Gene

KWMTBOMO12509

Pre Gene Modal

BGIBMGA001505

Annotation

olfactory_receptor_42_[Bombyx_mori]

Location

Bomo_Chr21(+):5435612-5438429      View in EpiBrowser

Full name

Odorant receptor      

Location in the cell

PlasmaMembrane   Reliability : 4.075

CDS

ATGTTCATTAGATCAGCAATTAAGACTTTAGCCGTCAAATTTAACATATTATTATTTTCCATACTCGCCGAGGATTTGGAAAATATTTTCACAGCTCCAAACCTATTTAATGTTTTGATTGGATCCGTCGAAATTTGCGCACTTGGCTTCAATTTGATGATTGGCGATTTGACCCAAATACCTGGCTGCATTCTGTTCCTATCATCAGTATTGCTTCAAATTTTAATCATGAGTGTATTCGGGGAAAACTTAATTTCTGAGAGTAGCAGAATTGCCGAAGCTGCGTTTCTGTGCAAATGGTATGAAATGGACCAGAAATCCAAAAAGACTATTCTCACAATTATGATAAGATCGCATAAGCCCAAAAAACTAACTGCGTACAAGTTCTCAGTAATAAGTTACGGAAGTTTTAGCAAAGTGAGTAATTTATAA

Protein

MFIRSAIKTLAVKFNILLFSILAEDLENIFTAPNLFNVLIGSVEICALGFNLMIGDLTQIPGCILFLSSVLLQILIMSVFGENLISESSRIAEAAFLCKWYEMDQKSKKTILTIMIRSHKPKKLTAYKFSVISYGSFSKVSNL

Similarity

Belongs to the insect chemoreceptor superfamily. Heteromeric odorant receptor channel (TC 1.A.69) family.

Uniprot

Q0EEF7   A7E3I3   A2T874   A0A076E7N5   A0A0P1IVS6   A0A2H1V586   + More
A0A076E992   A0A2K8GKR2   A0A0S1TQS2   A0A1V1WCE5   A0A1B3B733   A0A075T2Y1   A0A2L1TG33   A0A3S2NR82   A0A097ITU9   A0A0B5GUV9   A0A1B3P5S0   A0A097IYJ4   A0A0B5CVM0   A0A2A4J9R4   A0A212EI70   A0A0K8TUT2   A0A437B7K6   A0A0E3VLQ7   A0A1S5XXP1   A0A0U3BLR7   A0A345BEW5   H9A5R0   A0A223HDD8   A0A223HD21   A0A146JYW4   A0A194Q4S1   A0A3S7SGM8   A0A0U2SQV8   A0A0P1IW06   A0A2L1TG84   B4JX07   A0A1V1WBW6   A0A0P1J430   A0A172QGF5   A0A172QGF4   A0A182FQJ2   R4JLY8   A0A075T622   B5A7F1   A0A3G1CJJ7   A0A146JXZ9   B0X4C4   A0A0B4ZWC0   R4JKH1   B4L5I1   A0A084VRY8   A0A0S1TPV5   Q16MN0   Q6A1K2   A0A2L1TG21   A0A1V1WC34   A0A2A4IUX3   A0A1S4FVR6   A0A0P1IVT0   A0A1B3B722   B4M2Z1   A0A0U2QG96   A0A0L0BPE9   A0A2H1VAZ7   D7F9H9   A0A075T7Y9   A0A2L1TG45   A0A2W1BUH6   A0A2A4K9L1   A0A386H919   A0A182J3P9   A0A1B3B742   D7F9H4   B4IV12   A0A1S5XXM4   D7F9H6   A0A182QWX8   D7F9I1   D7F9G5   A0A346D405   D7F9H7   D7F9H1   D7F9I4   A0A2K8GKR8   D7F9G4   A0A3S2LC57   A0A182T0F6   A0A1W4V8C0   A0A2L1TG31   A0A182KM23   A0A182VQZ4   A0A3G2LEK5   D7F9G6   D7F9H5   D7F9G9  

Pubmed

19427209    17257213    24998398    28736530    26812239    25027790    + More
25252791    27538507    22118469    26017144    23950722    26657286    29727827    22363688    27006164    28150741    26354079    17994087    27163122    24632377    28756777    26543554    24438588    17635615    17510324    15289611    18057021    26108605    17550304    30058747    20966253   

EMBL

AB234353    AB472120    BAF31193.1    BAH66338.1    BK005948    DAA05998.1    + More
DQ991158    ABK27852.1    KF487704    AII01102.1    LN885117    CUQ99406.1    ODYU01000727    SOQ35959.1    KF487660    AII01058.1    KX585332    ARO70225.1    KR935739    ALM26231.1    GENK01000062    JAV45851.1    KT588117    AOE48027.1    KF768689    AIG51883.1    KY707192    AVF19634.1    RSAL01000128    RVE46509.1    KM597215    AIT69892.1    KM892389    AJF23804.1    KX655975    AOG12924.1    KM655552    AIT72002.1    KM678315    AJE25888.1    NWSH01002232    PCG68867.1    AGBW02014689    OWR41178.1    GCVX01000199    JAI18031.1    RVE46506.1    LC002739    BAR43487.1    KY399287    AQQ73518.1    KP975151    ALT31670.1    MG816604    AXF48789.1    JN836710    AFC91750.2    KY283741    AST36400.1    KY283613    AST36272.1    GEDO01000035    JAP88591.1    KQ459585    KPI98405.1    MF625563    AXY83390.1    KP975143    ALT31662.1    LN885103    CUQ99392.1    KY707223    AVF19665.1    CH916376    EDV95283.1    GENK01000060    JAV45853.1    LN885124    CUQ99413.1    KT962962    AND95945.1    KT962963    AND95946.1    JX982529    AGK90004.1    KF768666    KZ150109    AIG51860.1    PZC73368.1    EU818704    ACF32963.1    KT022418    ALV83717.1    GEDO01000041    JAP88585.1    DS232337    EDS40277.1    KJ542666    AJD81550.1    JX982543    AGK90018.1    CH933811    EDW06440.1    ATLV01015787    KE525036    KFB40732.1    KR935722    ALM26214.1    BK006143    CH477856    DAA80358.1    EAT35587.2    AJ748327    CAG38113.1    KY707182    AVF19624.1    GENK01000087    JAV45826.1    NWSH01006314    PCG63521.1    LN885127    CUQ99416.1    KT588107    AOE48017.1    CH940651    EDW65166.1    KRF82054.1    KP975146    ALT31665.1    JRES01001567    KNC21960.1    ODYU01001579    SOQ37997.1    FN422896    CBA14050.1    KF768688    AIG51882.1    KY707205    AVF19647.1    KZ149944    PZC76857.1    NWSH01000040    PCG80352.1    MG546625    AYD42248.1    KT588128    AOE48038.1    FN422891    CBA14045.1    CH892485    EDX00226.2    KY399274    AQQ73505.1    FN422893    CBA14047.1    AXCN02000191    FN422898    CBA14052.1    FN422882    CBA14036.1    MG859347    AXM05175.1    FN422894    CBA14048.1    FN422888    CBA14042.1    FN422901    CBA14055.1    KX585334    ARO70227.1    FN422881    CBA14035.1    RSAL01000049    RVE50410.1    KY707181    AVF19623.1    MH937260    AYN70675.1    FN422883    CBA14037.1    FN422892    FN422895    FN422897    CBA14046.1    CBA14049.1    CBA14051.1    FN422886    CBA14040.1   

Proteomes

UP000283053    UP000218220    UP000007151    UP000053268    UP000001070    UP000069272    + More
UP000002320    UP000009192    UP000030765    UP000008820    UP000008792    UP000037069    UP000075880    UP000002282    UP000075886    UP000075901    UP000192221    UP000075882    UP000075920   

PRIDE

Q0EEF7    A7E3I3    A2T874   

Pfam

PF02949   7tm_6

Interpro

IPR004117   7tm6_olfct_rcpt       

ProteinModelPortal

Q0EEF7   A7E3I3   A2T874   A0A076E7N5   A0A0P1IVS6   A0A2H1V586   + More
A0A076E992   A0A2K8GKR2   A0A0S1TQS2   A0A1V1WCE5   A0A1B3B733   A0A075T2Y1   A0A2L1TG33   A0A3S2NR82   A0A097ITU9   A0A0B5GUV9   A0A1B3P5S0   A0A097IYJ4   A0A0B5CVM0   A0A2A4J9R4   A0A212EI70   A0A0K8TUT2   A0A437B7K6   A0A0E3VLQ7   A0A1S5XXP1   A0A0U3BLR7   A0A345BEW5   H9A5R0   A0A223HDD8   A0A223HD21   A0A146JYW4   A0A194Q4S1   A0A3S7SGM8   A0A0U2SQV8   A0A0P1IW06   A0A2L1TG84   B4JX07   A0A1V1WBW6   A0A0P1J430   A0A172QGF5   A0A172QGF4   A0A182FQJ2   R4JLY8   A0A075T622   B5A7F1   A0A3G1CJJ7   A0A146JXZ9   B0X4C4   A0A0B4ZWC0   R4JKH1   B4L5I1   A0A084VRY8   A0A0S1TPV5   Q16MN0   Q6A1K2   A0A2L1TG21   A0A1V1WC34   A0A2A4IUX3   A0A1S4FVR6   A0A0P1IVT0   A0A1B3B722   B4M2Z1   A0A0U2QG96   A0A0L0BPE9   A0A2H1VAZ7   D7F9H9   A0A075T7Y9   A0A2L1TG45   A0A2W1BUH6   A0A2A4K9L1   A0A386H919   A0A182J3P9   A0A1B3B742   D7F9H4   B4IV12   A0A1S5XXM4   D7F9H6   A0A182QWX8   D7F9I1   D7F9G5   A0A346D405   D7F9H7   D7F9H1   D7F9I4   A0A2K8GKR8   D7F9G4   A0A3S2LC57   A0A182T0F6   A0A1W4V8C0   A0A2L1TG31   A0A182KM23   A0A182VQZ4   A0A3G2LEK5   D7F9G6   D7F9H5   D7F9G9  

PDB

6C70     E-value=1.77186e-06,     Score=117

KEGG

778524    K22984 odorant receptor | (RefSeq) Or-42, BmOR21, BmOr-42, Or21, Or42; olfactory receptor 42

GO

GO:0005886   GO:0005549   GO:0004984   GO:0007165   GO:0016021   GO:0007608   GO:0016020   GO:0008270   GO:0045211   GO:0005975   GO:0004553  

PANTHER

PTHR21137  

Subcellular location

Cell membrane  

Length:

143

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

38.32269

Exp number, first 60 AAs:

19.58522

Total prob of N-in:

0.70633

POSSIBLE N-term signal

sequence

inside

1  -  34

TMhelix

35  -  54

outside

55  -  63

TMhelix

64  -  86

inside

87  -  143

 

 

Pi

235.750402

Theta

207.331323

Tajima's D

0.431513

CLR

0

CSRT

0.498525073746313

Interpretation

Uncertain