Silkworm Genome Informatics Database

Gene

KWMTBOMO12529

Pre Gene Modal

BGIBMGA013783

Annotation

AF461149_1_transposase_[Bombyx_mori]

Location

Bomo_Chr21(-):5980277-5981453 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.038

CDS

ATGGAGTGGACGCTTAAAGAAGACCGTGTTGCAGTTATTGCGTTGCATCGTTGCGGTTACGCGCCAATTCAAATTTTTAACATACTGAAAATTTTGAATATAACGAAAAGATTCGTTTATCGTACCATCAAACGATACAATGAAGACTCTAGTGTAGATGACAGGTCAAGAAGTGGTCGCCCTCGGTCTGTTAGGACTCCAGCAGTGATAAAAGCTGTGAAGGCGCGAATTCAAAGAAATCCCAAACAAGAGAGCTACAACAAACAAAATGAAAAGGTGTACGCACACAGTAGTGAAGAAGCGAGCAACCGTATTCCGCGTGTCCAACGAGGTCATTTTCCATCCTCGCTCATGGTATGGTTGGGAGTTTCTTATTGGGGCTTAACAGAGGTACATTTTTGTGAGAAAGATGTAAAAACGAATGCAGTTGTGTATCAAAATACAGTCCTGACGAACCTTGTGGAACCTGTTTCTCATACTATGTTCAATAACAAGCACTGGGTATTCCAACAAGATTCGGCGTCAGCTCATAGAGCGAAGAGCACACAAGACTGGCTGGCGGCGCGTGAAATCGACTTCATCCGGCACGAAGACTGGCCCTCCTCCAGTCCAGATTTGAATCCGTTAGATTACAAGATATGGCAACACTTGGAGGAAAAGGCGTGCTCAAAGCCTCATCCCAATTTGGAGTCACTCAAGACATCCTTGATTAAGGCAGCCGCCGATATTGACATGGACCTCGTTCGTGCTGCGATAGACGACTGGCCGCGCAGATTGAAGGCCTGTATTCAAAATCACGGAGGTCATTTTGAATAA

Protein

MEWTLKEDRVAVIALHRCGYAPIQIFNILKILNITKRFVYRTIKRYNEDSSVDDRSRSGRPRSVRTPAVIKAVKARIQRNPKQESYNKQNEKVYAHSSEEASNRIPRVQRGHFPSSLMVWLGVSYWGLTEVHFCEKDVKTNAVVYQNTVLTNLVEPVSHTMFNNKHWVFQQDSASAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWPRRLKACIQNHGGHFE

Similarity

Belongs to the TGF-beta family.
Belongs to the UDP-glycosyltransferase family.

Uniprot

A0A3S2LTJ6 A0A437AV44 A0A437B2G3 A0A3S2NF68 A0A3S2M6X4 A0A3S2LQG1 + More
A0A437B0M5 A0A3S2LXK8 A0A0C2GWR6 E3M065 E3ND45 A0A183FT12 A0A3P7ZBK4 H3EZH8

Pubmed

18806794

EMBL

RSAL01000012 RVE53510.1 RSAL01000392 RVE41996.1 RSAL01000191 RVE44681.1 + More
RSAL01000063 RVE49524.1 RSAL01000022 RVE52367.1 RSAL01000470 RVE41612.1 RSAL01000236 RVE43715.1 RSAL01000133 RVE46339.1 KN728607 KIH63514.1 DS268420 EFO87874.1 DS268606 EFO93488.1 UZAH01027002 VDO87649.1

Proteomes

UP000283053 UP000008281 UP000050761 UP000005239

Pfam

PF00019   TGF_beta        + More
PF07992   Pyr_redox_2
PF00201   UDPGT
PF13358   DDE_3
PF00292   PAX

Interpro

IPR001839   TGF-b_C        + More
IPR029034   Cystine-knot_cytokine
IPR017948   TGFb_CS
IPR015615   TGF-beta-rel
IPR009057   Homeobox-like_sf
IPR036188   FAD/NAD-bd_sf
IPR023753   FAD/NAD-binding_dom
IPR002213   UDP_glucos_trans
IPR035595   UDP_glycos_trans_CS
IPR036388   WH-like_DNA-bd_sf
IPR038717   Tc1-like_DDE_dom
IPR001523   Paired_dom

SUPFAM

SSF57501   SSF57501        + More
SSF46689   SSF46689
SSF51905   SSF51905

Gene 3D

2.10.90.10 3.50.50.60 1.10.10.10

ProteinModelPortal

A0A3S2LTJ6 A0A437AV44 A0A437B2G3 A0A3S2NF68 A0A3S2M6X4 A0A3S2LQG1 + More
A0A437B0M5 A0A3S2LXK8 A0A0C2GWR6 E3M065 E3ND45 A0A183FT12 A0A3P7ZBK4 H3EZH8

PDB

5CR4 E-value=3.71189e-09, Score=145

KEGG

101740752 no KO assigned | (RefSeq) aldo-keto reductase AKR2E4-like

GO

GO:0005576 GO:0008083 GO:0003677 GO:0006355 GO:0043565 GO:0004674 GO:0008270 GO:0016021 GO:0045211 GO:0005975 GO:0004553

PANTHER

PTHR11848

Subcellular location

Secreted

Length:

271

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

5.05605

Exp number, first 60 AAs:

4.71572

Total prob of N-in:

0.16769

outside

1 - 271

Pi

46.521052

Theta

23.682708

Tajima's D

2.586061

CLR

19.945175

CSRT

0.953702314884256

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree