Gene

KWMTBOMO12508

Pre Gene Modal

BGIBMGA001505

Annotation

olfactory_receptor_42_[Bombyx_mori]

Location

Bomo_Chr21(+):5433352-5434566      View in EpiBrowser

Full name

Odorant receptor      

Location in the cell

PlasmaMembrane   Reliability : 4.594

CDS

ATGGACATACCGAAATTCGAAGAGCTTTTGAAACAAATCAAAATGAATTTCTGGCTAATGGGAATCCCGTTTGACAATCCGAAAATACAAATAAGATATTACGTGCTATTATTACCTCTGTCGCTTATGTTGATCGAGGAAATTGCATTTTTCGGTTCGAGAATGTCGTCGGAGAATTTTCTGGAACTAACACAATTAGCACCCTGCATTTGCATCGGGGTGCTGTCTGTATTAAAAATCTTAGCTTTAACAGCGAAAAGACAAAAAATTTACGAGTTGACTCAGAATCTTGAATGTCTTCACAAAATTATTTTAAACGACACCAGGAAGACGGAGCTTGTGAGAAAGAATCTTGTTCTCATAAAGTTCATAACGAAGTATTTCTTCGTTTTGAACGCCGTCCTCATTTTCGTTTACAATTTTTCGTCTCCAGTCATCATAGCGTATAATTATATTGTTAGTAACGAGGTTCAGTTCGTTCTGCCCTATGCGGTACTGTTGCCTTTTAAAACTGATTCCTGGATCCCGTGGCTTATTGTATACGTATATTCCATCTTCTGTGGGTTCACGTGTGTGTTATATTACGCAACAGTTGACGTACTTTACTGTGTTATGACTTCGCTCGTGTGCAACAATTTCTCGCTAATTAGCTTCAAACTTCAGAAAGTAAATAGAAACACGGCCCATTTACTAAAAGAGGTCGTGAAGGAGCAACAGTACGTATTAAAGTAA

Protein

MDIPKFEELLKQIKMNFWLMGIPFDNPKIQIRYYVLLLPLSLMLIEEIAFFGSRMSSENFLELTQLAPCICIGVLSVLKILALTAKRQKIYELTQNLECLHKIILNDTRKTELVRKNLVLIKFITKYFFVLNAVLIFVYNFSSPVIIAYNYIVSNEVQFVLPYAVLLPFKTDSWIPWLIVYVYSIFCGFTCVLYYATVDVLYCVMTSLVCNNFSLISFKLQKVNRNTAHLLKEVVKEQQYVLK

Similarity

Belongs to the insect chemoreceptor superfamily. Heteromeric odorant receptor channel (TC 1.A.69) family.

Feature

chain  Odorant receptor

Uniprot

Q0EEF7   A7E3I3   A0A0P1IVS6   A0A2K8GKR2   A0A076E992   A0A076E7N5   + More
A0A2H1V586   A0A2L1TG33   A0A212EI70   A0A1B3B733   A0A0S1TQS2   A0A1Y9TJT3   A0A146JYW4   A0A0E3VLQ7   A0A223HD21   A0A0K8TUT2   A0A0B5CVM0   A0A3S2L618   A0A345BEW5   A0A0B5GUV9   A0A097IYJ4   A0A1B3P5S0   A0A223HD75   A0A223HDD8   H9A5R0   A0A437B7K6   A0A097ITU9   A0A3S7SGM8   A0A0P1IVT0   A0A0P1J430   A0A146JVP9   A0A1Y9TJI6   A0A182N5Z0   A0A182PC38   A0A1B3B742   A0A1B2G2M4   A0A182T0F6   Q7PUT5   A0A182I0E0   A0A182TQB5   A7E3G7   B0WLK1   A0A182YJS6   A0A0P1IW06   A0A182XBK1   C4B7V5   A0A182R1K2   A0A182V3T1   A0A0S1TKX5   A0A182QWX8   Q16MN0   A0A1S4FVR6   A0A3G1CJJ7   B0X4D4   A0A182GB83   B0X4C4   A0A182VQZ4   H9A5N0   A0A0L7L1C3   A0A0E3VLQ3   A0A0P1IW02   H9JW51   A0A3G2KX57   A0A0N7MCA7   A0A0E4B5I0   A0A182MBR6   A0A182QND3   A0A182FQJ2   A0A084VRY8   W5J289   C4B7U4   A7E3F6   A0A076E621   A0A182J3P9   A0A076EDH7   A0A076EDF5   A0A076E9C3   A0A1B3B722   R4JUT8   A0A2A4K9L1   Q6A1K2   A0A075T619   A0A146JVN1   A0A1B3P5S4   A0A2K8GKS4   B4QS49   A0A075T622   A0A2L1TG31   A0A2L1TG21   A0A172QGF4  

Pubmed

19427209    17257213    28736530    24998398    22118469    26812239    + More
28150741    26017144    29727827    25252791    27538507    22363688    27006164    12364791    14747013    17210077    25244985    17635615    17510324    26543554    26483478    26227816    19121390    30319455    24438588    20920257    23761445    24632377    15289611    25027790    17994087    28756777    27163122   

EMBL

AB234353    AB472120    BAF31193.1    BAH66338.1    BK005948    DAA05998.1    + More
LN885117    CUQ99406.1    KX585332    ARO70225.1    KF487660    AII01058.1    KF487704    AII01102.1    ODYU01000727    SOQ35959.1    KY707192    AVF19634.1    AGBW02014689    OWR41178.1    KT588117    AOE48027.1    KR935739    ALM26231.1    KX084493    ARO76448.1    GEDO01000035    JAP88591.1    LC002739    BAR43487.1    KY283613    AST36272.1    GCVX01000199    JAI18031.1    KM678315    AJE25888.1    RSAL01000128    RVE46510.1    MG816604    AXF48789.1    KM892389    AJF23804.1    KM655552    AIT72002.1    KX655975    AOG12924.1    KY283664    AST36323.1    KY283741    AST36400.1    JN836710    AFC91750.2    RVE46506.1    KM597215    AIT69892.1    MF625563    AXY83390.1    LN885127    CUQ99416.1    LN885124    CUQ99413.1    GEDO01000033    JAP88593.1    KX084475    ARO76430.1    KT588128    AOE48038.1    KU598892    ANZ03138.1    AAAB01008987    EAA01023.2    APCN01002072    BK005932    DAA05982.1    DS231987    EDS30531.1    LN885103    CUQ99392.1    AB472104    BAH66321.1    KR935710    ALM26202.1    AXCN02000191    BK006143    CH477856    DAA80358.1    EAT35587.2    KT022418    ALV83717.1    DS232337    EDS40287.1    JXUM01054212    KQ561810    KXJ77458.1    EDS40277.1    JN836680    AFC91720.2    JTDY01003652    KOB69210.1    LC002719    BAR43467.1    LN885105    CUQ99394.1    BABH01025352    MH723598    AYN64401.1    LN885132    CUQ99421.1    LC002721    BAR43469.1    AXCM01002463    AXCN02000497    ATLV01015787    KE525036    KFB40732.1    ADMH02002134    ETN58372.1    AB472093    BAH66310.1    BK005921    DAA05971.1    KF487703    AII01101.1    KF487702    AII01100.1    KF487677    AII01075.1    KF487701    AII01099.1    KT588107    AOE48017.1    JX982526    AGK90001.1    NWSH01000040    PCG80352.1    AJ748327    CAG38113.1    KF768661    AIG51855.1    GEDO01000053    JAP88573.1    KX656001    AOG12950.1    KX585344    ARO70237.1    CM000364    EDX12245.1    KF768666    KZ150109    AIG51860.1    PZC73368.1    KY707181    AVF19623.1    KY707182    AVF19624.1    KT962963    AND95946.1   

Proteomes

UP000007151    UP000283053    UP000075884    UP000075885    UP000075901    UP000007062    + More
UP000075840    UP000075902    UP000002320    UP000076408    UP000076407    UP000075900    UP000075903    UP000075886    UP000008820    UP000069940    UP000249989    UP000075920    UP000037510    UP000005204    UP000075883    UP000069272    UP000030765    UP000000673    UP000075880    UP000218220    UP000000304   

PRIDE

Q0EEF7    A7E3I3    A7E3G7    C4B7V5    H9JW51    C4B7U4    + More
A7E3F6   

Pfam

PF02949   7tm_6

Interpro

IPR004117   7tm6_olfct_rcpt       

ProteinModelPortal

Q0EEF7   A7E3I3   A0A0P1IVS6   A0A2K8GKR2   A0A076E992   A0A076E7N5   + More
A0A2H1V586   A0A2L1TG33   A0A212EI70   A0A1B3B733   A0A0S1TQS2   A0A1Y9TJT3   A0A146JYW4   A0A0E3VLQ7   A0A223HD21   A0A0K8TUT2   A0A0B5CVM0   A0A3S2L618   A0A345BEW5   A0A0B5GUV9   A0A097IYJ4   A0A1B3P5S0   A0A223HD75   A0A223HDD8   H9A5R0   A0A437B7K6   A0A097ITU9   A0A3S7SGM8   A0A0P1IVT0   A0A0P1J430   A0A146JVP9   A0A1Y9TJI6   A0A182N5Z0   A0A182PC38   A0A1B3B742   A0A1B2G2M4   A0A182T0F6   Q7PUT5   A0A182I0E0   A0A182TQB5   A7E3G7   B0WLK1   A0A182YJS6   A0A0P1IW06   A0A182XBK1   C4B7V5   A0A182R1K2   A0A182V3T1   A0A0S1TKX5   A0A182QWX8   Q16MN0   A0A1S4FVR6   A0A3G1CJJ7   B0X4D4   A0A182GB83   B0X4C4   A0A182VQZ4   H9A5N0   A0A0L7L1C3   A0A0E3VLQ3   A0A0P1IW02   H9JW51   A0A3G2KX57   A0A0N7MCA7   A0A0E4B5I0   A0A182MBR6   A0A182QND3   A0A182FQJ2   A0A084VRY8   W5J289   C4B7U4   A7E3F6   A0A076E621   A0A182J3P9   A0A076EDH7   A0A076EDF5   A0A076E9C3   A0A1B3B722   R4JUT8   A0A2A4K9L1   Q6A1K2   A0A075T619   A0A146JVN1   A0A1B3P5S4   A0A2K8GKS4   B4QS49   A0A075T622   A0A2L1TG31   A0A2L1TG21   A0A172QGF4  

KEGG

778524    K22984 odorant receptor | (RefSeq) Or-42, BmOR21, BmOr-42, Or21, Or42; olfactory receptor 42

GO

GO:0005886   GO:0005549   GO:0004984   GO:0007165   GO:0016021   GO:0007608   GO:0050911   GO:0016020   GO:0008270   GO:0045211   GO:0005975   GO:0004553  

PANTHER

PTHR21137  

Subcellular location

Cell membrane  

Length:

243

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

99.84826

Exp number, first 60 AAs:

19.07526

Total prob of N-in:

0.90819

POSSIBLE N-term signal

sequence

inside

1  -  30

TMhelix

31  -  53

outside

54  -  62

TMhelix

63  -  85

inside

86  -  126

TMhelix

127  -  149

outside

150  -  173

TMhelix

174  -  196

inside

197  -  243

 

 

Pi

183.641041

Theta

220.027111

Tajima's D

-0.390621

CLR

5.927863

CSRT

0.265386730663467

Interpretation

Uncertain