Gene

KWMTBOMO12522  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001461

Annotation

CRAL-TRIO_domain-containing_protein?_partial_[Manduca_sexta]

Location

Bomo_Chr21(-):5780988-5800513      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.961

CDS

ATGGATAAAGTATCCGACGATGTGAAACAACAAGTAGATCAATTAAAGGAATGGGCGAACCGGCAACCGAATTTGCCCAAGGATATAGAAGACGCAATTCTTTTACAATTCCTACACAGCTGTTACTATGACTTGGACAAGTCGAAGGTCACGTTGGAGTTGTTCTGCGGCATACGTTCGTCGTCACCTGAACTGTTCACCAACAGAGATCCTTCGTCGCCGCCAATGAAGAAGGCTTTGCAAATTCTAAACCTCGCCCACTACGAAATACCGGGAAGAAGATTCGTGTGGATATGGCAATTAAATGACCCGTCTTTGGAAAATTACGACTACGTACAAGATGCCAAGGTTTTCATGTTAACTACGGATTCTTGGTTGCTGAGCGATAAGAAGCTTGAGGAAGACGATATGGTTATAATGGACGTTAAAGATATTTCATTGAAATTTATCACGAAATTCAACGTGTCCGTTGCAAAGAAACTATCGAAATATCAGGAGGACGCAATGCCGATACGTCTGAAGCAGATTCACATTGTGAACGCCCCTCCGTTTGTAGACAAATTGTACGCGTTGTTGAAGCCTTTCATGAAGCAAGAAATTACGAATATGATACATTTCCACACGCCGAATTCACAAACCCTTTACGATTTCGTGAAGAAAGAAGATCTGCCTTCCGACTATGGTGGTACGAGGAAAAGCATGGTGGAATTCAACAAAGATGCTATGGAACTGTTGGAGAGTAGAAAGGAAATTCTCAGTGACGATAATCTGTGGAGAGTCGAGAAGAAATCGAAGAACAAAAATGAATTTTCATCTGATGTCGGATCGTTCCGAACTCTTGCCATAGATTAA

Protein

MDKVSDDVKQQVDQLKEWANRQPNLPKDIEDAILLQFLHSCYYDLDKSKVTLELFCGIRSSSPELFTNRDPSSPPMKKALQILNLAHYEIPGRRFVWIWQLNDPSLENYDYVQDAKVFMLTTDSWLLSDKKLEEDDMVIMDVKDISLKFITKFNVSVAKKLSKYQEDAMPIRLKQIHIVNAPPFVDKLYALLKPFMKQEITNMIHFHTPNSQTLYDFVKKEDLPSDYGGTRKSMVEFNKDAMELLESRKEILSDDNLWRVEKKSKNKNEFSSDVGSFRTLAID

Uniprot

H9IW30   A0A0S2Z3M7   A0A2A4JMB1   A0A2H4RMV2   A0A1E1WIG6   A0A2A4JN90   + More
A0A3S2NFV8   A0A212F142   A0A2H4RMQ7   A0A194RPE5   I4DK14   A0A194PYI0   A0A437B7K5   A0A1E1WLG4   A0A0L7KMX3   D6W9C3   A0A0N1IE49   A0A194Q087   I4DNH4   A0A0S2Z365   I4DKQ6   A0A194Q4S6   I4DKQ5   A0A2H4RMS2   S4PL30   A0A2A4JM74   A0A0S2Z396   A0A212FD39   H9JEQ6   A0A3S2NWM5   A0A2H4RMU3   A0A2H4RMW1   H9IW31   A0A3S2THW5   A0A0N1PG26   A0A2H1WC89   A0A2H1W9M6   A0A212FD20   U4UHT5   A0A2A4JN26   A0A1Y1LMD7   I4DRD0   A0A023F9V9   A0A2H4RMQ4   A0A0P4VRB9   R4G5W8   A0A1B6DYJ3   A0A2H1W9W6   A0A224XHT0   A0A1W4X5F9   A0A1B6LD20   A0A1W4VFQ6   A0A1B6KYX9   A0A1Y1JXE4   A0A0L0CKW7   T1HQM6   A0A1Y1L4D8   Q16X09   A0A1E1WH83   B4I0C0   A0A1S4FLA7   Q9W408   B3NXR4   B4PYR4   A0A2M4CTS7   B3MRW5   A0A2J7PS36   A0A0P8XK66   A0A182VRB8   A0A182FR04   A0A2P8XI41   A0A336LQI6   Q7QCW6   A0A2M4BVM6   A0A182JQF5   A0A067R4X7   A0A182MSW7   B4M791   A0A182RPL0   A0A182Q2B4   A0A182PSQ0   A0A0S2Z2V2   A0A182SVF8   A0A182VFB9   A0A182TN82   A0A182LGG4   A0A182HTQ4   D3TNL3   A0A084W7A6   A0A182XHN6   A0A1A9Y1S2   A0A1B0BFT7   A0A1B6GXD7   A0A1B6ISW4   E2A8R2   A0A182N751   A0A1B6JB60  

Pubmed

19121390    25684408    29136137    22118469    26354079    22651552    + More
26227816    18362917    19820115    23622113    23537049    28004739    25474469    27129103    26108605    17510324    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    18057021    29403074    12364791    14747013    17210077    24845553    20966253    20353571    24438588    20798317   

EMBL

BABH01006016    BABH01006017    BABH01006018    KT943547    ALQ33305.1    NWSH01000993    + More
PCG73187.1    MG434652    ATY51958.1    GDQN01004255    JAT86799.1    PCG73188.1    RSAL01000128    RVE46496.1    AGBW02010967    OWR47462.1    MG434608    ATY51914.1    KQ459896    KPJ19382.1    AK401632    BAM18254.1    KQ459585    KPI98392.1    RVE46497.1    GDQN01003191    JAT87863.1    JTDY01008296    KOB64642.1    KQ971312    EEZ98182.1    KQ460622    KPJ13521.1    KPI98409.1    AK402926    BAM19464.1    KT943559    ALQ33317.1    AK401874    BAM18496.1    KPI98410.1    AK401873    BAM18495.1    MG434621    ATY51927.1    GAIX01004245    JAA88315.1    PCG73185.1    KT943551    ALQ33309.1    AGBW02009116    OWR51640.1    BABH01023466    BABH01023467    RVE46498.1    MG434640    ATY51946.1    MG434663    ATY51969.1    BABH01006015    RVE46499.1    KPJ13520.1    ODYU01007570    SOQ50452.1    ODYU01007188    SOQ49747.1    OWR51639.1    KB632216    ERL90171.1    PCG73186.1    GEZM01051567    JAV74799.1    AK405067    BAM20470.1    GBBI01001004    JAC17708.1    MG434607    ATY51913.1    GDKW01002174    JAI54421.1    GAHY01000155    JAA77355.1    GEDC01006573    JAS30725.1    SOQ49746.1    GFTR01004381    JAW12045.1    GEBQ01018603    JAT21374.1    GEBQ01023362    JAT16615.1    GEZM01098136    JAV53982.1    JRES01000262    KNC32891.1    ACPB03026421    GEZM01068032    JAV67250.1    CH477548    EAT39147.1    GDQN01004699    JAT86355.1    CH480819    EDW52951.1    AE014298    AY113341    AAF46152.1    AAM29346.1    CH954180    EDV47365.1    CM000162    EDX01000.1    GGFL01004487    MBW68665.1    CH902622    EDV34520.1    KPU75182.1    NEVH01021939    PNF19141.1    KPU75183.1    PYGN01002057    PSN31652.1    UFQS01000056    UFQT01000056    SSW98755.1    SSX19141.1    AAAB01008859    EAA07769.3    GGFJ01007984    MBW57125.1    KK852693    KDR18315.1    AXCM01000441    CH940653    EDW62658.1    AXCN02000326    KT943557    ALQ33315.1    APCN01000577    EZ423015    ADD19291.1    ATLV01021179    KE525314    KFB46100.1    JXJN01013655    JXJN01013656    JXJN01013657    JXJN01013658    GECZ01002683    JAS67086.1    GECU01017682    JAS90024.1    GL437663    EFN70141.1    GECU01023166    GECU01011302    JAS84540.1    JAS96404.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053240    UP000053268    + More
UP000037510    UP000007266    UP000030742    UP000192223    UP000192221    UP000037069    UP000015103    UP000008820    UP000001292    UP000000803    UP000008711    UP000002282    UP000007801    UP000235965    UP000075920    UP000069272    UP000245037    UP000007062    UP000075881    UP000027135    UP000075883    UP000008792    UP000075900    UP000075886    UP000075885    UP000075901    UP000075903    UP000075902    UP000075882    UP000075840    UP000030765    UP000076407    UP000092443    UP000092460    UP000000311    UP000075884   

PRIDE

H9IW30    H9JEQ6    H9IW31    Q9W408   

Pfam

PF00650   CRAL_TRIO

Interpro

IPR001251   CRAL-TRIO_dom        + More
IPR036865   CRAL-TRIO_dom_sf       
IPR036273   CRAL/TRIO_N_dom_sf       
IPR011074   CRAL/TRIO_N_dom       

SUPFAM

SSF52087   SSF52087        + More
SSF46938   SSF46938       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

H9IW30   A0A0S2Z3M7   A0A2A4JMB1   A0A2H4RMV2   A0A1E1WIG6   A0A2A4JN90   + More
A0A3S2NFV8   A0A212F142   A0A2H4RMQ7   A0A194RPE5   I4DK14   A0A194PYI0   A0A437B7K5   A0A1E1WLG4   A0A0L7KMX3   D6W9C3   A0A0N1IE49   A0A194Q087   I4DNH4   A0A0S2Z365   I4DKQ6   A0A194Q4S6   I4DKQ5   A0A2H4RMS2   S4PL30   A0A2A4JM74   A0A0S2Z396   A0A212FD39   H9JEQ6   A0A3S2NWM5   A0A2H4RMU3   A0A2H4RMW1   H9IW31   A0A3S2THW5   A0A0N1PG26   A0A2H1WC89   A0A2H1W9M6   A0A212FD20   U4UHT5   A0A2A4JN26   A0A1Y1LMD7   I4DRD0   A0A023F9V9   A0A2H4RMQ4   A0A0P4VRB9   R4G5W8   A0A1B6DYJ3   A0A2H1W9W6   A0A224XHT0   A0A1W4X5F9   A0A1B6LD20   A0A1W4VFQ6   A0A1B6KYX9   A0A1Y1JXE4   A0A0L0CKW7   T1HQM6   A0A1Y1L4D8   Q16X09   A0A1E1WH83   B4I0C0   A0A1S4FLA7   Q9W408   B3NXR4   B4PYR4   A0A2M4CTS7   B3MRW5   A0A2J7PS36   A0A0P8XK66   A0A182VRB8   A0A182FR04   A0A2P8XI41   A0A336LQI6   Q7QCW6   A0A2M4BVM6   A0A182JQF5   A0A067R4X7   A0A182MSW7   B4M791   A0A182RPL0   A0A182Q2B4   A0A182PSQ0   A0A0S2Z2V2   A0A182SVF8   A0A182VFB9   A0A182TN82   A0A182LGG4   A0A182HTQ4   D3TNL3   A0A084W7A6   A0A182XHN6   A0A1A9Y1S2   A0A1B0BFT7   A0A1B6GXD7   A0A1B6ISW4   E2A8R2   A0A182N751   A0A1B6JB60  

PDB

3W68     E-value=3.1763e-13,     Score=180

KEGG

101747217    no KO assigned | (RefSeq) alpha-tocopherol transfer protein-like

GO

GO:0005215   GO:0005622   GO:0006810   GO:0016020   GO:0008270   GO:0016021   GO:0045211   GO:0005975   GO:0004553  

Length:

283

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00127

Exp number, first 60 AAs:

0

Total prob of N-in:

0.11259

outside

1  -  283

 

 

Pi

164.671999

Theta

157.137894

Tajima's D

0.033905

CLR

0.17303

CSRT

0.377781110944453

Interpretation

Uncertain