SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12515  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001509
Annotation
putative_U3_small_nucleolar_RNA-associated_protein_[Danaus_plexippus]
Full name
1-acyl-sn-glycerol-3-phosphate acyltransferase      
Location in the cell
Cytoplasmic   Reliability : 1.39 Mitochondrial   Reliability : 1.545
 

Sequence

CDS
ATGGCACAAGTCTCGTTCCCCTTTAAAAAAACAAACAAAGCTATATTTAAAAAACCTGCATCAGTTCTTACTCACGATATCATTTACTGGAAAAAACTTGGTCTACCTGTTCTCGTAAAAGAATTCGGTGCTATTGACTATTTAGACTTCAGCCCGGTCGAACCTTACTATTTTGCAGCAACATGCTCAGTAAGAGTTCAGGTTTATGATCCGGTCACAAAAGTGGTAGCAAAGAATATTTCAAAGTTTGTTGAAGCTGCTTACGGAGGGTGTTTCAGAGCTGATGGAAGATTATTGGTGGCTGGTAGTGAAGAGGCAGCTGTTAAGCTCTTTGATGTACAATCAAAAAATGTACTTAGAGTTTTTACTGGTCATACAGGCCCTGTCCATAGAACATTCTTCACGAAAGATCAGCTAAAAATAATCAGTTATTCTGATGATAAATCTGTGGGATTATGGGACATATCTACAGAAGAAAGAATAGCAAATTTTAATGAACACACAGACTATATTAGAGCAGGAGCTGCCAGTCCAATTTCTCCAGACATTATTTTATCAGGAAGCTATGACCATACAGTAAAATTATATGACTGCAGATCAAATGAAACTATTATGACAGTAAACCACGGAAGCCCTGTGGAATCTACATTATTTTTACCTTCAGGTGGCATTTTTATTAGTGCTGGAGGTACTGAAATAAAAGTATGGGACATTTTCAATGGTGGGAAACTTTTATCCAATATTTCGCAACACCACAAAACAGTCACAACATTGAGACTAGCTAGCAACAACAGCAGATTAATGTCAGCATCTCTAGACAGACATGTAAAAATATATGACGTATCTACATTCAAAGTTGTGCACAATATAGATTTCCCAAATGCAATATTAAGTATGGCCATATCTGAACATGATGACATTTTAACAGTCGGCATGATTGATGGTATAATTTCTATAAGAAAACGAGAGGAGCCAGTCAGACAATCTGAAAAAAGAAAAAATCTATTAAAATTCATCCCTGATCACACCAGTCAAACAAAAGCGGATACTGTGGAGGTTGCAAATGAAGTGAAAATTAATAAAAAACAGAAACTTCCAGATTGTGATGTCCTTATCAGAAAAATGCAATTCAGCAAAGCACTAACAGTTGTTCTCAGGCCATACATATCTGTGAAATACCCGGAAAAAACTACAGCTGTCATTCAAGAATTGCTTAGAAGAGAAGTTTTAAGAGTAGCCATTGAAAACTTAGAAGAAAAATTTATTGGCCTACTGCTTAAATTCCTTATCTCCAAATTGGGAGAAACAAGGTTTACTAGGACAATTGTTGATGCTACCAATGTTTTCATAGACATATTTGAAGGCAAAATTAACATGTTTTCTCCTGAAAATCTTTACCTTTACAAGTGTTTATTCAAACGTGTAGAATCAGAAATAAAAGTGTGTAAAAGTATAGCTGAACTAGAAGGAGCTATAAACTTAATAATGGCTGGAGCTCAAGTGTCCAATACTGATGTTTATGAACTAAATGACACAATAGCACCCTCTACAAAAGCGCAGAAAGATATTGTGATTGATGTATAA
Protein
MAQVSFPFKKTNKAIFKKPASVLTHDIIYWKKLGLPVLVKEFGAIDYLDFSPVEPYYFAATCSVRVQVYDPVTKVVAKNISKFVEAAYGGCFRADGRLLVAGSEEAAVKLFDVQSKNVLRVFTGHTGPVHRTFFTKDQLKIISYSDDKSVGLWDISTEERIANFNEHTDYIRAGAASPISPDIILSGSYDHTVKLYDCRSNETIMTVNHGSPVESTLFLPSGGIFISAGGTEIKVWDIFNGGKLLSNISQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILTVGMIDGIISIRKREEPVRQSEKRKNLLKFIPDHTSQTKADTVEVANEVKINKKQKLPDCDVLIRKMQFSKALTVVLRPYISVKYPEKTTAVIQELLRREVLRVAIENLEEKFIGLLLKFLISKLGETRFTRTIVDATNVFIDIFEGKINMFSPENLYLYKCLFKRVESEIKVCKSIAELEGAINLIMAGAQVSNTDVYELNDTIAPSTKAQKDIVIDV

Summary

Catalytic Activity
a 1-acyl-sn-glycero-3-phosphate + an acyl-CoA = a 1,2-diacyl-sn-glycero-3-phosphate + CoA
Similarity
Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
Feature
chain  1-acyl-sn-glycerol-3-phosphate acyltransferase
EC Number
2.3.1.51
EMBL
BABH01006010    NWSH01001922    PCG69662.1    ODYU01008263    SOQ51696.1    AGBW02008606    + More
OWR52924.1    GAIX01004194    JAA88366.1    KQ459585    KPI98394.1    KQ459896    KPJ19384.1    RSAL01000128    RVE46502.1    GDQN01003915    JAT87139.1    JTDY01007593    KOB65094.1    AK401633    BAM18255.1    GEZM01016711    JAV91170.1    KQ971311    EEZ98848.1    KQ414599    KOC69773.1    KQ434791    KZC05393.1    NEVH01013278    PNF28959.1    GEDC01015005    JAS22293.1    KK852405    KDR24524.1    GL888292    EGI63118.1    KZ288195    PBC33774.1    ADTU01013477    KQ978625    KYN29597.1    GECL01002231    JAP03893.1    KQ981490    KYN41192.1    KK107064    QOIP01000008    EZA60862.1    RLU19472.1    KQ978501    KYM93436.1    GBBI01003390    JAC15322.1    LJIG01009288    KRT83380.1    KQ982080    KYQ60327.1    GL439118    EFN67794.1    PYGN01000262    PSN49805.1    DS235286    EEB14412.1    KQ764626    OAD54462.1    GL762454    EFZ21314.1    GAMC01011150    JAB95405.1    JRES01000940    KNC27046.1    PNF28960.1    KQ976401    KYM92388.1    ACPB03016411    GL445887    EFN88954.1    GBXI01002762    JAD11530.1    AXCM01001191    APCN01002019    GGFJ01004308    MBW53449.1    GDHF01028933    JAI23381.1    GGFJ01004186    MBW53327.1    GAKP01018551    GAKP01018549    GAKP01018547    GAKP01018545    JAC40403.1    AAAB01008987    EAA01026.4    LBMM01006044    KMQ90986.1    ADMH02002129    ETN58612.1    CH477193    EAT48545.1    GDKW01003027    JAI53568.1    DS231849    EDS36882.1    ATLV01026571    KE525415    KFB53175.1    JXUM01115265    KQ565863    KXJ70589.1    KQ435750    KOX76264.1    GFDL01013481    JAV21564.1    AXCN02000239    GGFK01008600    MBW41921.1    CCAG010019814    GANO01002318    JAB57553.1    UFQT01000006    SSX17401.1    GBHO01002292    GDHC01012853    JAG41312.1    JAQ05776.1    GDHC01020086    JAP98542.1    APGK01057037    KB741277    ENN71254.1    KB630626    ERL83727.1    AJWK01012828    AJWK01012829    AJWK01012830    AJWK01012831    KB631617    ERL84724.1    CH916371    EDV92057.1    CH379063    EAL32296.1    OUUW01000003    SPP78733.1    KB631850    ERL86717.1    CP012528    ALC49528.1    CH933811    EDW06560.1    CH963738    EDW72140.1    GL732561    EFX77656.1    GDIP01214283    LRGB01000781    JAJ09119.1    KZS15958.1    CH954183    EDV45605.1    GDIQ01227900    JAK23825.1    LJIJ01000746    ODM94810.1    CVRI01000008    CRK88440.1   
Pfam
PF00400   WD40        + More
PF09384   UTP15_C
PF01553   Acyltransferase
Interpro
IPR036322   WD40_repeat_dom_sf        + More
IPR018983   U3_snoRNA-assocProt_15_C       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR001680   WD40_repeat       
IPR017986   WD40_repeat_dom       
IPR019775   WD40_repeat_CS       
IPR020472   G-protein_beta_WD-40_rep       
IPR018391   PQQ_beta_propeller_repeat       
IPR002123   Plipid/glycerol_acylTrfase       
IPR004552   AGP_acyltrans       
SUPFAM
SSF50978   SSF50978       
Gene 3D
PDB
5WLC     E-value=1.31278e-51,     Score=514

Ontologies

Topology

Length:
527
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00913999999999995
Exp number, first 60 AAs:
0.00435
Total prob of N-in:
0.00144
outside
1  -  527
 
 

Population Genetic Test Statistics

Pi
197.68272
Theta
192.431227
Tajima's D
-0.37947
CLR
0.060197
CSRT
0.275386230688466
Interpretation
Uncertain
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