Gene

KWMTBOMO12546

Annotation

PREDICTED:_flocculation_protein_FLO11_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr21(-):6799403-6803453      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.897 Mitochondrial   Reliability : 1.234

CDS

ATGCTGGTGACGGTGCCTTTACCAGCAGGATCGACTTCGGTGCTGGCTAAGCCAACAAAGTATCACTATTATCCTCACAATCAACATATCTATTTGCTACCAGAATGCGCTATTCAACAGGTATGCAACGCTGTATACGTGAGATTGAATTACACGCAGCCGCTCTGTGCGTGCCCGGCCCGTTACCGTGATCCGTGCTCGGCCAGTCTCAACGCTGACGATCTGCATACAACTCGGCTCGTTACCGATTCCAAAAAGAAGTTTGCTAATAAAGCAGTTACCCTCGTTAAGACCTGTGAAGCGGTCTCCGAGATAAGGGAATGCCGTGTCCCGAAGGACTGGTCGTTGATGGCGTTGCAGAACATTAGAACGGGAAAATCGCACTACCTGGTCATCTGTAGATGTCCTAACAACTACATACTAGAAGGGCCCATTTCACACGAGCAACCAACGTACGCATCCGTTCCCGGTATCAGGGTTTACGGTATGATGTGTGTTCCTGTAACTACAACAGCCTACCATACCGGATTATACAATCGCTACACTGGAGTACAAAGCAGCACGGTCGGTTATAAAGTGGACTATTCGCAGCCCAATTCATATTTGAACAAGCCAATCTATAACAGATATCCCGCCAATCCGTATCCAGAAACTAATTTCTACAACAGAAGATCCCGAGTGGCCAGAATGAGAAGAGCAGCCACATACCCACCATTCCCTTGGTACAAAGTTTTAGAATTAGCGAGATCATTGCATTGGATTTAG

Protein

MLVTVPLPAGSTSVLAKPTKYHYYPHNQHIYLLPECAIQQVCNAVYVRLNYTQPLCACPARYRDPCSASLNADDLHTTRLVTDSKKKFANKAVTLVKTCEAVSEIRECRVPKDWSLMALQNIRTGKSHYLVICRCPNNYILEGPISHEQPTYASVPGIRVYGMMCVPVTTTAYHTGLYNRYTGVQSSTVGYKVDYSQPNSYLNKPIYNRYPANPYPETNFYNRRSRVARMRRAATYPPFPWYKVLELARSLHWI

Uniprot

A0A212FHQ7   A0A2H1V2U1   A0A2A4K4P3   A0A437AZ59   A0A0N1INI5   A0A194Q2U6   + More
A0A0L7L9N1   A0A087ZU65   A0A0N0BI11   A0A151JV30   A0A2S2QU72   J9KZA3   E9HDK6   A0A0P5LND4   A0A0P6CN96   A0A0P5C4U1   A0A0P5HIX6   A0A0P5JF10   A0A0P5XB96   A0A0L7QMU3   A0A0P4YVH2   A0A0P5IN80   A0A0P5REQ1   A0A0P6FHY8   A0A0P5JBZ6   A0A0P5VCK0   A0A0P4YSR1   A0A0P5MWB8   A0A0P6I7W5   A0A0P5EID7   A0A0P5IJI4   A0A0P5F4T5   A0A0P5YN19   A0A0P5UZ60   A0A0N8AY31   A0A0P5Q4K3   A0A0P5R0Q8   A0A0P5QED6   A0A0P6HJ04   A0A0P6DA06   A0A0N8CM50   A0A0P6F470   A0A0P5Y5A1   A0A0P5XRT1   A0A0N8CGD0   A0A0P5E9N5   A0A0P5ZZQ2  

Pubmed

22118469    26354079    26227816    21292972   

EMBL

AGBW02008483    OWR53247.1    ODYU01000418    SOQ35157.1    NWSH01000166    PCG78878.1    + More
RSAL01000250    RVE43490.1    KQ461068    KPJ09902.1    KQ459564    KPI99658.1    JTDY01002105    KOB72099.1    KQ435737    KOX76898.1    KQ981713    KYN37336.1    GGMS01011479    MBY80682.1    ABLF02037399    GL732624    EFX70162.1    GDIQ01191861    JAK59864.1    GDIQ01090107    JAN04630.1    GDIP01175587    JAJ47815.1    GDIQ01249506    JAK02219.1    GDIQ01200570    JAK51155.1    GDIP01086848    JAM16867.1    KQ414868    KOC59972.1    GDIP01223043    JAJ00359.1    GDIQ01254141    GDIQ01210368    GDIQ01052330    JAK41357.1    GDIQ01111140    JAL40586.1    GDIQ01059514    JAN35223.1    GDIQ01271053    GDIQ01268063    GDIQ01222358    GDIQ01209116    GDIQ01207869    JAK43856.1    GDIP01101795    JAM01920.1    GDIP01227688    LRGB01000781    JAI95713.1    KZS15991.1    GDIQ01172825    JAK78900.1    GDIQ01034123    JAN60614.1    GDIQ01271002    JAJ80722.1    GDIQ01212612    GDIQ01192918    GDIQ01128443    GDIQ01097205    JAK39113.1    GDIQ01265789    JAJ85935.1    GDIP01055564    JAM48151.1    GDIP01107354    JAL96360.1    GDIQ01231611    JAK20114.1    GDIQ01119492    JAL32234.1    GDIQ01107145    JAL44581.1    GDIQ01136638    JAL15088.1    GDIQ01042023    JAN52714.1    GDIP01004022    JAM99693.1    GDIP01118247    JAL85467.1    GDIQ01054077    JAN40660.1    GDIP01062806    JAM40909.1    GDIP01070254    JAM33461.1    GDIP01134407    JAL69307.1    GDIP01144706    JAJ78696.1    GDIP01049645    JAM54070.1   

Proteomes

UP000007151    UP000218220    UP000283053    UP000053240    UP000053268    UP000037510    + More
UP000005203    UP000053105    UP000078541    UP000007819    UP000000305    UP000053825    UP000076858   

Pfam

PF01498   HTH_Tnp_Tc3_2        + More
PF13358   DDE_3

Interpro

IPR038717   Tc1-like_DDE_dom        + More
IPR002492   Transposase_Tc1-like       

ProteinModelPortal

A0A212FHQ7   A0A2H1V2U1   A0A2A4K4P3   A0A437AZ59   A0A0N1INI5   A0A194Q2U6   + More
A0A0L7L9N1   A0A087ZU65   A0A0N0BI11   A0A151JV30   A0A2S2QU72   J9KZA3   E9HDK6   A0A0P5LND4   A0A0P6CN96   A0A0P5C4U1   A0A0P5HIX6   A0A0P5JF10   A0A0P5XB96   A0A0L7QMU3   A0A0P4YVH2   A0A0P5IN80   A0A0P5REQ1   A0A0P6FHY8   A0A0P5JBZ6   A0A0P5VCK0   A0A0P4YSR1   A0A0P5MWB8   A0A0P6I7W5   A0A0P5EID7   A0A0P5IJI4   A0A0P5F4T5   A0A0P5YN19   A0A0P5UZ60   A0A0N8AY31   A0A0P5Q4K3   A0A0P5R0Q8   A0A0P5QED6   A0A0P6HJ04   A0A0P6DA06   A0A0N8CM50   A0A0P6F470   A0A0P5Y5A1   A0A0P5XRT1   A0A0N8CGD0   A0A0P5E9N5   A0A0P5ZZQ2  

PDB

3CGU     E-value=0.00121077,     Score=97

KEGG

101736150    no KO assigned | (RefSeq) flocculation protein FLO11

GO

Length:

254

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.13295

Exp number, first 60 AAs:

0.00762

Total prob of N-in:

0.00599

outside

1  -  254

 

 

Pi

146.378418

Theta

170.128267

Tajima's D

-0.58619

CLR

0.738878

CSRT

0.226588670566472

Interpretation

Uncertain