Gene

KWMTBOMO12521  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001461

Annotation

CRAL-TRIO_domain-containing_protein?_partial_[Manduca_sexta]

Location

Bomo_Chr21(-):5768848-5777353      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.322 Mitochondrial   Reliability : 1.594 Nuclear   Reliability : 1.598

CDS

ATGAATTCCGAAATACAAAAGCAACTGACGCTTTTTAGCGAGTGGGTTCGAAATCAACCTCAATTTCCGGAAATACCGGAGAAACTACTGCATCGGTTTTTACATAGTTGCTACTATGACTTGGATAATGCAAAGAGTGCTCTAGAACTTTTTGTTAGTATCAGAAATGAAACACCTGAGCTTTTCACTAATAGAGATCCATTATCGCCGTCGATACAGGAAACTATGAAGATTGTGAAAATGGCAGTTTATGAAACGACGGATAAAAAACATATATGGATTTGGCAGGTCAACGACCCGGGATTCGATCGATTTGAAACTTTACATGATTCTAGATTGTTCTTGCTGACCGCAGACACTTGGTTCTTAACCGATCGTTTGGCTGACGACGACATTGTTATTGTAGACGTTAAGGATTTTAACTATAAATTCATTACTAAGTATAATTCGATTCTCGGCAAAACAATATCGAAATACCAAGGGGGGGCAATGCCGATGCGTTTGAAGCAGATACACGTCATAAATACACCGCTGATAGTCGACAAAATATATTCGTTGTTCAAGCCCCTCCTCAAAAGCGACGTAAAAGAAAAGATACATTTTCACACGCCAAATTCGAACACACTATTCGATTACGTACACAAAGACGACTTACCAAAGGACTTGGGAGGGATCAGAGACAGTCTGGATATCTATACAAAAAAAATGAAAGAAATGATGCTAACGAAACGCGACGTCCTAGCTCGAGATGACCTATGGAGAAAGAACACTGCTAAGCCCGAGGCAGACAATGCGAAAAGCTTTCGTAATCTTGGAATAGACTGA

Protein

MNSEIQKQLTLFSEWVRNQPQFPEIPEKLLHRFLHSCYYDLDNAKSALELFVSIRNETPELFTNRDPLSPSIQETMKIVKMAVYETTDKKHIWIWQVNDPGFDRFETLHDSRLFLLTADTWFLTDRLADDDIVIVDVKDFNYKFITKYNSILGKTISKYQGGAMPMRLKQIHVINTPLIVDKIYSLFKPLLKSDVKEKIHFHTPNSNTLFDYVHKDDLPKDLGGIRDSLDIYTKKMKEMMLTKRDVLARDDLWRKNTAKPEADNAKSFRNLGID

Uniprot

H9IW30   A0A0S2Z3M7   A0A3S2NFV8   A0A2A4JMB1   A0A2A4JN90   A0A212F142   + More
A0A1E1WIG6   A0A2H4RMV2   A0A2H4RMQ7   A0A194RPE5   A0A194PYI0   I4DK14   A0A437B7K5   A0A2H1V8U5   H9JEQ6   D6W9C3   A0A1E1WLG4   I4DNH4   A0A2H4RMS2   A0A194Q087   A0A0N1IE49   U4UHT5   S4PL30   A0A2H4RMW1   A0A2H1W9M6   A0A2H1WC89   A0A2A4JM74   H9IW31   A0A0S2Z396   A0A3S2THW5   A0A0S2Z365   A0A212FD39   R4G5W8   I4DKQ6   A0A2H4RMU3   A0A194Q4S6   A0A224XHT0   A0A0A1WN88   A0A0P4VRB9   A0A1W4VFQ6   I4DKQ5   A0A336LQI6   A0A0L0CKW7   B3MRW5   A0A0P8XK66   A0A1Y1LMD7   B3NXR4   B4PYR4   A0A034WJZ8   B4MSL5   A0A023F9V9   W8BTC1   B4I0C0   A0A0K8UNC0   T1HQM6   Q9W408   B4L5Q3   A0A0S2Z3D7   A0A1B6KMT6   B4M791   A0A0K8UFK4   A0A1B6LD20   A0A1B6KYX9   A0A1J1IE26   A0A146LCG9   A0A0N1PG26   A0A3S2NWM5   B4JNZ7   A0A034WIE7   E0W2C8   H9JTP5   A0A067R4X7   Q29II6   A0A0Q9WG00   A0A3B0JWJ0   A0A2P8XI41   A0A1B6GM42   A0A0N1IU50   A0A1B6K0N3   A0A1Y1L4D8   A0A0L7LMY9   A0A194Q1G6   A0A084W7A6   A0A2J7PS36   I4DRD0   A0A2M4CTS7   A0A212FD20   A0A194R6X1   A0A1B6DYJ3   A0A182FR04   A0A2M4BVM6   Q16X09   A0A0A9YG14   A0A0K8TCH4   A0A146KP30   A0A0A9YHJ0   A0A0A9YEI6   A0A0K8TDH4  

Pubmed

19121390    25684408    22118469    29136137    26354079    22651552    + More
18362917    19820115    23537049    23622113    25830018    27129103    26108605    17994087    18057021    28004739    17550304    25348373    25474469    24495485    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26823975    20566863    24845553    15632085    29403074    26227816    24438588    17510324    25401762   

EMBL

BABH01006016    BABH01006017    BABH01006018    KT943547    ALQ33305.1    RSAL01000128    + More
RVE46496.1    NWSH01000993    PCG73187.1    PCG73188.1    AGBW02010967    OWR47462.1    GDQN01004255    JAT86799.1    MG434652    ATY51958.1    MG434608    ATY51914.1    KQ459896    KPJ19382.1    KQ459585    KPI98392.1    AK401632    BAM18254.1    RVE46497.1    ODYU01001275    SOQ37270.1    BABH01023466    BABH01023467    KQ971312    EEZ98182.1    GDQN01003191    JAT87863.1    AK402926    BAM19464.1    MG434621    ATY51927.1    KPI98409.1    KQ460622    KPJ13521.1    KB632216    ERL90171.1    GAIX01004245    JAA88315.1    MG434663    ATY51969.1    ODYU01007188    SOQ49747.1    ODYU01007570    SOQ50452.1    PCG73185.1    BABH01006015    KT943551    ALQ33309.1    RVE46499.1    KT943559    ALQ33317.1    AGBW02009116    OWR51640.1    GAHY01000155    JAA77355.1    AK401874    BAM18496.1    MG434640    ATY51946.1    KPI98410.1    GFTR01004381    JAW12045.1    GBXI01014317    JAC99974.1    GDKW01002174    JAI54421.1    AK401873    BAM18495.1    UFQS01000056    UFQT01000056    SSW98755.1    SSX19141.1    JRES01000262    KNC32891.1    CH902622    EDV34520.1    KPU75182.1    KPU75183.1    GEZM01051567    JAV74799.1    CH954180    EDV47365.1    CM000162    EDX01000.1    GAKP01004497    GAKP01004496    JAC54455.1    CH963851    EDW75104.1    GBBI01001004    JAC17708.1    GAMC01006332    JAC00224.1    CH480819    EDW52951.1    GDHF01024228    GDHF01010708    JAI28086.1    JAI41606.1    ACPB03026421    AE014298    AY113341    AAF46152.1    AAM29346.1    CH933811    EDW06512.1    KT943549    ALQ33307.1    GEBQ01027209    JAT12768.1    CH940653    EDW62658.1    GDHF01026890    JAI25424.1    GEBQ01018603    JAT21374.1    GEBQ01023362    JAT16615.1    CVRI01000047    CRK98509.1    GDHC01013872    JAQ04757.1    KPJ13520.1    RVE46498.1    CH916371    EDV92440.1    GAKP01004498    JAC54454.1    DS235877    EEB19784.1    BABH01003428    KK852693    KDR18315.1    CH379063    EAL32667.1    KRF80753.1    OUUW01000003    SPP77726.1    PYGN01002057    PSN31652.1    GECZ01006271    GECZ01004148    JAS63498.1    JAS65621.1    KQ435706    KOX80128.1    GECU01002983    JAT04724.1    GEZM01068032    JAV67250.1    JTDY01000521    KOB76812.1    KQ459582    KPI98834.1    ATLV01021179    KE525314    KFB46100.1    NEVH01021939    PNF19141.1    AK405067    BAM20470.1    GGFL01004487    MBW68665.1    OWR51639.1    KQ460878    KPJ11611.1    GEDC01006573    JAS30725.1    GGFJ01007984    MBW57125.1    CH477548    EAT39147.1    GBHO01013034    GBHO01013033    JAG30570.1    JAG30571.1    GBRD01002607    JAG63214.1    GDHC01021597    GDHC01008315    GDHC01002734    JAP97031.1    JAQ10314.1    JAQ15895.1    GBHO01013038    GBHO01013036    JAG30566.1    JAG30568.1    GBHO01013039    GBHO01013035    JAG30565.1    JAG30569.1    GBRD01002606    JAG63215.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000007151    UP000053240    UP000053268    + More
UP000007266    UP000030742    UP000192221    UP000037069    UP000007801    UP000008711    UP000002282    UP000007798    UP000001292    UP000015103    UP000000803    UP000009192    UP000008792    UP000183832    UP000001070    UP000009046    UP000027135    UP000001819    UP000268350    UP000245037    UP000053105    UP000037510    UP000030765    UP000235965    UP000069272    UP000008820   

PRIDE

H9IW30    H9JEQ6    H9IW31    Q9W408    H9JTP5   

Pfam

PF00650   CRAL_TRIO

Interpro

IPR001251   CRAL-TRIO_dom        + More
IPR036865   CRAL-TRIO_dom_sf       
IPR036273   CRAL/TRIO_N_dom_sf       
IPR011074   CRAL/TRIO_N_dom       

SUPFAM

SSF52087   SSF52087        + More
SSF46938   SSF46938       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

H9IW30   A0A0S2Z3M7   A0A3S2NFV8   A0A2A4JMB1   A0A2A4JN90   A0A212F142   + More
A0A1E1WIG6   A0A2H4RMV2   A0A2H4RMQ7   A0A194RPE5   A0A194PYI0   I4DK14   A0A437B7K5   A0A2H1V8U5   H9JEQ6   D6W9C3   A0A1E1WLG4   I4DNH4   A0A2H4RMS2   A0A194Q087   A0A0N1IE49   U4UHT5   S4PL30   A0A2H4RMW1   A0A2H1W9M6   A0A2H1WC89   A0A2A4JM74   H9IW31   A0A0S2Z396   A0A3S2THW5   A0A0S2Z365   A0A212FD39   R4G5W8   I4DKQ6   A0A2H4RMU3   A0A194Q4S6   A0A224XHT0   A0A0A1WN88   A0A0P4VRB9   A0A1W4VFQ6   I4DKQ5   A0A336LQI6   A0A0L0CKW7   B3MRW5   A0A0P8XK66   A0A1Y1LMD7   B3NXR4   B4PYR4   A0A034WJZ8   B4MSL5   A0A023F9V9   W8BTC1   B4I0C0   A0A0K8UNC0   T1HQM6   Q9W408   B4L5Q3   A0A0S2Z3D7   A0A1B6KMT6   B4M791   A0A0K8UFK4   A0A1B6LD20   A0A1B6KYX9   A0A1J1IE26   A0A146LCG9   A0A0N1PG26   A0A3S2NWM5   B4JNZ7   A0A034WIE7   E0W2C8   H9JTP5   A0A067R4X7   Q29II6   A0A0Q9WG00   A0A3B0JWJ0   A0A2P8XI41   A0A1B6GM42   A0A0N1IU50   A0A1B6K0N3   A0A1Y1L4D8   A0A0L7LMY9   A0A194Q1G6   A0A084W7A6   A0A2J7PS36   I4DRD0   A0A2M4CTS7   A0A212FD20   A0A194R6X1   A0A1B6DYJ3   A0A182FR04   A0A2M4BVM6   Q16X09   A0A0A9YG14   A0A0K8TCH4   A0A146KP30   A0A0A9YHJ0   A0A0A9YEI6   A0A0K8TDH4  

PDB

3W68     E-value=1.1273e-09,     Score=149

KEGG

101746915    no KO assigned | (RefSeq) alpha-tocopherol transfer protein-like

GO

GO:0005215   GO:0005622   GO:0006810   GO:0016020   GO:0008270   GO:0016021   GO:0045211   GO:0005975   GO:0004553  

Length:

274

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00315

Exp number, first 60 AAs:

0

Total prob of N-in:

0.07631

outside

1  -  274

 

 

Pi

48.775568

Theta

174.393101

Tajima's D

-1.383428

CLR

199.543824

CSRT

0.0747462626868657

Interpretation

Uncertain