SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO12512
Pre Gene Modal
BGIBMGA001508
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_phospholipase_A1_member_A-like_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 3.441
 

Sequence

CDS
ATGAAGTTCATATCGATACTATTGGTCACTTGGACGGTTTATCTGGCTGCAGCCGTGCCCGTCCAAGAGGATTCATTTCGTAAAGGAAATTACCCTCGTTACATTGAAATGCCGGACGGTGATGGAAATCTGCACACAGTAGATCTTGAAGCTACACCTGACTATGAACTTCTCGATGAAATAAACAGAAACCCTGCCAACAACCAGTACCTACTCTTCACCAGGCGCAATCGTCGTTCCTCCCAAACGTTGACTATCAACAATGCTAACTCCGTAACAAGATCCAACTTCAACGCCAACAACCCAACTGTTGTTATTGCTCATGGCTGGCTCAGCAACCAGAATACTGACATCAATCCGACCATCAGAGATGCTTACCTCGGCAAATCTGACGTGAACGTAATTGTTTTGGACTGGAGAAGACTTGCTCTGTCGGACTATGCTACTGCAGCTAGAGGAGTGCCCGCTGTCGGTCGCGGTTTGGGACAATTCTTGACGTTCCTTAATAGAGTAACAGGAGCTCCGTTCAACACCATGCATCTAGTTGGTTTCAGTCTGGGCGCGCATTTAGTTGGCAATGCTGGCCGTGAGCTCGGTGGACGGGTAGCTCGTGTTACCGGTTTGGACCCGGCCGGTCCTCTATGGAACACCAATTCTAATCGCCTTAATGCAAGAGATGGGGTTTACGTTGAGGCAATCCACACCGATGGCAGTACAACTGGTCTTGGCATCGGATCTGCTGTCGCCAACGCCGATTTCTTCCCGAACGGTGGAAACTCTCAGCCTGGTTGTACATTGAGCCTTTGCAACCACAATCGTGCTTGGGAACTATTTGCTTCAACCGTGACCAGAAATCATCTGGTCGGTAACCAGTGCAGCAACATGCTGCAGGTGTCTTCGAACTCGTGCCGCGGAAACCGTCTCAACATGGGAAATGACGACTTGAGAAAGAGCGGATCCGGACTCTTCAGAGTGAACACAGGCCGGAGATATCCCTTCTAA
Protein
MKFISILLVTWTVYLAAAVPVQEDSFRKGNYPRYIEMPDGDGNLHTVDLEATPDYELLDEINRNPANNQYLLFTRRNRRSSQTLTINNANSVTRSNFNANNPTVVIAHGWLSNQNTDINPTIRDAYLGKSDVNVIVLDWRRLALSDYATAARGVPAVGRGLGQFLTFLNRVTGAPFNTMHLVGFSLGAHLVGNAGRELGGRVARVTGLDPAGPLWNTNSNRLNARDGVYVEAIHTDGSTTGLGIGSAVANADFFPNGGNSQPGCTLSLCNHNRAWELFASTVTRNHLVGNQCSNMLQVSSNSCRGNRLNMGNDDLRKSGSGLFRVNTGRRYPF

Summary

Similarity
Belongs to the AB hydrolase superfamily. Lipase family.
EMBL
BABH01005987    NWSH01000166    PCG78877.1    GBRD01007078    JAG58743.1    PCG78876.1    + More
PCG78872.1    JF999956    AFI64310.1    KQ460622    KPJ13527.1    PCG78873.1    KQ459585    KPI98406.1    JF999960    AFI64314.1    ODYU01000727    SOQ35960.1    SOQ35962.1    GDQN01007598    JAT83456.1    GDQN01007206    JAT83848.1    JI484236    AEB26287.1    SOQ35961.1    GDQN01007430    JAT83624.1    JTDY01008208    KOB64678.1    PCG78875.1    KPJ13524.1    JF999954    AFI64308.1    KPI98407.1    JTDY01000484    KOB76966.1    PCG78874.1    KJ439229    AHX25880.1    AGBW02008213    OWR54002.1    BABH01005986    KPJ13523.1    KPI98345.1    RSAL01000128    RVE46507.1    GDQN01008225    JAT82829.1    RVE46508.1    NWSH01001649    PCG70553.1    JF999953    AFI64307.1    RSAL01000005    RVE54444.1    KJ638235    AIC80932.1    JI484231    AEB26282.1    KQ459602    KPI93582.1    PCG70552.1    KJ638234    AIC80931.1    KQ460870    KPJ11708.1    JF999961    AFI64315.1    JF303743    ADZ54059.1    GDQN01005586    JAT85468.1    NWSH01005705    PCG64026.1    KQ460106    KPJ17796.1    KPI93583.1    ODYU01011603    SOQ57446.1    HM357826    AEA76292.1    BABH01014242    BABH01014243    BABH01014244    BABH01014245    BABH01014246    EU325553    ACB54943.1    KPJ13522.1    AGBW02007744    OWR54624.1    JF999962    AFI64316.1    AB180932    BAD22559.1    PCG70554.1    RVE54443.1    PCG70555.1    HM357825    AEA76291.1    BABH01014247    GDQN01003467    JAT87587.1    KJ638233    AIC80930.1    KQ459589    KPI97552.1    AY945209    AAX39407.1    KPJ11707.1    PCG70557.1    PCG70559.1    PCG70558.1    KPJ17795.1    AGBW02009585    OWR50388.1    JTDY01001188    KOB74604.1    DQ149986    AAZ66799.1    MH246982    AZQ19986.1    DQ286554    AB076385    ABB90967.1    BAC00960.1    ODYU01001007    SOQ36620.1    OWR54623.1    ODYU01004467    SOQ44366.1    KPI97551.1    AY945212    EU700252    AAX39410.1    ACD80298.1    PCG70556.1    OWR54622.1    KPI98408.1    SOQ36622.1    JF999963    AFI64317.1    JI484235    AEB26286.1    JTDY01001937    KOB72495.1    SOQ36621.1    KQ459603    KPI92733.1    RVE54441.1    JTDY01003203    KOB69951.1    BABH01005609    DQ311228    ABD36173.1    KQ460883    KPJ11223.1    RSAL01000002    RVE55064.1   
Pfam
PF00151   Lipase        + More
PF00667   FAD_binding_1
PF00175   NAD_binding_1
Interpro
IPR029058   AB_hydrolase        + More
IPR013818   Lipase/vitellogenin       
IPR000734   TAG_lipase       
IPR033906   Lipase_N       
IPR002331   Lipase_panc       
IPR018357   Hexapep_transf_CS       
IPR017927   FAD-bd_FR_type       
IPR001433   OxRdtase_FAD/NAD-bd       
IPR023173   NADPH_Cyt_P450_Rdtase_alpha       
IPR017938   Riboflavin_synthase-like_b-brl       
IPR003097   CysJ-like_FAD-binding       
IPR039261   FNR_nucleotide-bd       
IPR001709   Flavoprot_Pyr_Nucl_cyt_Rdtase       
SUPFAM
SSF53474   SSF53474        + More
SSF52343   SSF52343       
SSF63380   SSF63380       
Gene 3D
PDB
1GPL     E-value=7.47042e-34,     Score=359

Ontologies

Topology

Subcellular location
Secreted  
SignalP
Position:   1 - 18,         Likelihood:  0.995930
 
 
Length:
333
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
3.48163
Exp number, first 60 AAs:
3.28139
Total prob of N-in:
0.16302
outside
1  -  333
 
 

Population Genetic Test Statistics

Pi
138.179622
Theta
160.223729
Tajima's D
-0.469631
CLR
134.933592
CSRT
0.244387780610969
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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