Gene

KWMTBOMO12534

Pre Gene Modal

BGIBMGA001457

Annotation

PREDICTED:_chromatin_assembly_factor_1_subunit_A_[Bombyx_mori]

Location

Bomo_Chr21(-):6280981-6284174      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.246

CDS

ATGAGATTAGCACCTACAACTAGAGCTGAATTGAGTGATGATAAGAGACATCAGTTGGACAATTTTATTAAGGAACAGAAGTGCAAAGAACATGAACTATATCTTAAATGCCTTAAGGATGGAAACAGTAAACCTCTTTCTACTGGCAAGACCTGGCCTCTAAGTGACAAAGACGATGATGTTATGATTATTGAAGATGAACTGCCACCAATAGATGCAGAAGATGAAATTGTAGCTTGCGACCAAGCACCTCGTGAAAAGCTTAGACCTAAACTATTAAGCTTCCATGAAAACCGACGGCCTCCATATTGGGGAACATGGAGAAAGAAAACCACATTTGTCAAACCTAGAAAGCCATTTGGACAGGATGAGAAACAACTTGACTACGAAGTCGATAGTGATGAGGAATGGGAAGAAGAACAGGAGGGTGAAAGCATTGATGGTAGTGCTGTTGGTAGTGATGACGAGCAAGATGGCGATGAGTATGAAGTAGATAATGAAGTGTTTGTACCGCACGGATATCTTAGTGATGAGGAAGCAACTATGGAAGATGATGACGTACTATCACTGTCCCCTGAAACACAGAAGGCGAGGCTCAAACATTTAGAGGATGAATTTGAAACTGAAATGAAGAAACCAACCGAAAAACTGAAACCACGCATGTATGGCCCACTTTGGGAAAGTAGTGATGGTGGTAAGCCTAGTAAATGCGTTGACGCTTTATGGAATTACTTCTCGAAACTAGCCATGGTTATTGATGATCCAACGCCTTTCTTACAACCTTCGAGTGAACCTGACGAACAAGAGAAAAAAAGAGTTAAGAAAAAGAAACCTGTTAATTCTGAAAACAGTGAACAAAACAATAAATCTGAAAAAAAGAAAAAGCCCAAATCAGAGGAAAAAGAAGGAAAATCGCCTAAAGTTGAAAACAAAAAGATTGGTCCCGAAAAAAAGAATCAGCCTGGCATAAATATGTTTTTAACTAAATTAAAGTCTTCATGA

Protein

MRLAPTTRAELSDDKRHQLDNFIKEQKCKEHELYLKCLKDGNSKPLSTGKTWPLSDKDDDVMIIEDELPPIDAEDEIVACDQAPREKLRPKLLSFHENRRPPYWGTWRKKTTFVKPRKPFGQDEKQLDYEVDSDEEWEEEQEGESIDGSAVGSDDEQDGDEYEVDNEVFVPHGYLSDEEATMEDDDVLSLSPETQKARLKHLEDEFETEMKKPTEKLKPRMYGPLWESSDGGKPSKCVDALWNYFSKLAMVIDDPTPFLQPSSEPDEQEKKRVKKKKPVNSENSEQNNKSEKKKKPKSEEKEGKSPKVENKKIGPEKKNQPGINMFLTKLKSS

Uniprot

H9IW26   A0A437BLF8   A0A2A4K782   A0A0N0PBB8   A0A2H1WD95   A0A194Q3S1   + More
A0A212FH17   A0A0L7KVZ4   A0A1B0GLP8   A0A0A1XTC1   A0A034V6A1   A0A0K8W2X7   A0A0K8W630   A0A0K8TZA6   A0A0K8V218   A0A1B6E528   W8C4T6   A0A1B6EFK6   Q16L92   A0A1B0DMK4   A0A1I8Q3X6   A0A1B6MTG4   A0A0L0C4L2   A0A067R7P4   A0A1Q3EW88   A0A1Q3EWD0   A0A1B6H127   A0A1J1IY94   A0A1I8MLS0   A0A182XNW0   A0A1S4GBK2   A0A1B0BVF3   A0A1A9Y614   A0A182V8N0   J9JRC5   A0A182HK09   A0A1A9VDL1   A0A182PR41   A0A139WAU3   A0A139WAW7   A0A1W4WWR7   A0A182YQL1   A0A1W4X7F0   A0A182NR31   A0A1W4WWT7   A0A1W4X667   A0A182FB95   A0A2S2NVR4   A0A2S2QA13   A0A336L2K3   A0A182QTZ9   A0A084W099   A0A336MLL4   A0A182VWB2   N6TSU2   U5EQB6   U5EW18   W5JTJ5   A0A195F9I8   A0A146LFT6   A0A0A9ZFD3   U4UK60   A0A2M4CH85   A0A182R534   A0A182MFR2   A0A158NFA2   A0A232EIC1   K7J466   Q7PUJ4   A0A1A9WVU9   A0A151WHZ7   A0A1Y1KEG2   A0A1Y1KGX8   A0A1Y1KF04   T1JHB3   A0A023EXX9   A0A026W042   A0A3L8DFG5   A0A069DXM0   E9H2T6   A0A0M4EWV9   A0A0P6FUL8   A0A0P5JBR8   A0A162DEU8   A0A0P4Z612   A0A0P5BCX4   A0A0P6GK51   A0A0N8AUP6   A0A0P5X2T2  

Pubmed

19121390    26354079    22118469    26227816    25830018    25348373    + More
24495485    17510324    26108605    24845553    25315136    12364791    18362917    19820115    25244985    24438588    23537049    20920257    23761445    26823975    25401762    21347285    28648823    20075255    28004739    25474469    24508170    30249741    26334808    21292972   

EMBL

BABH01006068    BABH01006069    BABH01006070    RSAL01000035    RVE51312.1    NWSH01000083    + More
PCG79788.1    KQ461068    KPJ09896.1    ODYU01007878    SOQ51033.1    KQ459564    KPI99654.1    AGBW02008561    OWR53028.1    JTDY01005167    KOB67300.1    AJWK01009757    GBXI01000067    JAD14225.1    GAKP01020126    JAC38826.1    GDHF01006853    JAI45461.1    GDHF01005805    JAI46509.1    GDHF01032899    JAI19415.1    GDHF01019350    JAI32964.1    GEDC01004291    JAS33007.1    GAMC01005289    JAC01267.1    GEDC01000581    JAS36717.1    CH477914    EAT35088.1    AJVK01016861    GEBQ01000757    JAT39220.1    JRES01000911    KNC27308.1    KK852643    KDR19550.1    GFDL01015474    JAV19571.1    GFDL01015469    JAV19576.1    GECZ01001389    JAS68380.1    CVRI01000064    CRL05064.1    AAAB01008987    JXJN01021262    ABLF02018420    APCN01000811    KQ971379    KYB25056.1    KYB25055.1    GGMR01008692    MBY21311.1    GGMS01005362    MBY74565.1    UFQS01000878    UFQT01000878    SSX07440.1    SSX27780.1    AXCN02001479    ATLV01019105    KE525262    KFB43643.1    UFQS01001415    UFQT01001415    SSX10769.1    SSX30451.1    APGK01055861    KB741270    ENN71411.1    GANO01003341    JAB56530.1    GANO01000748    JAB59123.1    ADMH02000120    ETN67692.1    KQ981720    KYN37270.1    GDHC01012200    JAQ06429.1    GBHO01000923    GBHO01000922    JAG42681.1    JAG42682.1    KB632390    ERL94464.1    GGFL01000485    MBW64663.1    AXCM01001186    AXCM01001187    ADTU01013851    ADTU01013852    NNAY01004295    OXU18093.1    AAZX01011384    EAA01417.6    KQ983106    KYQ47440.1    GEZM01088717    GEZM01088713    JAV57995.1    GEZM01088715    JAV57997.1    GEZM01088716    JAV57996.1    JH431527    GBBI01004547    JAC14165.1    KK107519    EZA49423.1    QOIP01000009    RLU19046.1    GBGD01000442    JAC88447.1    GL732587    EFX73839.1    CP012528    ALC50022.1    GDIQ01042503    JAN52234.1    GDIQ01227326    JAK24399.1    LRGB01001663    KZS10844.1    GDIP01221782    JAJ01620.1    GDIP01186275    JAJ37127.1    GDIQ01032265    JAN62472.1    GDIQ01241091    JAK10634.1    GDIP01078533    JAM25182.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053240    UP000053268    UP000007151    + More
UP000037510    UP000092461    UP000008820    UP000092462    UP000095300    UP000037069    UP000027135    UP000183832    UP000095301    UP000076407    UP000092460    UP000092443    UP000075903    UP000007819    UP000075840    UP000078200    UP000075885    UP000007266    UP000192223    UP000076408    UP000075884    UP000069272    UP000075886    UP000030765    UP000075920    UP000019118    UP000000673    UP000078541    UP000030742    UP000075900    UP000075883    UP000005205    UP000215335    UP000002358    UP000007062    UP000091820    UP000075809    UP000053097    UP000279307    UP000000305    UP000092553    UP000076858   

PRIDE

H9IW26   

Pfam

PF12253   CAF1A        + More
PF15539   CAF1-p150_C2

Interpro

IPR022043   CAF1A        + More
IPR029105   CAF1-p150_C2       
IPR020838   DBINO       

ProteinModelPortal

H9IW26   A0A437BLF8   A0A2A4K782   A0A0N0PBB8   A0A2H1WD95   A0A194Q3S1   + More
A0A212FH17   A0A0L7KVZ4   A0A1B0GLP8   A0A0A1XTC1   A0A034V6A1   A0A0K8W2X7   A0A0K8W630   A0A0K8TZA6   A0A0K8V218   A0A1B6E528   W8C4T6   A0A1B6EFK6   Q16L92   A0A1B0DMK4   A0A1I8Q3X6   A0A1B6MTG4   A0A0L0C4L2   A0A067R7P4   A0A1Q3EW88   A0A1Q3EWD0   A0A1B6H127   A0A1J1IY94   A0A1I8MLS0   A0A182XNW0   A0A1S4GBK2   A0A1B0BVF3   A0A1A9Y614   A0A182V8N0   J9JRC5   A0A182HK09   A0A1A9VDL1   A0A182PR41   A0A139WAU3   A0A139WAW7   A0A1W4WWR7   A0A182YQL1   A0A1W4X7F0   A0A182NR31   A0A1W4WWT7   A0A1W4X667   A0A182FB95   A0A2S2NVR4   A0A2S2QA13   A0A336L2K3   A0A182QTZ9   A0A084W099   A0A336MLL4   A0A182VWB2   N6TSU2   U5EQB6   U5EW18   W5JTJ5   A0A195F9I8   A0A146LFT6   A0A0A9ZFD3   U4UK60   A0A2M4CH85   A0A182R534   A0A182MFR2   A0A158NFA2   A0A232EIC1   K7J466   Q7PUJ4   A0A1A9WVU9   A0A151WHZ7   A0A1Y1KEG2   A0A1Y1KGX8   A0A1Y1KF04   T1JHB3   A0A023EXX9   A0A026W042   A0A3L8DFG5   A0A069DXM0   E9H2T6   A0A0M4EWV9   A0A0P6FUL8   A0A0P5JBR8   A0A162DEU8   A0A0P4Z612   A0A0P5BCX4   A0A0P6GK51   A0A0N8AUP6   A0A0P5X2T2  

KEGG

101739324    K10750 chromatin assembly factor 1 subunit A | (RefSeq) chromatin assembly factor 1 subunit A

GO

GO:0033186   GO:0005634   GO:0006334   GO:0003677  

Length:

333

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03741

outside

1  -  333

 

 

Pi

136.257168

Theta

167.002111

Tajima's D

-0.520518

CLR

0.816405

CSRT

0.23798810059497

Interpretation

Uncertain