Gene

KWMTBOMO12519  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001511

Annotation

CRAL-TRIO_domain-containing_protein?_partial_[Manduca_sexta]

Location

Bomo_Chr21(+):5724424-5750691      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.447 Mitochondrial   Reliability : 1.562 Nuclear   Reliability : 1.421

CDS

ATGCCTGACCAAGAGATGGTTGAGAACCGTGACCTGGTAGCGATTAAGGACTGGCTGTGTAGACAGCCTCACTTGCCGCACGAAGTTGATGACATTCTCTTGCTTCGATTTCTGAGCAGCGCAAAGTACAGCTTGGAAAAGGCCAAGAAGACCATAGACCTGTTCTTCACCGTCCGCTCTAATGCGCCGGAGCTGTTCTGTAAGAGAGATCCCTGGGCACCCGAGATCAAACGGATCTTTGATGTCACCGACATGCTACCTCTGCCGAACAAAACGAAAGAGAACTACAAAGTGTTCATATATCGTCTGAGCACCACGGATCTGGATCTGTTCAACTTCGTAGACGCCGTTAAGACTTTCTTCATGCTGGCCGATACGAGGCTGACGGAGGACCAGGACGTTCCCGCCGGAGAAGTCCCTATATTCGACTCTGCTAACGTGACCTTGAAGTTCATCGGGAAAATCAATCTCTCGGCGCTTAGAAAATACATGATTTACACACAGGAAGCGATGCCCATACGACTGAAGCAGGTACACGTGATCAATGCTCCTTCGTATATCGGCAAATTGTACGCCATCTGCAAACCCTTCCTCAAGACTGAAGTCGCCAAACTGATTAAATTTCACGAGCCGAACTCCGACACTCTATACAAAGACATTCCACAAGAAATACTGCCTTCAGACTACGGCGGCAAAGCTGGCTCCGTCGAACAAATCAAAAGGGAATGGATTAAGAAGATGGAAGCCAAAAGAGATTGGTTTTTAACAAACGATACGCGCTGGGCGGTCGACGAATCTCAACGGCCCTCCAGTTGTCAGGACGCAAGAGTGGACAAACTCAAAGATCTACCGGGCTCGTTCAGATCGCTCGCTTTGGACTAA

Protein

MPDQEMVENRDLVAIKDWLCRQPHLPHEVDDILLLRFLSSAKYSLEKAKKTIDLFFTVRSNAPELFCKRDPWAPEIKRIFDVTDMLPLPNKTKENYKVFIYRLSTTDLDLFNFVDAVKTFFMLADTRLTEDQDVPAGEVPIFDSANVTLKFIGKINLSALRKYMIYTQEAMPIRLKQVHVINAPSYIGKLYAICKPFLKTEVAKLIKFHEPNSDTLYKDIPQEILPSDYGGKAGSVEQIKREWIKKMEAKRDWFLTNDTRWAVDESQRPSSCQDARVDKLKDLPGSFRSLALD

Uniprot

A0A0S2Z365   A0A0N1IE49   I4DNH4   A0A194Q087   A0A3S2THW5   A0A2A4JM74   + More
A0A2H4RMS2   A0A2H4RMW1   A0A2H1W9M6   A0A2H1WC89   A0A212FD39   H9IW80   A0A0L7L0R8   D6W9C3   A0A1Y1LMD7   A0A1B6DYJ3   A0A1B6LD20   A0A1B6KYX9   U4UHT5   R4G5W8   A0A0P4VRB9   A0A224XHT0   A0A0L0CKW7   A0A023F9V9   T1HQM6   A0A146LCG9   Q16X09   A0A1S4FLA7   W8BTC1   B3NXR4   B4I0C0   B4M791   B4PYR4   B3MRW5   Q9W408   A0A0P8XK66   A0A084W7A6   A0A0Q9WG00   A0A1Q3FPU1   A0A1Q3FPS4   B4MSL5   A0A182VFB9   A0A182VRB8   A0A182HTQ4   A0A182JQF5   A0A182LGG4   A0A182TN82   A0A0A1WN88   A0A182MSW7   A0A182RPL0   Q7QCW6   A0A182IXF0   B4JNZ7   A0A182XHN6   A0A182PSQ0   A0A182Q2B4   A0A3Q0J1Z7   A0A3B0JWJ0   A0A2M4BVM6   A0A2M4CTS7   A0A034WJZ8   A0A182FR04   A0A1W4VFQ6   A0A182SVF8   A0A182N751   A0A182XW48   B4L5Q3   A0A212FBP0   Q29II6   A0A0K8UNC0   A0A2H4RMU2   A0A1J1HR64   E0VHP2   A0A3S2NT85   A0A0K8UFK4   A0A034WIE7   I4DMP5   A0A3S2NHT6   A0A2A4JLK9   A0A0M4EUE2   A0A2H4RMR9   I4DIV6   A0A212FMH3   A0A0S2Z3M7   A0A2W1BQL9   B0WQS7   A0A0S2Z3C6   A0A2H4RMV2   I4DK14   A0A2H4RMQ7   A0A336MFQ7   A0A194PYI0   A0A1E1W993   A0A2H1V2R3   A0A2A4JN64   E0W2C7   A0A2J7Q755   A0A194R296   A0A2H1V2T7   A0A194Q1X2  

Pubmed

25684408    26354079    22651552    29136137    22118469    19121390    + More
26227816    18362917    19820115    28004739    23537049    27129103    26108605    25474469    26823975    17510324    24495485    17994087    17550304    18057021    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24438588    20966253    25830018    12364791    14747013    17210077    25348373    25244985    15632085    20566863    28756777   

EMBL

KT943559    ALQ33317.1    KQ460622    KPJ13521.1    AK402926    BAM19464.1    + More
KQ459585    KPI98409.1    RSAL01000128    RVE46499.1    NWSH01000993    PCG73185.1    MG434621    ATY51927.1    MG434663    ATY51969.1    ODYU01007188    SOQ49747.1    ODYU01007570    SOQ50452.1    AGBW02009116    OWR51640.1    BABH01006015    JTDY01003863    KOB68906.1    KQ971312    EEZ98182.1    GEZM01051567    JAV74799.1    GEDC01006573    JAS30725.1    GEBQ01018603    JAT21374.1    GEBQ01023362    JAT16615.1    KB632216    ERL90171.1    GAHY01000155    JAA77355.1    GDKW01002174    JAI54421.1    GFTR01004381    JAW12045.1    JRES01000262    KNC32891.1    GBBI01001004    JAC17708.1    ACPB03026421    GDHC01013872    JAQ04757.1    CH477548    EAT39147.1    GAMC01006332    JAC00224.1    CH954180    EDV47365.1    CH480819    EDW52951.1    CH940653    EDW62658.1    CM000162    EDX01000.1    CH902622    EDV34520.1    KPU75182.1    AE014298    AY113341    AAF46152.1    AAM29346.1    KPU75183.1    ATLV01021179    KE525314    KFB46100.1    KRF80753.1    GFDL01005425    JAV29620.1    GFDL01005450    JAV29595.1    CH963851    EDW75104.1    APCN01000577    GBXI01014317    JAC99974.1    AXCM01000441    AAAB01008859    EAA07769.3    CH916371    EDV92440.1    AXCN02000326    OUUW01000003    SPP77726.1    GGFJ01007984    MBW57125.1    GGFL01004487    MBW68665.1    GAKP01004497    GAKP01004496    JAC54455.1    CH933811    EDW06512.1    AGBW02009293    OWR51150.1    CH379063    EAL32667.1    GDHF01024228    GDHF01010708    JAI28086.1    JAI41606.1    MG434646    ATY51952.1    CVRI01000020    CRK90535.1    DS235171    EEB12928.1    RSAL01000093    RVE47935.1    GDHF01026890    JAI25424.1    GAKP01004498    JAC54454.1    AK402563    BAM19185.1    RVE47937.1    NWSH01001060    PCG72861.1    CP012528    ALC48685.1    MG434623    ATY51929.1    AK401224    BAM17846.1    AGBW02007651    OWR54931.1    KT943547    ALQ33305.1    KZ150073    PZC74013.1    DS232045    EDS33007.1    KT943552    ALQ33310.1    MG434652    ATY51958.1    AK401632    BAM18254.1    MG434608    ATY51914.1    UFQT01000848    SSX27633.1    KPI98392.1    GDQN01007486    JAT83568.1    ODYU01000400    SOQ35121.1    PCG72852.1    DS235877    EEB19783.1    NEVH01017447    PNF24414.1    KQ460878    KPJ11639.1    ODYU01000399    SOQ35119.1    KQ459582    KPI98994.1   

Proteomes

UP000053240    UP000053268    UP000283053    UP000218220    UP000007151    UP000005204    + More
UP000037510    UP000007266    UP000030742    UP000037069    UP000015103    UP000008820    UP000008711    UP000001292    UP000008792    UP000002282    UP000007801    UP000000803    UP000030765    UP000007798    UP000075903    UP000075920    UP000075840    UP000075881    UP000075882    UP000075902    UP000075883    UP000075900    UP000007062    UP000075880    UP000001070    UP000076407    UP000075885    UP000075886    UP000079169    UP000268350    UP000069272    UP000192221    UP000075901    UP000075884    UP000076408    UP000009192    UP000001819    UP000183832    UP000009046    UP000092553    UP000002320    UP000235965   

PRIDE

H9IW80    Q9W408   

Pfam

PF00650   CRAL_TRIO

Interpro

IPR036273   CRAL/TRIO_N_dom_sf        + More
IPR036865   CRAL-TRIO_dom_sf       
IPR001251   CRAL-TRIO_dom       
IPR011074   CRAL/TRIO_N_dom       

SUPFAM

SSF52087   SSF52087        + More
SSF46938   SSF46938       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

A0A0S2Z365   A0A0N1IE49   I4DNH4   A0A194Q087   A0A3S2THW5   A0A2A4JM74   + More
A0A2H4RMS2   A0A2H4RMW1   A0A2H1W9M6   A0A2H1WC89   A0A212FD39   H9IW80   A0A0L7L0R8   D6W9C3   A0A1Y1LMD7   A0A1B6DYJ3   A0A1B6LD20   A0A1B6KYX9   U4UHT5   R4G5W8   A0A0P4VRB9   A0A224XHT0   A0A0L0CKW7   A0A023F9V9   T1HQM6   A0A146LCG9   Q16X09   A0A1S4FLA7   W8BTC1   B3NXR4   B4I0C0   B4M791   B4PYR4   B3MRW5   Q9W408   A0A0P8XK66   A0A084W7A6   A0A0Q9WG00   A0A1Q3FPU1   A0A1Q3FPS4   B4MSL5   A0A182VFB9   A0A182VRB8   A0A182HTQ4   A0A182JQF5   A0A182LGG4   A0A182TN82   A0A0A1WN88   A0A182MSW7   A0A182RPL0   Q7QCW6   A0A182IXF0   B4JNZ7   A0A182XHN6   A0A182PSQ0   A0A182Q2B4   A0A3Q0J1Z7   A0A3B0JWJ0   A0A2M4BVM6   A0A2M4CTS7   A0A034WJZ8   A0A182FR04   A0A1W4VFQ6   A0A182SVF8   A0A182N751   A0A182XW48   B4L5Q3   A0A212FBP0   Q29II6   A0A0K8UNC0   A0A2H4RMU2   A0A1J1HR64   E0VHP2   A0A3S2NT85   A0A0K8UFK4   A0A034WIE7   I4DMP5   A0A3S2NHT6   A0A2A4JLK9   A0A0M4EUE2   A0A2H4RMR9   I4DIV6   A0A212FMH3   A0A0S2Z3M7   A0A2W1BQL9   B0WQS7   A0A0S2Z3C6   A0A2H4RMV2   I4DK14   A0A2H4RMQ7   A0A336MFQ7   A0A194PYI0   A0A1E1W993   A0A2H1V2R3   A0A2A4JN64   E0W2C7   A0A2J7Q755   A0A194R296   A0A2H1V2T7   A0A194Q1X2  

PDB

3W68     E-value=1.06043e-16,     Score=210

KEGG

101746634    no KO assigned | (RefSeq) alpha-tocopherol transfer protein-like

GO

GO:0016787   GO:0005215   GO:0005622   GO:0006810   GO:0016020   GO:0008270   GO:0016021   GO:0045211   GO:0005975   GO:0004553  

Length:

293

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0195

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04464

outside

1  -  293

 

 

Pi

192.528656

Theta

161.438846

Tajima's D

-0.812476

CLR

0.703121

CSRT

0.173041347932603

Interpretation

Uncertain