Gene

KWMTBOMO12506

Pre Gene Modal

BGIBMGA009389

Annotation

PREDICTED:_mucin-2-like_[Amyelois_transitella]

Location

Bomo_Chr21(+):5423712-5424670      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.049

CDS

ATGGCTGGAAGTTACATTGTCAACGTGCCTAAATTGAAAGGTCGCGAAAACTTCGACGAGTGGGCGTTTGCAGCTGAACATTTTTTGATGTTGGAAGGTGTCGATATTCATAAGTTAGAATCGTCAACCGATGCTAGTTCTATTGATGAAAGAAAAGCTAAAGCTAAACTTATTATGACAATTGACTCTTCAATTTATGTTCACATTAAAAACGAGCAAACAGTACAAGGTGTGTGGAAGCGTTTAAAAGCCCTGTACGATGACTGTGGCTTTACGCGTCGCATCAGTCTACTTCGTCAGCTAATATCAATTCGATTAGAAGACAGCGAATCAATGGAAGCATATGTAACGCAAATGGTCGACACTGCACAAAAACTTAAAGGTACGGGTTTTCAGATCACTGATGAGTGGATCGGTTCACTATTATTAGCGGGCCTAACAGATACATTTGCTCCTATGATAATGGCCATTGAACATTCTGGATTAGCCATCAGTACGGATGCCATCAAGTCAAAATTACTGGACATGAGTTCAGAAGTTGGCAACACTGCAACTAACAATGCCTTTTTGTCGAAAGGTTGGCAGCACCGGAACAAGAAAAAAGGACTCAGGCGCAAGCTCACATATGATAACAGAAAAGAGTTGCTTACAGAATGTTTCCTATAA

Protein

MAGSYIVNVPKLKGRENFDEWAFAAEHFLMLEGVDIHKLESSTDASSIDERKAKAKLIMTIDSSIYVHIKNEQTVQGVWKRLKALYDDCGFTRRISLLRQLISIRLEDSESMEAYVTQMVDTAQKLKGTGFQITDEWIGSLLLAGLTDTFAPMIMAIEHSGLAISTDAIKSKLLDMSSEVGNTATNNAFLSKGWQHRNKKKGLRRKLTYDNRKELLTECFL

Uniprot

A0A2H1X3Q4   A0A2H1WQ59   A0A212F7V4   A0A2H1WW51   A0A1Y1N677   A0A1E1WHM3   + More
A0A2H1V043   A0A1Y1N6L8   A0A1Y1N668   A0A1Y1N932   A0A2H1X258   A0A0A9Z2K2   A0A2A4JRI1   A0A3L8DS90   W4VRQ4   A0A0P6K155   A0A0J7K7C8   A0A1E1WH48   A0A2A4J959   A0A194RU38   A0A0J7JZV2   A0A182GZK6   A0A0A9X9I5   H9JND2   A0A1B6E9D0   A0A1Y1LWI3   A0A0J7K1U9   A0A3L8D826   A0A0A9W8L1   W4VRP9   A0A0J7NHJ8   W4VRP2   A0A2H1VGX3   A0A0A9YKS3   A0A0A9XCL0   A0A0J7MS03   A0A0A9XEY5   A0A224XHZ7   A0A0J7N4R7   A0A0A9Z9B6   A0A0A9ZER2   A0A0J7N3H6   A0A026WQ65   A0A194RJV9   A0A224XA26   A0A0J7KAH3   A0A0A1WXQ3   A0A0A9YWZ9   A0A026VU99   A0A0J7KK14   A0A0J7K9Y8   A0A0A9Y7E3   A0A034V012   A0A0A9XVJ9   A0A0A9WPH5   A0A0A9WRE3   A0A0A9W9K3   A0A0A9WBI3   A0A2A4K3A2   A0A0A9XZF1   A0A2W1BXU7   A0A437BGC2   A0A1Y1LX65   A0A0J7KCB5   A0A1I8NJG4   A0A1W7R6J6   A0A1W7R6K6   K7JXA3   A0A0J7N2D7   A0A0L7K8U3   A0A034VP70   A0A0L7LJJ1   A0A0J7K5G8   A0A1W7R670   A0A1W7R663   A0A2H1WMK4   A0A0A9YFM0   A0A3L8DXI8   A0A151I9Q8   A0A0A9WQD4  

Pubmed

22118469    28004739    25401762    30249741    26999592    26354079    + More
26483478    19121390    24508170    25830018    25348373    28756777    25315136    20075255    26227816   

EMBL

ODYU01013273    SOQ59980.1    ODYU01010175    SOQ55116.1    AGBW02009826    OWR49812.1    + More
ODYU01011515    SOQ57290.1    GEZM01011859    GEZM01011855    JAV93394.1    GDQN01004560    JAT86494.1    ODYU01000075    SOQ34223.1    GEZM01011858    GEZM01011854    JAV93389.1    GEZM01011856    JAV93393.1    GEZM01011857    JAV93390.1    ODYU01012902    SOQ59440.1    GBHO01007564    JAG36040.1    NWSH01000816    PCG74073.1    QOIP01000004    RLU23300.1    GANO01000510    JAB59361.1    GDUN01000078    JAN95841.1    LBMM01012652    KMQ86076.1    GDQN01004734    JAT86320.1    NWSH01002292    PCG68657.1    PCG68658.1    KQ459875    KPJ19636.1    LBMM01019247    KMQ83577.1    JXUM01099713    KQ564513    KXJ72145.1    GBHO01029844    JAG13760.1    BABH01019436    GEDC01002834    JAS34464.1    GEZM01045162    JAV77889.1    LBMM01016836    KMQ84297.1    QOIP01000011    RLU16434.1    GBHO01042434    JAG01170.1    GANO01000659    JAB59212.1    LBMM01004924    KMQ91985.1    GANO01000660    JAB59211.1    ODYU01002507    SOQ40093.1    GBHO01011901    JAG31703.1    GBHO01026223    JAG17381.1    LBMM01020445    KMQ83285.1    GBHO01026221    JAG17383.1    GFTR01004319    JAW12107.1    LBMM01010129    KMQ87655.1    GBHO01001742    JAG41862.1    GBHO01001741    JAG41863.1    LBMM01010768    KMQ87255.1    KK107132    EZA58140.1    KQ460297    KPJ16236.1    GFTR01008662    JAW07764.1    LBMM01010791    KMQ87231.1    GBXI01011094    JAD03198.1    GBHO01007463    JAG36141.1    KK107871    EZA47378.1    LBMM01006235    KMQ90788.1    LBMM01010958    KMQ87117.1    GBHO01016596    JAG27008.1    GAKP01023107    JAC35849.1    GBHO01020706    JAG22898.1    GBHO01033237    JAG10367.1    GBHO01033235    JAG10369.1    GBHO01038507    JAG05097.1    GBHO01038505    JAG05099.1    NWSH01000234    PCG78150.1    GBHO01020974    JAG22630.1    KZ149913    PZC78057.1    RSAL01000063    RVE49487.1    GEZM01044588    JAV78134.1    LBMM01009660    KMQ87962.1    GEHC01000868    JAV46777.1    GEHC01000867    JAV46778.1    LBMM01011462    KMQ86820.1    JTDY01010240    KOB59525.1    GAKP01015352    JAC43600.1    JTDY01000892    KOB75534.1    LBMM01013295    KMQ85718.1    GEHC01000989    JAV46656.1    GEHC01000988    JAV46657.1    ODYU01009608    SOQ54162.1    GBHO01011746    GBHO01011744    GBHO01011742    JAG31858.1    JAG31860.1    JAG31862.1    QOIP01000003    RLU25147.1    KQ978269    KYM95809.1    GBHO01036544    JAG07060.1   

Proteomes

UP000007151    UP000218220    UP000279307    UP000036403    UP000053240    UP000069940    + More
UP000249989    UP000005204    UP000053097    UP000283053    UP000095301    UP000002358    UP000037510    UP000078542   

PRIDE

H9JND2   

Pfam

PF13976   gag_pre-integrs        + More
PF00098   zf-CCHC
PF00665   rve
PF07727   RVT_2
PF13961   DUF4219
PF16682   MSL2-CXC
PF17906   HTH_48

Interpro

IPR001878   Znf_CCHC        + More
IPR036875   Znf_CCHC_sf       
IPR025724   GAG-pre-integrase_dom       
IPR036397   RNaseH_sf       
IPR001584   Integrase_cat-core       
IPR039537   Retrotran_Ty1/copia-like       
IPR012337   RNaseH-like_sf       
IPR013103   RVT_2       
IPR025314   DUF4219       
IPR032049   Msl2-CXC       
IPR033467   Tesmin/TSO1-like_CXC       
IPR037922   MSL2       
IPR041426   Mos1_HTH       

SUPFAM

SSF57756   SSF57756        + More
SSF53098   SSF53098       

Gene 3D

3.30.420.10    

CDD

cd13122  MSL2_CXC

ProteinModelPortal

A0A2H1X3Q4   A0A2H1WQ59   A0A212F7V4   A0A2H1WW51   A0A1Y1N677   A0A1E1WHM3   + More
A0A2H1V043   A0A1Y1N6L8   A0A1Y1N668   A0A1Y1N932   A0A2H1X258   A0A0A9Z2K2   A0A2A4JRI1   A0A3L8DS90   W4VRQ4   A0A0P6K155   A0A0J7K7C8   A0A1E1WH48   A0A2A4J959   A0A194RU38   A0A0J7JZV2   A0A182GZK6   A0A0A9X9I5   H9JND2   A0A1B6E9D0   A0A1Y1LWI3   A0A0J7K1U9   A0A3L8D826   A0A0A9W8L1   W4VRP9   A0A0J7NHJ8   W4VRP2   A0A2H1VGX3   A0A0A9YKS3   A0A0A9XCL0   A0A0J7MS03   A0A0A9XEY5   A0A224XHZ7   A0A0J7N4R7   A0A0A9Z9B6   A0A0A9ZER2   A0A0J7N3H6   A0A026WQ65   A0A194RJV9   A0A224XA26   A0A0J7KAH3   A0A0A1WXQ3   A0A0A9YWZ9   A0A026VU99   A0A0J7KK14   A0A0J7K9Y8   A0A0A9Y7E3   A0A034V012   A0A0A9XVJ9   A0A0A9WPH5   A0A0A9WRE3   A0A0A9W9K3   A0A0A9WBI3   A0A2A4K3A2   A0A0A9XZF1   A0A2W1BXU7   A0A437BGC2   A0A1Y1LX65   A0A0J7KCB5   A0A1I8NJG4   A0A1W7R6J6   A0A1W7R6K6   K7JXA3   A0A0J7N2D7   A0A0L7K8U3   A0A034VP70   A0A0L7LJJ1   A0A0J7K5G8   A0A1W7R670   A0A1W7R663   A0A2H1WMK4   A0A0A9YFM0   A0A3L8DXI8   A0A151I9Q8   A0A0A9WQD4  

KEGG

NA   

GO

GO:0008270   GO:0003676   GO:0015074   GO:0000943   GO:0061630   GO:0072487   GO:0016021   GO:0016301  

PANTHER

PTHR11439   PTHR16048  

Length:

221

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.2592

Exp number, first 60 AAs:

0.00015

Total prob of N-in:

0.05072

outside

1  -  221

 

 

Pi

47.417552

Theta

55.64954

Tajima's D

-0.415899

CLR

3.289916

CSRT

0.263986800659967

Interpretation

Uncertain