV14694.1    JXLN01011300    KPM07071.1    BDGG01000015    GAV07634.1    BDGG01000003    GAU96855.1   
Pfam
PF11581   Argos
Interpro
IPR021633   Argos        + More
IPR020891   UPF0758_CS       
PDB
3CGU     E-value=1.67971e-56,     Score=552

Ontologies

Topology

Subcellular location
Secreted  
Length:
214
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00244
Exp number, first 60 AAs:
0
Total prob of N-in:
0.03732
outside
1  -  214
 
 

Population Genetic Test Statistics

Pi
136.094905
Theta
180.495375
Tajima's D
-0.861204
CLR
186.933195
CSRT
0.164591770411479
Interpretation
Uncertain
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