Gene

KWMTBOMO12541

Pre Gene Modal

BGIBMGA001545

Annotation

PREDICTED:_hemicentin-2-like_[Bombyx_mori]

Location

Bomo_Chr21(-):6499304-6502663      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.353

CDS

ATGTTCATTTTGAAGGCTGTCAAAGCAAATACTCCTGAAGCAAACAATATAGGTTTGGTGTCGTGGATTCGGAAACGGGATTTGCACATACTAACCGTCGGCGTGCACACGTATAGCAGCGACGCGAGATTCGCGGCCCTACACACGGACGGGTCAGACGAATGGACTTTACGCGTCGCCCCAGCGCAGCCGAGAGACTCCGGCTCGTATGAATGTCAAGTGTCCACTGAACCGAAAATAAGCCTTTCTTTTAGGCTCACAGTTGTCGTATCAAAGGCAGAAATACTGTCGGGACCAGAACTCTTTGTGCGAGCCGGGTCCGACATCAATCTGACATGTATCGCTAGACATGCCCCAGATCCGCCAAGGTAA

Protein

MFILKAVKANTPEANNIGLVSWIRKRDLHILTVGVHTYSSDARFAALHTDGSDEWTLRVAPAQPRDSGSYECQVSTEPKISLSFRLTVVVSKAEILSGPELFVRAGSDINLTCIARHAPDPPR

Uniprot

A0A2H1VFR0   A0A2A4JRH3   H9IWB4   A0A212ELK7   A0A3S2LUX2   A0A2H1WDR3   + More
A0A2A4JM26   A0A212F480   A0A0N1IP48   A0A194Q4T7   A0A1B0FNB0   A0A1B0AJ69   A0A182YHY9   A0A1A9UWE0   A0A1A9WJ22   A0A0L0C3D7   A0A1I8MR61   A0A1I8QBZ1   W8BEW6   A0A1Y9J0M5   A0A1S4GBG5   A0A336KD98   Q7PX67   A0A182QLK4   A0A1Y9IVC5   A0A2P8YWI1   A0A1J1IMB4   A0A1Y9IS36   A0A182IYA3   Q179I1   A0A2J7PVA2   A0A182H4P8   A0A084W049   A0A182GLY2   A0A182YQ25   A0A182T454   A0A182J1H6   W5J598   A0A182FS04   A0A3Q0JLL4   A0A182TGW3   B0WFL2   A0A1B6MCG7   D6WKJ3   Q7PUC4   A0A182RA57   A0A182NQP9   A0A182KAT0   Q294Z8   A0A182PRS9   B4KDZ6   A0A3B0KP62   B4NAW4   Q5U198   B4JUP6   Q59DX6   B4M5D4   B3P4J7   A0A1W4WDJ3   A0A0M4EP47   B4PM67   B4QU29   A0A182HKE1   A0A182X9F5   A0A1J1IH72   B4HI17   A0A1S4GBB1   A0A182VFY5   A0A1Y9IVK1   A0A224XKD3   T1I4D7   A0A182MCL2   A0A182QP59   A0A2S2R2Z7   J9L9Q8   A0A2H8U2T4   A0A088ARL1   B3M0X9   A0A084W055   B4GME3   A0A0C9PJB4   A0A195FFZ1   A0A195DUW5   E2AIN0   A0A151XIL3   A0A026WXN1   A0A0K8W5Q0   K7J0F9   A0A1I8NCT4   A0A034WNE9   F4WN38   A0A2A3E2L8   A0A0M3QXG1   B4M5D3   B4JUP5   E2C4Z5   A0A0A1WHJ4   W8BV78   B4KDZ5   A0A1I8PJB7  

Pubmed

19121390    22118469    26354079    25244985    26108605    25315136    + More
24495485    12364791    29403074    17510324    26483478    24438588    20920257    23761445    18362917    19820115    15632085    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    30467080    17550304    20798317    24508170    20075255    25348373    21719571    25830018   

EMBL

ODYU01002335    SOQ39700.1    NWSH01000717    PCG74635.1    BABH01006318    AGBW02014033    + More
OWR42374.1    RSAL01000006    RVE54304.1    ODYU01007970    SOQ51191.1    NWSH01001012    PCG73135.1    AGBW02010425    OWR48539.1    KQ460622    KPJ13511.1    KQ459585    KPI98420.1    CCAG010016377    JRES01000953    KNC26850.1    GAMC01006680    JAB99875.1    AAAB01008987    UFQS01000083    UFQT01000083    SSW99060.1    SSX19442.1    EAA01782.5    AXCN02001506    AXCN02001507    AXCN02001508    PYGN01000321    PSN48575.1    CVRI01000051    CRK99609.1    CH477349    EAT42909.1    NEVH01020980    PNF20251.1    JXUM01109976    JXUM01109977    KQ565370    KXJ71043.1    ATLV01019088    ATLV01019089    KE525262    KFB43593.1    JXUM01073826    JXUM01073827    JXUM01073828    KQ562797    KXJ75108.1    ADMH02002101    ETN59156.1    DS231918    EDS26280.1    GEBQ01006398    JAT33579.1    KQ971342    EFA03572.1    EAA01771.6    CM000070    EAL28814.2    CH933806    EDW16017.1    OUUW01000014    SPP88409.1    CH964232    EDW80928.2    BT015994    AAV36879.1    CH916374    EDV91216.1    AE014297    BT057996    AAX52946.2    ACM16706.1    CH940652    EDW59845.1    CH954181    EDV49512.1    CP012526    ALC45810.1    CM000160    EDW96933.1    CM000364    EDX13360.1    APCN01000826    CRK99597.1    CH480815    EDW42599.1    GFTR01003489    JAW12937.1    ACPB03003817    ACPB03003818    ACPB03003819    AXCM01000701    GGMS01015142    MBY84345.1    ABLF02039845    ABLF02039849    ABLF02039858    ABLF02039860    GFXV01008073    MBW19878.1    CH902617    EDV43208.2    ATLV01019091    KFB43599.1    CH479185    EDW38017.1    GBYB01001053    JAG70820.1    KQ981617    KYN39276.1    KQ980322    KYN16668.1    GL439840    EFN66719.1    KQ982080    KYQ60128.1    KK107064    EZA60820.1    GDHF01005940    JAI46374.1    GAKP01001851    JAC57101.1    GL888234    EGI64380.1    KZ288457    PBC25506.1    ALC45809.1    EDW59844.2    EDV91215.1    GL452712    EFN76976.1    GBXI01016449    JAC97842.1    GAMC01009344    GAMC01009343    JAB97211.1    EDW16016.1   

Proteomes

UP000218220    UP000005204    UP000007151    UP000283053    UP000053240    UP000053268    + More
UP000092444    UP000092445    UP000076408    UP000078200    UP000091820    UP000037069    UP000095301    UP000095300    UP000076407    UP000007062    UP000075886    UP000075920    UP000245037    UP000183832    UP000075903    UP000075880    UP000008820    UP000235965    UP000069940    UP000249989    UP000030765    UP000075901    UP000000673    UP000069272    UP000079169    UP000075902    UP000002320    UP000007266    UP000075900    UP000075884    UP000075881    UP000001819    UP000075885    UP000009192    UP000268350    UP000007798    UP000001070    UP000000803    UP000008792    UP000008711    UP000192221    UP000092553    UP000002282    UP000000304    UP000075840    UP000001292    UP000015103    UP000075883    UP000007819    UP000005203    UP000007801    UP000008744    UP000078541    UP000078492    UP000000311    UP000075809    UP000053097    UP000002358    UP000007755    UP000242457    UP000008237   

PRIDE

H9IWB4    Q5U198    Q59DX6   

Pfam

PF00047   ig        + More
PF07679   I-set
PF07686   V-set

Interpro

IPR037448   Zig-8        + More
IPR013151   Immunoglobulin       
IPR013783   Ig-like_fold       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR013098   Ig_I-set       
IPR013106   Ig_V-set       

SUPFAM

SSF48726   SSF48726       

Gene 3D

2.60.40.10    

ProteinModelPortal

A0A2H1VFR0   A0A2A4JRH3   H9IWB4   A0A212ELK7   A0A3S2LUX2   A0A2H1WDR3   + More
A0A2A4JM26   A0A212F480   A0A0N1IP48   A0A194Q4T7   A0A1B0FNB0   A0A1B0AJ69   A0A182YHY9   A0A1A9UWE0   A0A1A9WJ22   A0A0L0C3D7   A0A1I8MR61   A0A1I8QBZ1   W8BEW6   A0A1Y9J0M5   A0A1S4GBG5   A0A336KD98   Q7PX67   A0A182QLK4   A0A1Y9IVC5   A0A2P8YWI1   A0A1J1IMB4   A0A1Y9IS36   A0A182IYA3   Q179I1   A0A2J7PVA2   A0A182H4P8   A0A084W049   A0A182GLY2   A0A182YQ25   A0A182T454   A0A182J1H6   W5J598   A0A182FS04   A0A3Q0JLL4   A0A182TGW3   B0WFL2   A0A1B6MCG7   D6WKJ3   Q7PUC4   A0A182RA57   A0A182NQP9   A0A182KAT0   Q294Z8   A0A182PRS9   B4KDZ6   A0A3B0KP62   B4NAW4   Q5U198   B4JUP6   Q59DX6   B4M5D4   B3P4J7   A0A1W4WDJ3   A0A0M4EP47   B4PM67   B4QU29   A0A182HKE1   A0A182X9F5   A0A1J1IH72   B4HI17   A0A1S4GBB1   A0A182VFY5   A0A1Y9IVK1   A0A224XKD3   T1I4D7   A0A182MCL2   A0A182QP59   A0A2S2R2Z7   J9L9Q8   A0A2H8U2T4   A0A088ARL1   B3M0X9   A0A084W055   B4GME3   A0A0C9PJB4   A0A195FFZ1   A0A195DUW5   E2AIN0   A0A151XIL3   A0A026WXN1   A0A0K8W5Q0   K7J0F9   A0A1I8NCT4   A0A034WNE9   F4WN38   A0A2A3E2L8   A0A0M3QXG1   B4M5D3   B4JUP5   E2C4Z5   A0A0A1WHJ4   W8BV78   B4KDZ5   A0A1I8PJB7  

PDB

6EG0     E-value=2.30095e-40,     Score=409

KEGG

101740017    no KO assigned | (RefSeq) hemicentin-2-like

GO

GO:0016021   GO:0050808   GO:0032589   GO:0007606   GO:0005515   GO:0008270   GO:0006468   GO:0004674   GO:0045211   GO:0005975   GO:0004553  

PANTHER

PTHR23279  

Length:

123

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00319

Exp number, first 60 AAs:

0.00135

Total prob of N-in:

0.21740

outside

1  -  123

 

 

Pi

208.634561

Theta

184.342095

Tajima's D

0.246984

CLR

0.006526

CSRT

0.445077746112694

Interpretation

Uncertain