Gene

KWMTBOMO12516

Pre Gene Modal

BGIBMGA001510

Annotation

PREDICTED:_DENN_domain-containing_protein_4C_isoform_X4_[Bombyx_mori]

Location

Bomo_Chr21(+):5680144-5685065      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 0.895

CDS

ATGTACATATATAACGAATGTGTCATGTACGACGGAAAGGAGCGTCTAATGGCTGATGCGGAAATGGTTCTCGAGTCGTCGGGCGGTCGTGTTGCCAACGTAAATAACTCAGCAGCGAAAACCTTCATCACGTACAGACGGGCCCACCCCGGCGCCCCCTGCAACGCTTTGGTAGTCGTCGACGTGTGCGTGATAATAGTCAGCAAAGGGGAATGTCCACCTCACGCTTTCTGTATGATCGCGAAGAATTTGAATAAAGGTTTAATGGGCAGCGATGTGTTTTTGTGCTACAAAAAGTCAATGAACCGTCCACCGTTAATCTCATACAAACCAGATGTATTATTCAGGTATCCTGTGACGGATCGTCGCAGCTTAGCATTTCCACCTTCAGTGCCGTTGTTCTGTTTGCCGATGGGCGCGACTTTGGAACTGTGGCCGAACAACGCGGCCTCGCCCAAACCGGTGTTCTCAACGTTCGTTCTGACCGTTGCCGACGCTACCGAAAAGGTACCAAAACCAAACACGTTCGAATACCAACCTTATATCGTATGA

Protein

MYIYNECVMYDGKERLMADAEMVLESSGGRVANVNNSAAKTFITYRRAHPGAPCNALVVVDVCVIIVSKGECPPHAFCMIAKNLNKGLMGSDVFLCYKKSMNRPPLISYKPDVLFRYPVTDRRSLAFPPSVPLFCLPMGATLELWPNNAASPKPVFSTFVLTVADATEKVPKPNTFEYQPYIV

Uniprot

H9IW79   A0A3S2P4L1   A0A1E1WPU4   A0A437B7L1   A0A2A4JDM7   A0A2A4JE38   + More
A0A194PYJ9   A0A212FGU0   A0A0N0PCD2   A0A1B6LX81   A0A0M8ZWA6   A0A154NVZ3   A0A0L7QJX1   A0A1B6BX36   A0A1B6EMR1   A0A1B6FL41   D6W9R2   A0A067QUL7   A0A1Y1NK17   A0A1Y1NG93   A0A195FSQ8   A0A158NA51   A0A195BJ33   F4X1E1   N6TRR5   A0A151WWQ0   A0A195DLP8   A0A3L8DE54   A0A026WRM6   A0A195CUW3   E9IXN7   A0A2J7Q1W2   A0A2J7Q1X7   A0A088ADJ1   A0A2J7Q1W0   U4UAP8   N6UN05   A0A1D2MIC4   A0A232FEC4   E2BUI4   A0A1B0D4P8   T1HWX5   Q2UXN7   A0A034V9H9   E2AH64   A0A226EIW6   A0A0A9WFP5   A0A146KY42   A0A0A9WC26   A0A0C9RPL0   A0A0C9RLE7   J9JZA0   A0A0Q9WCA2   A0A2S2NCN4   A0A2S2PSK6   B4M1K8   A0A0Q9WN08   B4L4U9   B4JN41   E9GHR1   A0A182IYU6   W8BEQ5   W8AIA2   A0A182PR40   W8AU61   A0A0N7ZIY5   A0A0P5SUF2   A0A0P6CZL5   A0A2P8YZV0   A0A182FSM4   A0A0P5HL18   A0A0P5T505   A0A182HK08   A0A0P5STT4   A0A0N8CDR0   A0A0P4ZHM3   A0A2S2QCC2   A0A3Q0J5Q2   A0A182L884   A0A0P5Z958   A0A0P5T9S8   A0A0P4YWG5   A0A182NR33   A0A2M4CS33   A0A0M3QZU4   A0A182XPK4   A0A0N8ABS2   A0A0P5YFE7   A0A0A1X4U1   Q7PWX7   A0A2M4CS61   A0A2M4CSA7   A0A0N8A3M2   A0A0P5Y6A9   B0X8U9   A0A0K8UU80   A0A0P5PXW7   A0A0P5GWA8   A0A0P5JSG0   W4VRF4  

Pubmed

19121390    26354079    22118469    18362917    19820115    24845553    + More
28004739    21347285    21719571    23537049    30249741    24508170    21282665    27289101    28648823    20798317    16387875    25348373    25401762    26823975    17994087    18057021    21292972    24495485    29403074    20966253    25830018    12364791    14747013    17210077   

EMBL

BABH01006012    BABH01006013    BABH01006014    BABH01006015    RSAL01000478    RVE41589.1    + More
GDQN01002052    JAT89002.1    RSAL01000128    RVE46501.1    NWSH01001922    PCG69664.1    PCG69663.1    KQ459585    KPI98412.1    AGBW02008606    OWR52923.1    KQ460622    KPJ13518.1    GEBQ01011732    JAT28245.1    KQ435824    KOX72237.1    KQ434770    KZC03817.1    KQ415041    KOC58884.1    GEDC01031783    JAS05515.1    GECZ01030550    JAS39219.1    GECZ01018875    JAS50894.1    KQ971312    EEZ98120.2    KK853392    KDR07911.1    GEZM01003066    JAV96945.1    GEZM01003067    JAV96944.1    KQ981305    KYN42939.1    ADTU01009976    KQ976455    KYM85119.1    GL888529    EGI59736.1    APGK01006246    KB736662    ENN83169.1    KQ982686    KYQ52332.1    KQ980734    KYN13803.1    QOIP01000009    RLU18433.1    KK107119    EZA58695.1    KQ977276    KYN04473.1    GL766762    EFZ14623.1    NEVH01019377    PNF22575.1    PNF22573.1    PNF22572.1    KB631984    ERL87686.1    APGK01006577    KB736835    ENN83125.1    LJIJ01001157    ODM92746.1    NNAY01000337    OXU29101.1    GL450687    EFN80642.1    AJVK01024783    ACPB03012299    AM040167    CAJ12157.1    GAKP01019778    JAC39174.1    GL439483    EFN67181.1    LNIX01000004    OXA56486.1    GBHO01038261    JAG05343.1    GDHC01017285    JAQ01344.1    GBHO01038260    JAG05344.1    GBYB01009106    JAG78873.1    GBYB01009107    GBYB01009110    JAG78874.1    JAG78877.1    ABLF02033092    CH940651    KRF82285.1    GGMR01002352    MBY14971.1    GGMR01019207    MBY31826.1    EDW65562.2    KRF82284.1    CH933810    KRF94110.1    EDW07577.1    KRF94111.1    CH916371    EDV92134.1    GL732545    EFX81009.1    GAMC01018321    JAB88234.1    GAMC01018320    JAB88235.1    GAMC01018322    JAB88233.1    GDIP01240857    JAI82544.1    GDIP01142465    JAL61249.1    GDIQ01086222    JAN08515.1    PYGN01000262    PSN49786.1    GDIQ01226625    JAK25100.1    GDIP01135366    JAL68348.1    APCN01000810    APCN01000811    GDIP01135365    JAL68349.1    GDIP01141767    JAL61947.1    GDIP01213858    JAJ09544.1    GGMS01006088    MBY75291.1    GDIP01047080    JAM56635.1    GDIP01135315    JAL68399.1    GDIP01221659    JAJ01743.1    GGFL01003978    MBW68156.1    CP012528    ALC50023.1    GDIP01162961    JAJ60441.1    GDIP01058480    JAM45235.1    GBXI01013689    GBXI01008416    JAD00603.1    JAD05876.1    AAAB01008987    EAA01213.3    GGFL01003979    MBW68157.1    GGFL01003977    MBW68155.1    GDIP01185761    JAJ37641.1    GDIP01063928    JAM39787.1    DS232504    EDS42705.1    GDHF01022163    JAI30151.1    GDIQ01128910    JAL22816.1    GDIQ01235578    JAK16147.1    GDIQ01220176    JAK31549.1    GANO01003454    JAB56417.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000007151    UP000053240    + More
UP000053105    UP000076502    UP000053825    UP000007266    UP000027135    UP000078541    UP000005205    UP000078540    UP000007755    UP000019118    UP000075809    UP000078492    UP000279307    UP000053097    UP000078542    UP000235965    UP000005203    UP000030742    UP000094527    UP000215335    UP000008237    UP000092462    UP000015103    UP000000311    UP000198287    UP000007819    UP000008792    UP000009192    UP000001070    UP000000305    UP000075880    UP000075885    UP000245037    UP000069272    UP000075840    UP000079169    UP000075882    UP000075884    UP000092553    UP000076407    UP000007062    UP000002320   

PRIDE

H9IW79   

Pfam

PF03455   dDENN        + More
PF02141   DENN
PF03456   uDENN
PF00046   Homeodomain
PF10240   DUF2464

Interpro

IPR005113   uDENN_dom        + More
IPR011990   TPR-like_helical_dom_sf       
IPR023341   MABP       
IPR037516   Tripartite_DENN       
IPR001194   cDENN_dom       
IPR005112   dDENN_dom       
IPR001356   Homeobox_dom       
IPR017970   Homeobox_CS       
IPR009057   Homeobox-like_sf       
IPR002885   Pentatricopeptide_repeat       
IPR018798   MVB12A/B       

SUPFAM

SSF46689   SSF46689       

Gene 3D

1.25.40.10    

CDD

cd00086  homeodomain

ProteinModelPortal

H9IW79   A0A3S2P4L1   A0A1E1WPU4   A0A437B7L1   A0A2A4JDM7   A0A2A4JE38   + More
A0A194PYJ9   A0A212FGU0   A0A0N0PCD2   A0A1B6LX81   A0A0M8ZWA6   A0A154NVZ3   A0A0L7QJX1   A0A1B6BX36   A0A1B6EMR1   A0A1B6FL41   D6W9R2   A0A067QUL7   A0A1Y1NK17   A0A1Y1NG93   A0A195FSQ8   A0A158NA51   A0A195BJ33   F4X1E1   N6TRR5   A0A151WWQ0   A0A195DLP8   A0A3L8DE54   A0A026WRM6   A0A195CUW3   E9IXN7   A0A2J7Q1W2   A0A2J7Q1X7   A0A088ADJ1   A0A2J7Q1W0   U4UAP8   N6UN05   A0A1D2MIC4   A0A232FEC4   E2BUI4   A0A1B0D4P8   T1HWX5   Q2UXN7   A0A034V9H9   E2AH64   A0A226EIW6   A0A0A9WFP5   A0A146KY42   A0A0A9WC26   A0A0C9RPL0   A0A0C9RLE7   J9JZA0   A0A0Q9WCA2   A0A2S2NCN4   A0A2S2PSK6   B4M1K8   A0A0Q9WN08   B4L4U9   B4JN41   E9GHR1   A0A182IYU6   W8BEQ5   W8AIA2   A0A182PR40   W8AU61   A0A0N7ZIY5   A0A0P5SUF2   A0A0P6CZL5   A0A2P8YZV0   A0A182FSM4   A0A0P5HL18   A0A0P5T505   A0A182HK08   A0A0P5STT4   A0A0N8CDR0   A0A0P4ZHM3   A0A2S2QCC2   A0A3Q0J5Q2   A0A182L884   A0A0P5Z958   A0A0P5T9S8   A0A0P4YWG5   A0A182NR33   A0A2M4CS33   A0A0M3QZU4   A0A182XPK4   A0A0N8ABS2   A0A0P5YFE7   A0A0A1X4U1   Q7PWX7   A0A2M4CS61   A0A2M4CSA7   A0A0N8A3M2   A0A0P5Y6A9   B0X8U9   A0A0K8UU80   A0A0P5PXW7   A0A0P5GWA8   A0A0P5JSG0   W4VRF4  

KEGG

101738898    K20163 DENN domain-containing protein 4 | (RefSeq) C-myc promoter-binding protein

GO

GO:0005634   GO:0003677   GO:0016021   GO:0000813   GO:0055037   GO:0005886   GO:0032483   GO:0110011   GO:0110010   GO:0045175   GO:0070831   GO:0042998   GO:0061864   GO:0090630   GO:0097575   GO:0017112   GO:0005516   GO:0045179  

Subcellular location

Nucleus  

Length:

183

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.77058

Exp number, first 60 AAs:

0.08781

Total prob of N-in:

0.26556

outside

1  -  183

 

 

Pi

173.807887

Theta

185.300549

Tajima's D

-0.314612

CLR

0.734271

CSRT

0.28053597320134

Interpretation

Uncertain